RNA–Protein interactions for RNA: ENST00000557856.5

NTRK3-208, Transcript of neurotrophic receptor tyrosine kinase 3, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene NTRK3, Length 2,622 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NTRK3-208	ENST00000557856	NUP62CL	Q9H1M0	184 aa		11.68	□□□□□ -0.54
NTRK3-208	ENST00000557856	LIMCH1	Q9UPQ0	1083 aa		11.68	□□□□□ -0.54
NTRK3-208	ENST00000557856	PRAMEF22	A3QJZ6	481 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	AK2	P54819	239 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	SLC39A6	Q13433	755 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	ANO6	Q4KMQ2	910 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	EFCC1	Q9HA90	598 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	BTBD11	A6QL63	1104 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	NUTM2E	B1AL46	878 aa	Predicted RBP	11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	RNMT	O43148	476 aa	Known RBP	11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	EVA1C	P58658	441 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	LARP1	Q6PKG0	1096 aa	Known RBP	11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	CKAP2L	Q8IYA6	745 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	NOL10	Q9BSC4	688 aa	Known RBP	11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	LRRCC1	Q9C099	1032 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	CLIP2	Q9UDT6	1046 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	SALL3	Q9BXA9	1300 aa		11.67	□□□□□ -0.54
NTRK3-208	ENST00000557856	PXDNL	A1KZ92	1463 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	DTNB	O60941	627 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	MMP14	P50281	582 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	PTPN14	Q15678	1187 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	ELF2	Q15723	593 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	RUFY3	Q7L099	469 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	UNC5CL	Q8IV45	518 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	NFATC2IP	Q8NCF5	419 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	RSPH14	Q9UHP6	348 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	MTMR6	Q9Y217	621 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	BRD2	P25440	801 aa	Known RBP	11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	GJB2	P29033	226 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	PSEN1	P49768	467 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	KIF1BP	Q96EK5	621 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	ERO1A	Q96HE7	468 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	TTC14	Q96N46	770 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	IL25	Q9H293	177 aa		11.66	□□□□□ -0.54
NTRK3-208	ENST00000557856	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	GNAI2	P04899	355 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	GNAI3	P08754	354 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	LIG1	P18858	919 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	CCDC144B	Q3MJ40	725 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	CCDC144CP	Q8IYA2	1237 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	DDX54	Q8TDD1	881 aa	Known RBP	11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	TNMD	Q9H2S6	317 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	ZNF446	Q9NWS9	450 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	SNX14	Q9Y5W7	946 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	CCDC171	Q6TFL3	1326 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	ABCC6	O95255	1503 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	USP27X	A6NNY8	438 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	NPHP1	O15259	732 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	NOP2	P46087	812 aa	Known RBP	11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	BMS1	Q14692	1282 aa	Known RBP	11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	BTG4	Q9NY30	223 aa		11.65	□□□□□ -0.54
NTRK3-208	ENST00000557856	VPS37C	A5D8V6	355 aa	Predicted RBP	11.64	□□□□□ -0.55
NTRK3-208	ENST00000557856	EPB41L2	O43491	1005 aa	Known RBP	11.64	□□□□□ -0.55
NTRK3-208	ENST00000557856	COL18A1	P39060	1754 aa		11.64	□□□□□ -0.55
NTRK3-208	ENST00000557856	SLFNL1	Q499Z3	407 aa		11.64	□□□□□ -0.55
NTRK3-208	ENST00000557856	CCDC83	Q8IWF9	413 aa		11.64	□□□□□ -0.55
NTRK3-208	ENST00000557856	LRRC8A	Q8IWT6	810 aa		11.64	□□□□□ -0.55
NTRK3-208	ENST00000557856	RAD50	Q92878	1312 aa		11.64	□□□□□ -0.55
NTRK3-208	ENST00000557856	TMX1	Q9H3N1	280 aa		11.64	□□□□□ -0.55
NTRK3-208	ENST00000557856	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.64	□□□□□ -0.55
NTRK3-208	ENST00000557856	TAT	P17735	454 aa	Predicted RBP	11.64	□□□□□ -0.55
NTRK3-208	ENST00000557856	CYP27B1	O15528	508 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	SLU7	O95391	586 aa	Known RBP	11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	TNNT3	P45378	269 aa	Predicted RBP	11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	PIP4K2A	P48426	406 aa	Predicted RBP	11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	NYAP1	Q6ZVC0	841 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	TTC6	Q86TZ1	520 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	TDRD7	Q8NHU6	1098 aa	Known RBP	11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	PHAX	Q9H814	394 aa	Known RBP	11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	STAP2	Q9UGK3	403 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	ADAMTS7	Q9UKP4	1686 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	CPD	O75976	1380 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	LARGE1	O95461	756 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	ZNF165	P49910	485 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	KRT85	P78386	507 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	RASEF	Q8IZ41	740 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	DACT1	Q9NYF0	836 aa		11.63	□□□□□ -0.55
NTRK3-208	ENST00000557856	CRYBG1	Q9Y4K1	1723 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	PLEKHG2	Q9H7P9	1386 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	GOLGA6L4	A6NEF3	574 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	DHX16	O60231	1041 aa	Known RBP	11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	CPA1	P15085	419 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	ARID5B	Q14865	1188 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	NEK11	Q8NG66	645 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	GTF3C6	Q969F1	213 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	RASSF4	Q9H2L5	321 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	TRMT1	Q9NXH9	659 aa	Known RBP	11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	CHPF2	Q9P2E5	772 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	MEGF6	O75095	1541 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	HEG1	Q9ULI3	1381 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	LOC102724159	A0A0B4J2E5	919 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	SKIL	P12757	684 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	PWP2	Q15269	919 aa	Known RBP	11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	RNF20	Q5VTR2	975 aa		11.62	□□□□□ -0.55
NTRK3-208	ENST00000557856	HDAC5	Q9UQL6	1122 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms