RNA–Protein interactions for RNA: ENST00000558466.5

SNX22-203, Transcript of sorting nexin 22, humanhuman

TSL 5

Gene SNX22, Length 1,353 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-203ENST00000558466 TMEM57Q8N5G2 664 aa24■■□□□ 1.43
SNX22-203ENST00000558466 C7orf43Q8WVR3 580 aa24■■□□□ 1.43
SNX22-203ENST00000558466 RPGRQ92834 1020 aaKnown RBP24■■□□□ 1.43
SNX22-203ENST00000558466 RBM17Q96I25 401 aaKnown RBP24■■□□□ 1.43
SNX22-203ENST00000558466 BCS1LQ9Y276 419 aa24■■□□□ 1.43
SNX22-203ENST00000558466 EPHA10Q5JZY3 1008 aa23.99■■□□□ 1.43
SNX22-203ENST00000558466 PLIN1O60240 522 aa23.98■■□□□ 1.43
SNX22-203ENST00000558466 PRPF40BQ6NWY9 871 aaKnown RBP23.98■■□□□ 1.43
SNX22-203ENST00000558466 SUCLG2Q96I99 432 aa23.98■■□□□ 1.43
SNX22-203ENST00000558466 SLX4Q8IY92 1834 aa23.98■■□□□ 1.43
SNX22-203ENST00000558466 GPR162Q16538 588 aa23.97■■□□□ 1.43
SNX22-203ENST00000558466 RTL9Q8NET4 1388 aa23.96■■□□□ 1.43
SNX22-203ENST00000558466 CCDC152Q4G0S7 254 aa23.96■■□□□ 1.43
SNX22-203ENST00000558466 DDX46Q7L014 1031 aaKnown RBP23.96■■□□□ 1.43
SNX22-203ENST00000558466 ZNF784Q8NCA9 323 aaPredicted RBP23.96■■□□□ 1.43
SNX22-203ENST00000558466 MS4A1P11836 297 aa23.95■■□□□ 1.42
SNX22-203ENST00000558466 GRAPQ13588 217 aa23.95■■□□□ 1.42
SNX22-203ENST00000558466 RABL6Q3YEC7 729 aaPredicted RBP23.95■■□□□ 1.42
SNX22-203ENST00000558466 FTSJ3Q8IY81 847 aaKnown RBP23.95■■□□□ 1.42
SNX22-203ENST00000558466 GRAPLQ8TC17 118 aaPredicted RBP23.95■■□□□ 1.42
SNX22-203ENST00000558466 PANK1Q8TE04 598 aa23.95■■□□□ 1.42
SNX22-203ENST00000558466 MEIS3Q99687 375 aa23.95■■□□□ 1.42
SNX22-203ENST00000558466 SEC31BQ9NQW1 1179 aa23.95■■□□□ 1.42
SNX22-203ENST00000558466 ARFGEF1Q9Y6D6 1849 aa23.95■■□□□ 1.42
SNX22-203ENST00000558466 BBOX1O75936 387 aa23.94■■□□□ 1.42
SNX22-203ENST00000558466 PDE3AQ14432 1141 aa23.94■■□□□ 1.42
SNX22-203ENST00000558466 IFFO2Q5TF58 517 aa23.94■■□□□ 1.42
SNX22-203ENST00000558466 CELF1Q92879 486 aaKnown RBP23.94■■□□□ 1.42
SNX22-203ENST00000558466 GREM2Q9H772 168 aa23.94■■□□□ 1.42
SNX22-203ENST00000558466 MYH3P11055 1940 aa23.94■■□□□ 1.42
SNX22-203ENST00000558466 COL4A1P02462 1669 aa23.93■■□□□ 1.42
SNX22-203ENST00000558466 GRIN3BO60391 1043 aa23.93■■□□□ 1.42
SNX22-203ENST00000558466 PELP1Q8IZL8 1130 aaKnown RBP23.93■■□□□ 1.42
SNX22-203ENST00000558466 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.93■■□□□ 1.42
SNX22-203ENST00000558466 LMBR1LQ6UX01 489 aa23.92■■□□□ 1.42
SNX22-203ENST00000558466 ANKRD44Q8N8A2 993 aa23.92■■□□□ 1.42
SNX22-203ENST00000558466 CCDC85AQ96PX6 553 aaPredicted RBP23.92■■□□□ 1.42
SNX22-203ENST00000558466 ZBTB7BO15156 539 aaPredicted RBP23.91■■□□□ 1.42
SNX22-203ENST00000558466 C21orf2O43822 256 aa23.91■■□□□ 1.42
SNX22-203ENST00000558466 RPS8P62241 208 aaKnown RBP23.91■■□□□ 1.42
SNX22-203ENST00000558466 C20orf194Q5TEA3 1177 aa23.91■■□□□ 1.42
SNX22-203ENST00000558466 BICC1Q9H694 974 aaKnown RBP23.91■■□□□ 1.42
SNX22-203ENST00000558466 SNED1Q8TER0 1413 aa23.91■■□□□ 1.42
SNX22-203ENST00000558466 TAF1P21675 1872 aa23.91■■□□□ 1.42
SNX22-203ENST00000558466 GNAI3P08754 354 aa23.91■■□□□ 1.42
SNX22-203ENST00000558466 UBTFL1P0CB47 393 aaPredicted RBP23.91■■□□□ 1.42
SNX22-203ENST00000558466 FAM161AQ3B820 660 aa23.91■■□□□ 1.42
SNX22-203ENST00000558466 PPEF1O14829 653 aaPredicted RBP23.9■■□□□ 1.42
SNX22-203ENST00000558466 RRP1P56182 461 aaKnown RBP23.9■■□□□ 1.42
SNX22-203ENST00000558466 SLC51AQ86UW1 340 aa23.9■■□□□ 1.42
SNX22-203ENST00000558466 ATP6V0A2Q9Y487 856 aa23.9■■□□□ 1.42
SNX22-203ENST00000558466 ITGA6P23229 1130 aa23.89■■□□□ 1.41
SNX22-203ENST00000558466 OLFM4Q6UX06 510 aa23.89■■□□□ 1.41
SNX22-203ENST00000558466 TMC4Q7Z404 712 aa23.89■■□□□ 1.41
SNX22-203ENST00000558466 ITPRIPQ8IWB1 547 aa23.89■■□□□ 1.41
SNX22-203ENST00000558466 SP8Q8IXZ3 490 aa23.89■■□□□ 1.41
SNX22-203ENST00000558466 HDAC5Q9UQL6 1122 aa23.89■■□□□ 1.41
SNX22-203ENST00000558466 MVPQ14764 893 aaKnown RBP23.88■■□□□ 1.41
SNX22-203ENST00000558466 SOGA3Q5TF21 947 aa23.88■■□□□ 1.41
SNX22-203ENST00000558466 CC2D2BQ6DHV5 1058 aa23.88■■□□□ 1.41
SNX22-203ENST00000558466 CACNA1SQ13698 1873 aa23.87■■□□□ 1.41
SNX22-203ENST00000558466 CDC5LQ99459 802 aaKnown RBP23.87■■□□□ 1.41
SNX22-203ENST00000558466 ZNF219Q9P2Y4 722 aaPredicted RBP23.87■■□□□ 1.41
SNX22-203ENST00000558466 LRRFIP2Q9Y608 721 aaKnown RBP23.87■■□□□ 1.41
SNX22-203ENST00000558466 NFKBIEO00221 500 aa23.86■■□□□ 1.41
SNX22-203ENST00000558466 COG6Q9Y2V7 657 aa23.86■■□□□ 1.41
SNX22-203ENST00000558466 IFIT5Q13325 482 aaKnown RBP23.85■■□□□ 1.41
SNX22-203ENST00000558466 CCDC93Q567U6 631 aa23.85■■□□□ 1.41
SNX22-203ENST00000558466 ARHGAP27Q6ZUM4 889 aa23.85■■□□□ 1.41
SNX22-203ENST00000558466 ANKRD18AQ8IVF6 992 aa23.85■■□□□ 1.41
SNX22-203ENST00000558466 BSDC1Q9NW68 430 aaPredicted RBP23.85■■□□□ 1.41
SNX22-203ENST00000558466 FER1L6Q2WGJ9 1857 aa23.84■■□□□ 1.41
SNX22-203ENST00000558466 ANKRD18BA2A2Z9 1011 aa23.84■■□□□ 1.41
SNX22-203ENST00000558466 GNAI2P04899 355 aa23.84■■□□□ 1.41
SNX22-203ENST00000558466 C1QTNF8P60827 252 aa23.84■■□□□ 1.41
SNX22-203ENST00000558466 MTX1Q13505 466 aa23.84■■□□□ 1.41
SNX22-203ENST00000558466 GRIPAP1Q4V328 841 aa23.84■■□□□ 1.41
SNX22-203ENST00000558466 DDX19BQ9UMR2 479 aa23.84■■□□□ 1.41
SNX22-203ENST00000558466 LTBP3Q9NS15 1303 aa23.83■■□□□ 1.41
SNX22-203ENST00000558466 RFX5P48382 616 aaPredicted RBP23.83■■□□□ 1.41
SNX22-203ENST00000558466 CCDC57Q2TAC2 916 aa23.83■■□□□ 1.41
SNX22-203ENST00000558466 RTKN2Q8IZC4 609 aa23.83■■□□□ 1.41
SNX22-203ENST00000558466 CHMP3Q9Y3E7 222 aa23.82■■□□□ 1.4
SNX22-203ENST00000558466 LRRC37AA6NMS7 1700 aa23.82■■□□□ 1.4
SNX22-203ENST00000558466 PRELPP51888 382 aa23.81■■□□□ 1.4
SNX22-203ENST00000558466 PSMD1Q99460 953 aa23.81■■□□□ 1.4
SNX22-203ENST00000558466 RTFDC1Q9BY42 306 aaPredicted RBP23.81■■□□□ 1.4
SNX22-203ENST00000558466 ZBTB40Q9NUA8 1239 aa23.81■■□□□ 1.4
SNX22-203ENST00000558466 IGHMBP2P38935 993 aaKnown RBP23.8■■□□□ 1.4
SNX22-203ENST00000558466 ZNF594Q96JF6 807 aaPredicted RBP23.8■■□□□ 1.4
SNX22-203ENST00000558466 MINPP1Q9UNW1 487 aa23.8■■□□□ 1.4
SNX22-203ENST00000558466 FKBP4Q02790 459 aaKnown RBP eCLIP23.79■■□□□ 1.4
SNX22-203ENST00000558466 RASSF7Q02833 373 aa23.79■■□□□ 1.4
SNX22-203ENST00000558466 PODXL2Q9NZ53 605 aa23.79■■□□□ 1.4
SNX22-203ENST00000558466 PTPN12Q05209 780 aaKnown RBP23.78■■□□□ 1.4
SNX22-203ENST00000558466 TAOK3Q9H2K8 898 aa23.78■■□□□ 1.4
SNX22-203ENST00000558466 SUPT16HQ9Y5B9 1047 aaKnown RBP23.78■■□□□ 1.4
SNX22-203ENST00000558466 MPNDQ8N594 471 aa23.78■■□□□ 1.4
SNX22-203ENST00000558466 MPHOSPH8Q99549 860 aa23.78■■□□□ 1.4
SNX22-203ENST00000558466 GPSM2P81274 684 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms