RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 CXCL9Q07325 125 aa15.37■□□□□ 0.05
SEMA4B-205ENST00000558848 DDX46Q7L014 1031 aaKnown RBP15.37■□□□□ 0.05
SEMA4B-205ENST00000558848 TMC4Q7Z404 712 aa15.37■□□□□ 0.05
SEMA4B-205ENST00000558848 GPRC5DQ9NZD1 345 aa15.37■□□□□ 0.05
SEMA4B-205ENST00000558848 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
SEMA4B-205ENST00000558848 DUOX1Q9NRD9 1551 aa15.36■□□□□ 0.05
SEMA4B-205ENST00000558848 LMOD1P29536 600 aaPredicted RBP15.36■□□□□ 0.05
SEMA4B-205ENST00000558848 DPP8Q6V1X1 898 aaPredicted RBP15.36■□□□□ 0.05
SEMA4B-205ENST00000558848 MPNDQ8N594 471 aa15.36■□□□□ 0.05
SEMA4B-205ENST00000558848 TMX4Q9H1E5 349 aaPredicted RBP15.36■□□□□ 0.05
SEMA4B-205ENST00000558848 IFT57Q9NWB7 429 aa15.36■□□□□ 0.05
SEMA4B-205ENST00000558848 LRRC37AA6NMS7 1700 aa15.36■□□□□ 0.05
SEMA4B-205ENST00000558848 APAF1O14727 1248 aa15.35■□□□□ 0.05
SEMA4B-205ENST00000558848 TNS4Q8IZW8 715 aa15.35■□□□□ 0.05
SEMA4B-205ENST00000558848 FAM89AQ96GI7 184 aa15.35■□□□□ 0.05
SEMA4B-205ENST00000558848 PGAP2Q9UHJ9 254 aa15.35■□□□□ 0.05
SEMA4B-205ENST00000558848 CDHR2Q9BYE9 1310 aa15.35■□□□□ 0.05
SEMA4B-205ENST00000558848 DDX60Q8IY21 1712 aaKnown RBP15.34■□□□□ 0.05
SEMA4B-205ENST00000558848 ADARB2Q9NS39 739 aaKnown RBP15.34■□□□□ 0.05
SEMA4B-205ENST00000558848 WBP1LQ9NX94 342 aa15.34■□□□□ 0.05
SEMA4B-205ENST00000558848 COL4A1P02462 1669 aa15.33■□□□□ 0.04
SEMA4B-205ENST00000558848 YDJCA8MPS7 323 aa15.33■□□□□ 0.04
SEMA4B-205ENST00000558848 ATP5J2-PTCD1G3V325 749 aa15.33■□□□□ 0.04
SEMA4B-205ENST00000558848 FOXN1O15353 648 aa15.33■□□□□ 0.04
SEMA4B-205ENST00000558848 GNAI1P63096 354 aa15.33■□□□□ 0.04
SEMA4B-205ENST00000558848 DEFB115Q30KQ5 88 aa15.33■□□□□ 0.04
SEMA4B-205ENST00000558848 CST9Q5W186 159 aa15.33■□□□□ 0.04
SEMA4B-205ENST00000558848 CELF1Q92879 486 aaKnown RBP15.33■□□□□ 0.04
SEMA4B-205ENST00000558848 GMPSP49915 693 aaPredicted RBP15.32■□□□□ 0.04
SEMA4B-205ENST00000558848 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
SEMA4B-205ENST00000558848 FMR1Q06787 632 aaKnown RBP eCLIP15.32■□□□□ 0.04
SEMA4B-205ENST00000558848 CIAPIN1Q6FI81 312 aa15.32■□□□□ 0.04
SEMA4B-205ENST00000558848 PHAXQ9H814 394 aaKnown RBP15.32■□□□□ 0.04
SEMA4B-205ENST00000558848 HIRAP54198 1017 aaPredicted RBP15.31■□□□□ 0.04
SEMA4B-205ENST00000558848 ZBTB38Q8NAP3 1195 aaPredicted RBP15.31■□□□□ 0.04
SEMA4B-205ENST00000558848 C8orf58Q8NAV2 365 aa15.31■□□□□ 0.04
SEMA4B-205ENST00000558848 ZC3H15Q8WU90 426 aaKnown RBP15.31■□□□□ 0.04
SEMA4B-205ENST00000558848 PRDM10Q9NQV6 1147 aa15.31■□□□□ 0.04
SEMA4B-205ENST00000558848 IRS4O14654 1257 aaPredicted RBP15.3■□□□□ 0.04
SEMA4B-205ENST00000558848 TAF1P21675 1872 aa15.3■□□□□ 0.04
SEMA4B-205ENST00000558848 TNIP1Q15025 636 aa15.3■□□□□ 0.04
SEMA4B-205ENST00000558848 ZNF428Q96B54 188 aa15.3■□□□□ 0.04
SEMA4B-205ENST00000558848 WDR33Q9C0J8 1336 aaKnown RBP15.3■□□□□ 0.04
SEMA4B-205ENST00000558848 POLLQ9UGP5 575 aa15.3■□□□□ 0.04
SEMA4B-205ENST00000558848 THSD7BQ9C0I4 1608 aa15.29■□□□□ 0.04
SEMA4B-205ENST00000558848 TRAF5O00463 557 aa15.29■□□□□ 0.04
SEMA4B-205ENST00000558848 RAD17O75943 681 aa15.29■□□□□ 0.04
SEMA4B-205ENST00000558848 CCDC191Q8NCU4 936 aa15.29■□□□□ 0.04
SEMA4B-205ENST00000558848 DPF2Q92785 391 aa15.29■□□□□ 0.04
SEMA4B-205ENST00000558848 PODXL2Q9NZ53 605 aa15.29■□□□□ 0.04
SEMA4B-205ENST00000558848 TLL2Q9Y6L7 1015 aa15.29■□□□□ 0.04
SEMA4B-205ENST00000558848 ELL2O00472 640 aaPredicted RBP15.28■□□□□ 0.04
SEMA4B-205ENST00000558848 PCCAP05165 728 aaPredicted RBP15.28■□□□□ 0.04
SEMA4B-205ENST00000558848 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
SEMA4B-205ENST00000558848 RPS8P62241 208 aaKnown RBP15.28■□□□□ 0.04
SEMA4B-205ENST00000558848 GPSM2P81274 684 aa15.28■□□□□ 0.04
SEMA4B-205ENST00000558848 GOLGA2Q08379 1002 aa15.28■□□□□ 0.04
SEMA4B-205ENST00000558848 CCDC27Q2M243 656 aa15.28■□□□□ 0.04
SEMA4B-205ENST00000558848 WASHC4Q2M389 1173 aa15.28■□□□□ 0.04
SEMA4B-205ENST00000558848 RIC3Q7Z5B4 369 aa15.28■□□□□ 0.04
SEMA4B-205ENST00000558848 NSFL1CQ9UNZ2 370 aaKnown RBP15.28■□□□□ 0.04
SEMA4B-205ENST00000558848 NCBP3Q53F19 620 aaKnown RBP15.27■□□□□ 0.04
SEMA4B-205ENST00000558848 RTL5Q5HYW3 569 aaPredicted RBP15.27■□□□□ 0.04
SEMA4B-205ENST00000558848 TSPYL6Q8N831 410 aa15.27■□□□□ 0.04
SEMA4B-205ENST00000558848 TRPM4Q8TD43 1214 aa15.27■□□□□ 0.04
SEMA4B-205ENST00000558848 METTL22Q9BUU2 404 aaPredicted RBP15.27■□□□□ 0.04
SEMA4B-205ENST00000558848 CHMP4AQ9BY43 222 aa15.27■□□□□ 0.04
SEMA4B-205ENST00000558848 CNOT7Q9UIV1 285 aaKnown RBP15.27■□□□□ 0.04
SEMA4B-205ENST00000558848 ABT1Q9ULW3 272 aaKnown RBP15.27■□□□□ 0.04
SEMA4B-205ENST00000558848 SHTN1A0MZ66 631 aa15.26■□□□□ 0.03
SEMA4B-205ENST00000558848 PSMD14O00487 310 aa15.26■□□□□ 0.03
SEMA4B-205ENST00000558848 HSP90B1P14625 803 aaKnown RBP15.26■□□□□ 0.03
SEMA4B-205ENST00000558848 MAP2K1Q02750 393 aaPredicted RBP15.26■□□□□ 0.03
SEMA4B-205ENST00000558848 CCDC184Q52MB2 194 aa15.26■□□□□ 0.03
SEMA4B-205ENST00000558848 CCDC30Q5VVM6 783 aa15.26■□□□□ 0.03
SEMA4B-205ENST00000558848 SAPCD2Q86UD0 394 aa15.26■□□□□ 0.03
SEMA4B-205ENST00000558848 TBC1D16Q8TBP0 767 aa15.26■□□□□ 0.03
SEMA4B-205ENST00000558848 HHIPL1Q96JK4 782 aa15.26■□□□□ 0.03
SEMA4B-205ENST00000558848 SEC31BQ9NQW1 1179 aa15.26■□□□□ 0.03
SEMA4B-205ENST00000558848 RTL9Q8NET4 1388 aa15.25■□□□□ 0.03
SEMA4B-205ENST00000558848 CAPNS2Q96L46 248 aa15.25■□□□□ 0.03
SEMA4B-205ENST00000558848 MYD88Q99836 296 aa15.25■□□□□ 0.03
SEMA4B-205ENST00000558848 BCL2L13Q9BXK5 485 aa15.25■□□□□ 0.03
SEMA4B-205ENST00000558848 GLIS2Q9BZE0 524 aaPredicted RBP15.25■□□□□ 0.03
SEMA4B-205ENST00000558848 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
SEMA4B-205ENST00000558848 PDE8AO60658 829 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 IGKV5-2P06315 115 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 HSPA8P11142 646 aaKnown RBP15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 RPS12P25398 132 aaKnown RBP15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 CDC37L1Q7L3B6 337 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 WWC1Q8IX03 1113 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 MICALL2Q8IY33 904 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 AIDAQ96BJ3 306 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 EYA3Q99504 573 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 DBNDD1Q9H9R9 158 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 KCNQ5Q9NR82 932 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 CWC25Q9NXE8 425 aaPredicted RBP15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 TRPM7Q96QT4 1865 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 ZNF609O15014 1411 aa15.24■□□□□ 0.03
SEMA4B-205ENST00000558848 C6orf229H3BNL8 230 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms