RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 PI4KAP2A4QPH2 592 aa15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 NEXNQ0ZGT2 675 aa15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 SF3B3Q15393 1217 aaKnown RBP15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 AOC3Q16853 763 aa15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 EAPPQ56P03 285 aaPredicted RBP15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 GPC2Q8N158 579 aa15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 PI4KAP1Q8N8J0 262 aa15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 JARID2Q92833 1246 aaPredicted RBP15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 L3MBTL3Q96JM7 780 aaPredicted RBP15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 VPS33BQ9H267 617 aa15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 TAF1DQ9H5J8 278 aaPredicted RBP15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 HACL1Q9UJ83 578 aa15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 WDR90Q96KV7 1748 aa15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
CDC42BPB-202ENST00000558321 SNED1Q8TER0 1413 aa15.86■□□□□ 0.13
CDC42BPB-202ENST00000558321 PCCAP05165 728 aaPredicted RBP15.86■□□□□ 0.13
CDC42BPB-202ENST00000558321 HTRA3P83110 453 aa15.86■□□□□ 0.13
CDC42BPB-202ENST00000558321 CHADLQ6NUI6 762 aa15.86■□□□□ 0.13
CDC42BPB-202ENST00000558321 CLEC11AQ9Y240 323 aa15.86■□□□□ 0.13
CDC42BPB-202ENST00000558321 EXOSC9Q06265 439 aaKnown RBP15.85■□□□□ 0.13
CDC42BPB-202ENST00000558321 G2E3Q7L622 706 aa15.85■□□□□ 0.13
CDC42BPB-202ENST00000558321 RTFDC1Q9BY42 306 aaPredicted RBP15.85■□□□□ 0.13
CDC42BPB-202ENST00000558321 MYH16Q9H6N6 1097 aa15.85■□□□□ 0.13
CDC42BPB-202ENST00000558321 PDE8AO60658 829 aa15.84■□□□□ 0.13
CDC42BPB-202ENST00000558321 LMOD1P29536 600 aaPredicted RBP15.84■□□□□ 0.13
CDC42BPB-202ENST00000558321 EPHX2P34913 555 aa15.84■□□□□ 0.13
CDC42BPB-202ENST00000558321 RPS8P62241 208 aaKnown RBP15.84■□□□□ 0.13
CDC42BPB-202ENST00000558321 LDHDQ86WU2 507 aa15.84■□□□□ 0.13
CDC42BPB-202ENST00000558321 DNAJC5GQ8N7S2 189 aa15.84■□□□□ 0.13
CDC42BPB-202ENST00000558321 CELF1Q92879 486 aaKnown RBP15.84■□□□□ 0.13
CDC42BPB-202ENST00000558321 NSFL1CQ9UNZ2 370 aaKnown RBP15.84■□□□□ 0.13
CDC42BPB-202ENST00000558321 VAMP4O75379 141 aa15.83■□□□□ 0.12
CDC42BPB-202ENST00000558321 POTEIP0CG38 1075 aa15.83■□□□□ 0.12
CDC42BPB-202ENST00000558321 POTEJP0CG39 1038 aa15.83■□□□□ 0.12
CDC42BPB-202ENST00000558321 FLIIQ13045 1269 aa15.83■□□□□ 0.12
CDC42BPB-202ENST00000558321 FKBP5Q13451 457 aaPredicted RBP15.83■□□□□ 0.12
CDC42BPB-202ENST00000558321 CCDC152Q4G0S7 254 aa15.83■□□□□ 0.12
CDC42BPB-202ENST00000558321 PNMA8AQ86V59 439 aaPredicted RBP15.83■□□□□ 0.12
CDC42BPB-202ENST00000558321 CCDC85AQ96PX6 553 aaPredicted RBP15.83■□□□□ 0.12
CDC42BPB-202ENST00000558321 ZNRF3Q9ULT6 936 aa15.83■□□□□ 0.12
CDC42BPB-202ENST00000558321 C6orf229H3BNL8 230 aa15.82■□□□□ 0.12
CDC42BPB-202ENST00000558321 IGKV5-2P06315 115 aa15.82■□□□□ 0.12
CDC42BPB-202ENST00000558321 KIAA2012Q0VF49 1180 aa15.81■□□□□ 0.12
CDC42BPB-202ENST00000558321 WASHC4Q2M389 1173 aa15.81■□□□□ 0.12
CDC42BPB-202ENST00000558321 CWF19L2Q2TBE0 894 aaKnown RBP15.81■□□□□ 0.12
CDC42BPB-202ENST00000558321 SPINK5Q9NQ38 1064 aaPredicted RBP15.81■□□□□ 0.12
CDC42BPB-202ENST00000558321 SEC31BQ9NQW1 1179 aa15.81■□□□□ 0.12
CDC42BPB-202ENST00000558321 LAMB2P55268 1798 aa15.8■□□□□ 0.12
CDC42BPB-202ENST00000558321 CEP350Q5VT06 3117 aa15.8■□□□□ 0.12
CDC42BPB-202ENST00000558321 NEURL1BA8MQ27 555 aa15.8■□□□□ 0.12
CDC42BPB-202ENST00000558321 RIMBP2O15034 1052 aa15.8■□□□□ 0.12
CDC42BPB-202ENST00000558321 GPSM2P81274 684 aa15.8■□□□□ 0.12
CDC42BPB-202ENST00000558321 CXCL9Q07325 125 aa15.8■□□□□ 0.12
CDC42BPB-202ENST00000558321 TNIP1Q15025 636 aa15.8■□□□□ 0.12
CDC42BPB-202ENST00000558321 COL4A5P29400 1685 aa15.79■□□□□ 0.12
CDC42BPB-202ENST00000558321 CDHR2Q9BYE9 1310 aa15.79■□□□□ 0.12
CDC42BPB-202ENST00000558321 RAD17O75943 681 aa15.79■□□□□ 0.12
CDC42BPB-202ENST00000558321 CIAPIN1Q6FI81 312 aa15.79■□□□□ 0.12
CDC42BPB-202ENST00000558321 ANKRD18AQ8IVF6 992 aa15.79■□□□□ 0.12
CDC42BPB-202ENST00000558321 DNAAF4Q8WXU2 420 aa15.79■□□□□ 0.12
CDC42BPB-202ENST00000558321 KLRG1Q96E93 195 aa15.79■□□□□ 0.12
CDC42BPB-202ENST00000558321 EYA3Q99504 573 aa15.79■□□□□ 0.12
CDC42BPB-202ENST00000558321 ANKIB1Q9P2G1 1089 aa15.79■□□□□ 0.12
CDC42BPB-202ENST00000558321 DDX60Q8IY21 1712 aaKnown RBP15.79■□□□□ 0.12
CDC42BPB-202ENST00000558321 G3V3G9 751 aa15.78■□□□□ 0.12
CDC42BPB-202ENST00000558321 EPS15P42566 896 aa15.78■□□□□ 0.12
CDC42BPB-202ENST00000558321 CTSWP56202 376 aa15.78■□□□□ 0.12
CDC42BPB-202ENST00000558321 DCAF8Q5TAQ9 597 aa15.78■□□□□ 0.12
CDC42BPB-202ENST00000558321 UBE3BQ7Z3V4 1068 aa15.78■□□□□ 0.12
CDC42BPB-202ENST00000558321 BCL2L13Q9BXK5 485 aa15.78■□□□□ 0.12
CDC42BPB-202ENST00000558321 H7C1W4 665 aa15.77■□□□□ 0.12
CDC42BPB-202ENST00000558321 SCNN1DP51172 638 aa15.77■□□□□ 0.12
CDC42BPB-202ENST00000558321 GCKRQ14397 625 aa15.77■□□□□ 0.12
CDC42BPB-202ENST00000558321 LINS1Q8NG48 757 aa15.77■□□□□ 0.12
CDC42BPB-202ENST00000558321 CDC5LQ99459 802 aaKnown RBP15.77■□□□□ 0.12
CDC42BPB-202ENST00000558321 ZC3H12CQ9C0D7 883 aaKnown RBP15.77■□□□□ 0.12
CDC42BPB-202ENST00000558321 POLLQ9UGP5 575 aa15.77■□□□□ 0.12
CDC42BPB-202ENST00000558321 TAF1P21675 1872 aa15.77■□□□□ 0.11
CDC42BPB-202ENST00000558321 SCN4AP35499 1836 aa15.77■□□□□ 0.11
CDC42BPB-202ENST00000558321 GMPSP49915 693 aaPredicted RBP15.76■□□□□ 0.11
CDC42BPB-202ENST00000558321 DOK7Q18PE1 504 aa15.76■□□□□ 0.11
CDC42BPB-202ENST00000558321 MAP1SQ66K74 1059 aaPredicted RBP15.76■□□□□ 0.11
CDC42BPB-202ENST00000558321 CNTROBQ8N137 903 aa15.76■□□□□ 0.11
CDC42BPB-202ENST00000558321 TTLL11Q8NHH1 800 aa15.76■□□□□ 0.11
CDC42BPB-202ENST00000558321 TBC1D16Q8TBP0 767 aa15.76■□□□□ 0.11
CDC42BPB-202ENST00000558321 DBNDD1Q9H9R9 158 aa15.76■□□□□ 0.11
CDC42BPB-202ENST00000558321 GGA1Q9UJY5 639 aa15.76■□□□□ 0.11
CDC42BPB-202ENST00000558321 UFL1O94874 794 aa15.75■□□□□ 0.11
CDC42BPB-202ENST00000558321 USP50Q70EL3 339 aaPredicted RBP15.75■□□□□ 0.11
CDC42BPB-202ENST00000558321 GPR101Q96P66 508 aaPredicted RBP15.75■□□□□ 0.11
CDC42BPB-202ENST00000558321 CREBZFQ9NS37 354 aa15.75■□□□□ 0.11
CDC42BPB-202ENST00000558321 ADARB2Q9NS39 739 aaKnown RBP15.75■□□□□ 0.11
CDC42BPB-202ENST00000558321 GPRC5DQ9NZD1 345 aa15.75■□□□□ 0.11
CDC42BPB-202ENST00000558321 YDJCA8MPS7 323 aa15.74■□□□□ 0.11
CDC42BPB-202ENST00000558321 F6X3S4 739 aa15.74■□□□□ 0.11
CDC42BPB-202ENST00000558321 ITGBL1O95965 494 aaPredicted RBP15.74■□□□□ 0.11
CDC42BPB-202ENST00000558321 GREM2Q9H772 168 aa15.74■□□□□ 0.11
CDC42BPB-202ENST00000558321 PODXL2Q9NZ53 605 aa15.74■□□□□ 0.11
CDC42BPB-202ENST00000558321 ECE2O60344 883 aa15.73■□□□□ 0.11
CDC42BPB-202ENST00000558321 CNOT7Q9UIV1 285 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms