RNA–Protein interactions for RNA: ENST00000558196.1

SEC11A-204, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 3

Gene SEC11A, Length 540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-204ENST00000558196 ERVV-1B6SEH8 477 aa10.36□□□□□ -0.75
SEC11A-204ENST00000558196 RIMBP2O15034 1052 aa10.36□□□□□ -0.75
SEC11A-204ENST00000558196 HLFQ16534 295 aa10.36□□□□□ -0.75
SEC11A-204ENST00000558196 NIP7Q9Y221 180 aaKnown RBP eCLIP10.36□□□□□ -0.75
SEC11A-204ENST00000558196 SCN7AQ01118 1682 aa10.36□□□□□ -0.75
SEC11A-204ENST00000558196 TNRC6CQ9HCJ0 1690 aaKnown RBP10.35□□□□□ -0.75
SEC11A-204ENST00000558196 NPHP1O15259 732 aa10.35□□□□□ -0.75
SEC11A-204ENST00000558196 EIF4A1P60842 406 aaKnown RBP10.35□□□□□ -0.75
SEC11A-204ENST00000558196 PNISRQ8TF01 805 aaKnown RBP10.35□□□□□ -0.75
SEC11A-204ENST00000558196 WDR90Q96KV7 1748 aa10.34□□□□□ -0.75
SEC11A-204ENST00000558196 DDNO94850 711 aaPredicted RBP10.34□□□□□ -0.75
SEC11A-204ENST00000558196 HOXB1P14653 301 aaPredicted RBP10.34□□□□□ -0.75
SEC11A-204ENST00000558196 ALDH1B1P30837 517 aa10.34□□□□□ -0.75
SEC11A-204ENST00000558196 NFE2L2Q16236 605 aa10.34□□□□□ -0.75
SEC11A-204ENST00000558196 CCDC93Q567U6 631 aa10.34□□□□□ -0.75
SEC11A-204ENST00000558196 TBC1D12O60347 775 aa10.33□□□□□ -0.76
SEC11A-204ENST00000558196 EVI5O60447 810 aa10.33□□□□□ -0.76
SEC11A-204ENST00000558196 FKBP4Q02790 459 aaKnown RBP eCLIP10.33□□□□□ -0.76
SEC11A-204ENST00000558196 CRY2Q49AN0 593 aa10.33□□□□□ -0.76
SEC11A-204ENST00000558196 COL13A1Q5TAT6 717 aaPredicted RBP10.33□□□□□ -0.76
SEC11A-204ENST00000558196 RTKN2Q8IZC4 609 aa10.33□□□□□ -0.76
SEC11A-204ENST00000558196 MARVELD3Q96A59 401 aa10.33□□□□□ -0.76
SEC11A-204ENST00000558196 ZSWIM6Q9HCJ5 1215 aa10.33□□□□□ -0.76
SEC11A-204ENST00000558196 ARIH1Q9Y4X5 557 aaPredicted RBP10.33□□□□□ -0.76
SEC11A-204ENST00000558196 FER1L6Q2WGJ9 1857 aa10.33□□□□□ -0.76
SEC11A-204ENST00000558196 SLX4Q8IY92 1834 aa10.33□□□□□ -0.76
SEC11A-204ENST00000558196 NEFMP07197 916 aa10.32□□□□□ -0.76
SEC11A-204ENST00000558196 HOXA10P31260 410 aaPredicted RBP10.32□□□□□ -0.76
SEC11A-204ENST00000558196 NYXQ9GZU5 481 aa10.32□□□□□ -0.76
SEC11A-204ENST00000558196 PNNQ9H307 717 aaKnown RBP10.32□□□□□ -0.76
SEC11A-204ENST00000558196 COL11A2P13942 1736 aaPredicted RBP10.32□□□□□ -0.76
SEC11A-204ENST00000558196 MAP3K15Q6ZN16 1313 aa10.32□□□□□ -0.76
SEC11A-204ENST00000558196 IQCA1LA6NCM1 817 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 FZD9O00144 591 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 PDIA6Q15084 440 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 OLFM4Q6UX06 510 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 TTLL7Q6ZT98 887 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 LRP10Q7Z4F1 713 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 ZNF34Q8IZ26 560 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 SYNE4Q8N205 404 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 TAF1DQ9H5J8 278 aaPredicted RBP10.31□□□□□ -0.76
SEC11A-204ENST00000558196 ZNF277Q9NRM2 450 aaPredicted RBP10.31□□□□□ -0.76
SEC11A-204ENST00000558196 RRP7AQ9Y3A4 280 aaKnown RBP10.31□□□□□ -0.76
SEC11A-204ENST00000558196 BCORQ6W2J9 1755 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 SNED1Q8TER0 1413 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 PASKQ96RG2 1323 aa10.31□□□□□ -0.76
SEC11A-204ENST00000558196 FAM177BA6PVY3 158 aa10.3□□□□□ -0.76
SEC11A-204ENST00000558196 GTF2E1P29083 439 aaPredicted RBP10.3□□□□□ -0.76
SEC11A-204ENST00000558196 CC2D2BQ6DHV5 1058 aa10.3□□□□□ -0.76
SEC11A-204ENST00000558196 LDHDQ86WU2 507 aa10.3□□□□□ -0.76
SEC11A-204ENST00000558196 NGEFQ8N5V2 710 aa10.3□□□□□ -0.76
SEC11A-204ENST00000558196 PSMD1Q99460 953 aa10.3□□□□□ -0.76
SEC11A-204ENST00000558196 THUMPD2Q9BTF0 503 aaKnown RBP10.3□□□□□ -0.76
SEC11A-204ENST00000558196 BABAM1Q9NWV8 329 aa10.3□□□□□ -0.76
SEC11A-204ENST00000558196 DICER1Q9UPY3 1922 aaKnown RBP10.3□□□□□ -0.76
SEC11A-204ENST00000558196 ERBB4Q15303 1308 aa10.3□□□□□ -0.76
SEC11A-204ENST00000558196 CCDC88AQ3V6T2 1871 aa10.3□□□□□ -0.76
SEC11A-204ENST00000558196 SEMA3EO15041 775 aa10.29□□□□□ -0.76
SEC11A-204ENST00000558196 ITGBL1O95965 494 aaPredicted RBP10.29□□□□□ -0.76
SEC11A-204ENST00000558196 IARSP41252 1262 aaKnown RBP10.29□□□□□ -0.76
SEC11A-204ENST00000558196 SUSD4Q5VX71 490 aa10.29□□□□□ -0.76
SEC11A-204ENST00000558196 GIGYF2Q6Y7W6 1299 aaKnown RBP10.29□□□□□ -0.76
SEC11A-204ENST00000558196 NUTM1Q86Y26 1132 aa10.29□□□□□ -0.76
SEC11A-204ENST00000558196 UBN2Q6ZU65 1347 aa10.29□□□□□ -0.76
SEC11A-204ENST00000558196 IBTKQ9P2D0 1353 aaPredicted RBP10.28□□□□□ -0.76
SEC11A-204ENST00000558196 TIAM2Q8IVF5 1701 aa10.28□□□□□ -0.76
SEC11A-204ENST00000558196 RIC1Q4ADV7 1423 aa10.28□□□□□ -0.76
SEC11A-204ENST00000558196 NTSR2O95665 410 aa10.28□□□□□ -0.76
SEC11A-204ENST00000558196 MYL6BP14649 208 aa10.28□□□□□ -0.76
SEC11A-204ENST00000558196 GRIPAP1Q4V328 841 aa10.28□□□□□ -0.76
SEC11A-204ENST00000558196 SLC10A5Q5PT55 438 aa10.28□□□□□ -0.76
SEC11A-204ENST00000558196 KIF6Q6ZMV9 814 aa10.28□□□□□ -0.76
SEC11A-204ENST00000558196 CRAMP1Q96RY5 1269 aa10.28□□□□□ -0.76
SEC11A-204ENST00000558196 LHX6Q9UPM6 363 aa10.28□□□□□ -0.76
SEC11A-204ENST00000558196 ZNF541Q9H0D2 1346 aa10.28□□□□□ -0.76
SEC11A-204ENST00000558196 ABCC12Q96J65 1359 aa10.27□□□□□ -0.76
SEC11A-204ENST00000558196 HSPA1AP0DMV8 641 aaKnown RBP10.27□□□□□ -0.77
SEC11A-204ENST00000558196 HSPA1BP0DMV9 641 aaKnown RBP10.27□□□□□ -0.77
SEC11A-204ENST00000558196 GPTP24298 496 aa10.27□□□□□ -0.77
SEC11A-204ENST00000558196 RIPK4P57078 832 aa10.27□□□□□ -0.77
SEC11A-204ENST00000558196 RALBP1Q15311 655 aa10.27□□□□□ -0.77
SEC11A-204ENST00000558196 PNMA8AQ86V59 439 aaPredicted RBP10.27□□□□□ -0.77
SEC11A-204ENST00000558196 GPC2Q8N158 579 aa10.27□□□□□ -0.77
SEC11A-204ENST00000558196 ZBTB3Q9H5J0 574 aa10.27□□□□□ -0.77
SEC11A-204ENST00000558196 HACL1Q9UJ83 578 aa10.27□□□□□ -0.77
SEC11A-204ENST00000558196 ARFGEF2Q9Y6D5 1785 aa10.26□□□□□ -0.77
SEC11A-204ENST00000558196 SPDYE16A6NNV3 312 aaPredicted RBP10.26□□□□□ -0.77
SEC11A-204ENST00000558196 EPHX2P34913 555 aa10.26□□□□□ -0.77
SEC11A-204ENST00000558196 TMPOP42166 694 aaKnown RBP10.26□□□□□ -0.77
SEC11A-204ENST00000558196 MLLT3P42568 568 aaPredicted RBP10.26□□□□□ -0.77
SEC11A-204ENST00000558196 EMP3P54852 163 aa10.26□□□□□ -0.77
SEC11A-204ENST00000558196 PARP10Q53GL7 1025 aa10.26□□□□□ -0.77
SEC11A-204ENST00000558196 PPP1R42Q7Z4L9 355 aa10.26□□□□□ -0.77
SEC11A-204ENST00000558196 JDP2Q8WYK2 163 aa10.26□□□□□ -0.77
SEC11A-204ENST00000558196 DDX12PQ92771 950 aa10.26□□□□□ -0.77
SEC11A-204ENST00000558196 RPGRQ92834 1020 aaKnown RBP10.26□□□□□ -0.77
SEC11A-204ENST00000558196 RBM17Q96I25 401 aaKnown RBP10.26□□□□□ -0.77
SEC11A-204ENST00000558196 TSPYL4Q9UJ04 414 aa10.26□□□□□ -0.77
SEC11A-204ENST00000558196 MAPK8IP3Q9UPT6 1336 aa10.26□□□□□ -0.77
SEC11A-204ENST00000558196 TMEM88BA6NKF7 163 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms