RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 HNRNPUQ00839 825 aaKnown RBP eCLIP15.94■□□□□ 0.14
SLIRP-211ENST00000557623 ZBTB38Q8NAP3 1195 aaPredicted RBP15.94■□□□□ 0.14
SLIRP-211ENST00000557623 CRAMP1Q96RY5 1269 aa15.94■□□□□ 0.14
SLIRP-211ENST00000557623 CT47B1P0C2W7 299 aaPredicted RBP15.93■□□□□ 0.14
SLIRP-211ENST00000557623 HCLS1P14317 486 aaPredicted RBP15.93■□□□□ 0.14
SLIRP-211ENST00000557623 DNAAF4Q8WXU2 420 aa15.93■□□□□ 0.14
SLIRP-211ENST00000557623 FAM89AQ96GI7 184 aa15.93■□□□□ 0.14
SLIRP-211ENST00000557623 PCCAP05165 728 aaPredicted RBP15.92■□□□□ 0.14
SLIRP-211ENST00000557623 SYNE4Q8N205 404 aa15.92■□□□□ 0.14
SLIRP-211ENST00000557623 IRS4O14654 1257 aaPredicted RBP15.91■□□□□ 0.14
SLIRP-211ENST00000557623 CCDC93Q567U6 631 aa15.91■□□□□ 0.14
SLIRP-211ENST00000557623 C3orf67Q6ZVT6 689 aa15.91■□□□□ 0.14
SLIRP-211ENST00000557623 NEURL1BA8MQ27 555 aa15.9■□□□□ 0.14
SLIRP-211ENST00000557623 IGKV5-2P06315 115 aa15.9■□□□□ 0.14
SLIRP-211ENST00000557623 ALDH1L2Q3SY69 923 aa15.9■□□□□ 0.14
SLIRP-211ENST00000557623 GRIPAP1Q4V328 841 aa15.9■□□□□ 0.14
SLIRP-211ENST00000557623 C9orf131Q5VYM1 1079 aa15.9■□□□□ 0.14
SLIRP-211ENST00000557623 CC2D2BQ6DHV5 1058 aa15.9■□□□□ 0.14
SLIRP-211ENST00000557623 DDX46Q7L014 1031 aaKnown RBP15.9■□□□□ 0.14
SLIRP-211ENST00000557623 RTKN2Q8IZC4 609 aa15.9■□□□□ 0.14
SLIRP-211ENST00000557623 ZNF784Q8NCA9 323 aaPredicted RBP15.9■□□□□ 0.14
SLIRP-211ENST00000557623 C7orf43Q8WVR3 580 aa15.9■□□□□ 0.14
SLIRP-211ENST00000557623 TAF1P21675 1872 aa15.9■□□□□ 0.14
SLIRP-211ENST00000557623 LTBP3Q9NS15 1303 aa15.9■□□□□ 0.14
SLIRP-211ENST00000557623 TIAM2Q8IVF5 1701 aa15.89■□□□□ 0.13
SLIRP-211ENST00000557623 C19orf67A6NJJ6 358 aa15.89■□□□□ 0.13
SLIRP-211ENST00000557623 NFKBIEO00221 500 aa15.89■□□□□ 0.13
SLIRP-211ENST00000557623 LMNB1P20700 586 aa15.89■□□□□ 0.13
SLIRP-211ENST00000557623 RASSF7Q02833 373 aa15.89■□□□□ 0.13
SLIRP-211ENST00000557623 SF3B3Q15393 1217 aaKnown RBP15.89■□□□□ 0.13
SLIRP-211ENST00000557623 RTL5Q5HYW3 569 aaPredicted RBP15.89■□□□□ 0.13
SLIRP-211ENST00000557623 MRPL50Q8N5N7 158 aaKnown RBP15.89■□□□□ 0.13
SLIRP-211ENST00000557623 LINS1Q8NG48 757 aa15.89■□□□□ 0.13
SLIRP-211ENST00000557623 TMX4Q9H1E5 349 aaPredicted RBP15.89■□□□□ 0.13
SLIRP-211ENST00000557623 TAOK3Q9H2K8 898 aa15.89■□□□□ 0.13
SLIRP-211ENST00000557623 RNF181Q9P0P0 153 aa15.89■□□□□ 0.13
SLIRP-211ENST00000557623 PTPRCP08575 1304 aa15.89■□□□□ 0.13
SLIRP-211ENST00000557623 CDHR2Q9BYE9 1310 aa15.89■□□□□ 0.13
SLIRP-211ENST00000557623 PPEF1O14829 653 aaPredicted RBP15.88■□□□□ 0.13
SLIRP-211ENST00000557623 PDE8AO60658 829 aa15.88■□□□□ 0.13
SLIRP-211ENST00000557623 BBOX1O75936 387 aa15.88■□□□□ 0.13
SLIRP-211ENST00000557623 CWF19L2Q2TBE0 894 aaKnown RBP15.88■□□□□ 0.13
SLIRP-211ENST00000557623 ABCC4O15439 1325 aa15.88■□□□□ 0.13
SLIRP-211ENST00000557623 CD44P16070 742 aaKnown RBP15.87■□□□□ 0.13
SLIRP-211ENST00000557623 GCKRQ14397 625 aa15.87■□□□□ 0.13
SLIRP-211ENST00000557623 TMC4Q7Z404 712 aa15.87■□□□□ 0.13
SLIRP-211ENST00000557623 SSH1Q8WYL5 1049 aa15.87■□□□□ 0.13
SLIRP-211ENST00000557623 ZBED9Q6R2W3 1325 aa15.87■□□□□ 0.13
SLIRP-211ENST00000557623 ZC3H4Q9UPT8 1303 aaKnown RBP15.87■□□□□ 0.13
SLIRP-211ENST00000557623 F6X3S4 739 aa15.86■□□□□ 0.13
SLIRP-211ENST00000557623 FKBP4Q02790 459 aaKnown RBP eCLIP15.86■□□□□ 0.13
SLIRP-211ENST00000557623 GRAPQ13588 217 aa15.86■□□□□ 0.13
SLIRP-211ENST00000557623 GRAPLQ8TC17 118 aaPredicted RBP15.86■□□□□ 0.13
SLIRP-211ENST00000557623 SMC4Q9NTJ3 1288 aa15.86■□□□□ 0.13
SLIRP-211ENST00000557623 H7C1W4 665 aa15.85■□□□□ 0.13
SLIRP-211ENST00000557623 CCDC152Q4G0S7 254 aa15.85■□□□□ 0.13
SLIRP-211ENST00000557623 BEND3Q5T5X7 828 aa15.85■□□□□ 0.13
SLIRP-211ENST00000557623 JARID2Q92833 1246 aaPredicted RBP15.85■□□□□ 0.13
SLIRP-211ENST00000557623 ATP6V0A2Q9Y487 856 aa15.85■□□□□ 0.13
SLIRP-211ENST00000557623 LRRC37AA6NMS7 1700 aa15.85■□□□□ 0.13
SLIRP-211ENST00000557623 ALDH1L1O75891 902 aa15.84■□□□□ 0.13
SLIRP-211ENST00000557623 SLC4A10Q6U841 1118 aa15.84■□□□□ 0.13
SLIRP-211ENST00000557623 UBE3BQ7Z3V4 1068 aa15.84■□□□□ 0.13
SLIRP-211ENST00000557623 SP8Q8IXZ3 490 aa15.84■□□□□ 0.13
SLIRP-211ENST00000557623 PSMD1Q99460 953 aa15.84■□□□□ 0.13
SLIRP-211ENST00000557623 PRELPP51888 382 aa15.83■□□□□ 0.12
SLIRP-211ENST00000557623 BRPF1P55201 1214 aaPredicted RBP15.83■□□□□ 0.12
SLIRP-211ENST00000557623 OLFM4Q6UX06 510 aa15.83■□□□□ 0.12
SLIRP-211ENST00000557623 BCL2L13Q9BXK5 485 aa15.83■□□□□ 0.12
SLIRP-211ENST00000557623 SRCIN1Q9C0H9 1055 aa15.83■□□□□ 0.12
SLIRP-211ENST00000557623 GPBP1L1Q9HC44 474 aaPredicted RBP15.83■□□□□ 0.12
SLIRP-211ENST00000557623 SNED1Q8TER0 1413 aa15.83■□□□□ 0.12
SLIRP-211ENST00000557623 CTSWP56202 376 aa15.82■□□□□ 0.12
SLIRP-211ENST00000557623 PLA2G12BQ9BX93 195 aa15.82■□□□□ 0.12
SLIRP-211ENST00000557623 SPEF2Q9C093 1822 aa15.82■□□□□ 0.12
SLIRP-211ENST00000557623 RARSP54136 660 aaKnown RBP15.81■□□□□ 0.12
SLIRP-211ENST00000557623 CASP7P55210 303 aa15.81■□□□□ 0.12
SLIRP-211ENST00000557623 RPS8P62241 208 aaKnown RBP15.81■□□□□ 0.12
SLIRP-211ENST00000557623 IFNLR1Q8IU57 520 aaPredicted RBP15.81■□□□□ 0.12
SLIRP-211ENST00000557623 SUPT20HQ8NEM7 779 aa15.81■□□□□ 0.12
SLIRP-211ENST00000557623 KDM2BQ8NHM5 1336 aa15.81■□□□□ 0.12
SLIRP-211ENST00000557623 ZNF526Q8TF50 670 aaPredicted RBP15.81■□□□□ 0.12
SLIRP-211ENST00000557623 CELF1Q92879 486 aaKnown RBP15.81■□□□□ 0.12
SLIRP-211ENST00000557623 C9orf78Q9NZ63 289 aaPredicted RBP15.81■□□□□ 0.12
SLIRP-211ENST00000557623 RTL9Q8NET4 1388 aa15.8■□□□□ 0.12
SLIRP-211ENST00000557623 KIF16BQ96L93 1317 aa15.8■□□□□ 0.12
SLIRP-211ENST00000557623 GRM8O00222 908 aa15.8■□□□□ 0.12
SLIRP-211ENST00000557623 IARSP41252 1262 aaKnown RBP15.8■□□□□ 0.12
SLIRP-211ENST00000557623 MPNDQ8N594 471 aa15.8■□□□□ 0.12
SLIRP-211ENST00000557623 TTLL11Q8NHH1 800 aa15.8■□□□□ 0.12
SLIRP-211ENST00000557623 CDC5LQ99459 802 aaKnown RBP15.8■□□□□ 0.12
SLIRP-211ENST00000557623 VPS33BQ9H267 617 aa15.8■□□□□ 0.12
SLIRP-211ENST00000557623 ZNF277Q9NRM2 450 aaPredicted RBP15.8■□□□□ 0.12
SLIRP-211ENST00000557623 DPY19L2Q6NUT2 758 aa15.79■□□□□ 0.12
SLIRP-211ENST00000557623 DPP8Q6V1X1 898 aaPredicted RBP15.79■□□□□ 0.12
SLIRP-211ENST00000557623 ANKRD18AQ8IVF6 992 aa15.79■□□□□ 0.12
SLIRP-211ENST00000557623 CCDC85AQ96PX6 553 aaPredicted RBP15.79■□□□□ 0.12
SLIRP-211ENST00000557623 API5Q9BZZ5 524 aaKnown RBP15.79■□□□□ 0.12
SLIRP-211ENST00000557623 SEC31BQ9NQW1 1179 aa15.79■□□□□ 0.12
SLIRP-211ENST00000557623 RTFDC1Q9BY42 306 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 172.9 ms