RNA–Protein interactions for RNA: ENST00000558499.2

AC087477.2-202, humanhuman

TSL 4 BASIC

Gene AC087477.2, Length 4,856 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087477.2-202ENST00000558499 ERCC3P19447 782 aa8.46□□□□□ -1.05
AC087477.2-202ENST00000558499 CWC22Q9HCG8 908 aaKnown RBP8.46□□□□□ -1.05
AC087477.2-202ENST00000558499 SPTLC3Q9NUV7 552 aa8.46□□□□□ -1.05
AC087477.2-202ENST00000558499 CDC27P30260 824 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 PDE6BP35913 854 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 WDR33Q9C0J8 1336 aaKnown RBP8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 MBD3O95983 291 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 CYP21A2P08686 494 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 SKILP12757 684 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 CABLES1Q8TDN4 633 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 ANKRD7Q92527 254 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 STAMQ92783 540 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 DIAPH3Q9NSV4 1193 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 MAP3K2Q9Y2U5 619 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 ADGRB3O60242 1522 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 N4BP1O75113 896 aaKnown RBP8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 EVX2Q03828 476 aa8.46□□□□□ -1.06
AC087477.2-202ENST00000558499 CT47B1P0C2W7 299 aaPredicted RBP8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 E4F1Q66K89 784 aaPredicted RBP8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 SPATA32Q96LK8 384 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 DBNDD2Q9BQY9 259 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 STK31Q9BXU1 1019 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 AXIN2Q9Y2T1 843 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 NRXN1Q9ULB1 1477 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 SLC27A2O14975 620 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 SCRN1Q12765 414 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 NECTIN1Q15223 517 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 TRMT44Q8IYL2 757 aaKnown RBP8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 NGDNQ8NEJ9 315 aaKnown RBP8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 CLIC6Q96NY7 704 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 SEC31BQ9NQW1 1179 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 HSP90B1P14625 803 aaKnown RBP8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 ZC3H13Q5T200 1668 aaKnown RBP8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 TTC21AQ8NDW8 1320 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 CCDC69A6NI79 296 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 IBSPP21815 317 aaPredicted RBP8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 ZNF75DP51815 510 aa8.45□□□□□ -1.06
AC087477.2-202ENST00000558499 NEXMIFQ5QGS0 1516 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 DLC1Q96QB1 1528 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 ATP7BP35670 1465 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 SLC4A8Q2Y0W8 1093 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 CASC1Q6TDU7 716 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 USP49Q70CQ1 688 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 ISY1Q9ULR0 285 aaKnown RBP8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 TET3O43151 1660 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 NKRFO15226 690 aaKnown RBP eCLIP8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 SF3A3Q12874 501 aaKnown RBP eCLIP8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 ARMCX5Q6P1M9 558 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 KIF18AQ8NI77 898 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 OSBPL3Q9H4L5 887 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 MYOM2P54296 1465 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 IQCB1Q15051 598 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 Q6ZUG5 572 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 CCAR2Q8N163 923 aaKnown RBP8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 FSD1Q9BTV5 496 aa8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 DBNLQ9UJU6 430 aaKnown RBP8.44□□□□□ -1.06
AC087477.2-202ENST00000558499 ADD1P35611 737 aaKnown RBP8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 HNRNPH2P55795 449 aaKnown RBP8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 ZC3H6P61129 1189 aaKnown RBP8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 CCZ1BP86790 482 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 CCZ1P86791 482 aaPredicted RBP8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 CLIC4Q9Y696 253 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 IGKV5-2P06315 115 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 MAP3K11Q16584 847 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 BEND3Q5T5X7 828 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 SMIM5Q71RC9 77 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 SSH3Q8TE77 659 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 AMOTL2Q9Y2J4 779 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 NDUFA8P51970 172 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 WDR24Q96S15 920 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 XPO4Q9C0E2 1151 aaKnown RBP8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 EHD4Q9H223 541 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 C5orf42Q9H799 3197 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 CDC25AP30304 524 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 SCARF1Q14162 830 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 FAM200AQ8TCP9 573 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 TRIM34Q9BYJ4 488 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 PUS3Q9BZE2 481 aaKnown RBP8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 C9orf78Q9NZ63 289 aaPredicted RBP8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 IFNKQ9P0W0 207 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 TTC41PQ6P2S7 1318 aa8.43□□□□□ -1.06
AC087477.2-202ENST00000558499 EYSQ5T1H1 3165 aa8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 ZMYND10O75800 440 aa8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 HMGN5P82970 282 aaKnown RBP8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 FOXP4Q8IVH2 680 aaPredicted RBP8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 LRRC8AQ8IWT6 810 aa8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 KARSQ15046 597 aaKnown RBP8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 NOM1Q5C9Z4 860 aaKnown RBP8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 PROSER2Q86WR7 435 aaPredicted RBP8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 SMYD4Q8IYR2 804 aaPredicted RBP8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 PDILTQ8N807 584 aa8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 RIN2Q8WYP3 895 aaPredicted RBP8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 PPLO60437 1756 aa8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 KIF28PB7ZC32 967 aa8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 UBE3BQ7Z3V4 1068 aa8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 PHKBQ93100 1093 aa8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 NEDD4P46934 1319 aa8.42□□□□□ -1.06
AC087477.2-202ENST00000558499 CCDC171Q6TFL3 1326 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms