RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 SIL1Q9H173 461 aa17.87■□□□□ 0.45
ARHGEF40-208ENST00000557498 LRP5O75197 1615 aa17.87■□□□□ 0.45
ARHGEF40-208ENST00000557498 NFIXQ14938 502 aa17.86■□□□□ 0.45
ARHGEF40-208ENST00000557498 ERFEQ4G0M1 354 aa17.86■□□□□ 0.45
ARHGEF40-208ENST00000557498 OTUD7AQ8TE49 926 aaPredicted RBP17.86■□□□□ 0.45
ARHGEF40-208ENST00000557498 IL1RAPL2Q9NP60 686 aa17.86■□□□□ 0.45
ARHGEF40-208ENST00000557498 ABCC12Q96J65 1359 aa17.86■□□□□ 0.45
ARHGEF40-208ENST00000557498 SASH1O94885 1247 aa17.85■□□□□ 0.45
ARHGEF40-208ENST00000557498 IFIT5Q13325 482 aaKnown RBP17.85■□□□□ 0.45
ARHGEF40-208ENST00000557498 PNPLA7Q6ZV29 1317 aa17.85■□□□□ 0.45
ARHGEF40-208ENST00000557498 NBPF5PQ86XG9 351 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF40-208ENST00000557498 RTL9Q8NET4 1388 aa17.85■□□□□ 0.45
ARHGEF40-208ENST00000557498 CCDC85AQ96PX6 553 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF40-208ENST00000557498 SALL3Q9BXA9 1300 aa17.85■□□□□ 0.45
ARHGEF40-208ENST00000557498 BCL11AQ9H165 835 aa17.85■□□□□ 0.45
ARHGEF40-208ENST00000557498 GREM2Q9H772 168 aa17.85■□□□□ 0.45
ARHGEF40-208ENST00000557498 ANKRD18BA2A2Z9 1011 aa17.84■□□□□ 0.45
ARHGEF40-208ENST00000557498 CIAO1O76071 339 aa17.84■□□□□ 0.45
ARHGEF40-208ENST00000557498 SLC10A5Q5PT55 438 aa17.84■□□□□ 0.45
ARHGEF40-208ENST00000557498 COL23A1Q86Y22 540 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF40-208ENST00000557498 CLASRPQ8N2M8 674 aaKnown RBP17.84■□□□□ 0.45
ARHGEF40-208ENST00000557498 ZNF594Q96JF6 807 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF40-208ENST00000557498 ANO8Q9HCE9 1232 aaPredicted RBP17.84■□□□□ 0.45
ARHGEF40-208ENST00000557498 STK32BQ9NY57 414 aa17.84■□□□□ 0.45
ARHGEF40-208ENST00000557498 EYA2O00167 538 aa17.83■□□□□ 0.44
ARHGEF40-208ENST00000557498 ITGA6P23229 1130 aa17.83■□□□□ 0.44
ARHGEF40-208ENST00000557498 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.44
ARHGEF40-208ENST00000557498 TAF7LQ5H9L4 462 aa17.83■□□□□ 0.44
ARHGEF40-208ENST00000557498 TPTE2Q6XPS3 522 aa17.83■□□□□ 0.44
ARHGEF40-208ENST00000557498 DEFB132Q7Z7B7 95 aa17.83■□□□□ 0.44
ARHGEF40-208ENST00000557498 CCDC125Q86Z20 511 aa17.83■□□□□ 0.44
ARHGEF40-208ENST00000557498 FBXO3Q9UK99 471 aa17.83■□□□□ 0.44
ARHGEF40-208ENST00000557498 TNRC6CQ9HCJ0 1690 aaKnown RBP17.83■□□□□ 0.44
ARHGEF40-208ENST00000557498 RIC1Q4ADV7 1423 aa17.82■□□□□ 0.44
ARHGEF40-208ENST00000557498 IL15P40933 162 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF40-208ENST00000557498 SLC15A2Q16348 729 aa17.82■□□□□ 0.44
ARHGEF40-208ENST00000557498 CCDC152Q4G0S7 254 aa17.82■□□□□ 0.44
ARHGEF40-208ENST00000557498 ATG9AQ7Z3C6 839 aa17.82■□□□□ 0.44
ARHGEF40-208ENST00000557498 OSBPL3Q9H4L5 887 aa17.82■□□□□ 0.44
ARHGEF40-208ENST00000557498 AOX1Q06278 1338 aa17.81■□□□□ 0.44
ARHGEF40-208ENST00000557498 MSH5O43196 834 aa17.81■□□□□ 0.44
ARHGEF40-208ENST00000557498 MX1P20591 662 aa17.81■□□□□ 0.44
ARHGEF40-208ENST00000557498 TM4SF1P30408 202 aa17.81■□□□□ 0.44
ARHGEF40-208ENST00000557498 PDE1AP54750 535 aa17.81■□□□□ 0.44
ARHGEF40-208ENST00000557498 SF3B3Q15393 1217 aaKnown RBP17.81■□□□□ 0.44
ARHGEF40-208ENST00000557498 STAP2Q9UGK3 403 aa17.81■□□□□ 0.44
ARHGEF40-208ENST00000557498 TFCP2Q12800 502 aa17.8■□□□□ 0.44
ARHGEF40-208ENST00000557498 LRRC24Q50LG9 513 aa17.8■□□□□ 0.44
ARHGEF40-208ENST00000557498 BMP2KLQ5H9B9 411 aa17.8■□□□□ 0.44
ARHGEF40-208ENST00000557498 TTC22Q5TAA0 569 aa17.8■□□□□ 0.44
ARHGEF40-208ENST00000557498 CNBD1Q8NA66 436 aa17.8■□□□□ 0.44
ARHGEF40-208ENST00000557498 TSHZ2Q9NRE2 1034 aa17.8■□□□□ 0.44
ARHGEF40-208ENST00000557498 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.8■□□□□ 0.44
ARHGEF40-208ENST00000557498 SPEF2Q9C093 1822 aa17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 NRXN2Q9P2S2 1712 aa17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 IFIT2P09913 472 aaKnown RBP17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 GSPT1P15170 499 aaKnown RBP17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 DDR1Q08345 913 aa17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 C8orf34Q49A92 452 aa17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 C3orf67Q6ZVT6 689 aa17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 AACSQ86V21 672 aa17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 NLGN1Q8N2Q7 840 aa17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 PUS3Q9BZE2 481 aaKnown RBP17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 EP400Q96L91 3159 aa17.79■□□□□ 0.44
ARHGEF40-208ENST00000557498 POLRMTO00411 1230 aaKnown RBP17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 NPHP1O15259 732 aa17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 SERPINB2P05120 415 aa17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 TNNI3KQ59H18 835 aa17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 PRR5LQ6MZQ0 368 aa17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 EAF2Q96CJ1 260 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 NLRP3Q96P20 1036 aa17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 BACH2Q9BYV9 841 aa17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 GPR108Q9NPR9 543 aa17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 FPGT-TNNI3KV9GXZ4 949 aa17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 ZNF609O15014 1411 aa17.78■□□□□ 0.44
ARHGEF40-208ENST00000557498 TTC41PQ6P2S7 1318 aa17.77■□□□□ 0.44
ARHGEF40-208ENST00000557498 SEC31BQ9NQW1 1179 aa17.77■□□□□ 0.44
ARHGEF40-208ENST00000557498 ST5P78524 1137 aa17.76■□□□□ 0.43
ARHGEF40-208ENST00000557498 TSHZ3Q63HK5 1081 aa17.76■□□□□ 0.43
ARHGEF40-208ENST00000557498 LDHAL6AQ6ZMR3 332 aa17.76■□□□□ 0.43
ARHGEF40-208ENST00000557498 CCDC24Q8N4L8 307 aa17.76■□□□□ 0.43
ARHGEF40-208ENST00000557498 GPATCH3Q96I76 525 aa17.76■□□□□ 0.43
ARHGEF40-208ENST00000557498 CDC5LQ99459 802 aaKnown RBP17.76■□□□□ 0.43
ARHGEF40-208ENST00000557498 CNNM1Q9NRU3 951 aa17.76■□□□□ 0.43
ARHGEF40-208ENST00000557498 RIPOR2Q9Y4F9 1068 aa17.76■□□□□ 0.43
ARHGEF40-208ENST00000557498 COL4A1P02462 1669 aa17.76■□□□□ 0.43
ARHGEF40-208ENST00000557498 IGHMBP2P38935 993 aaKnown RBP17.75■□□□□ 0.43
ARHGEF40-208ENST00000557498 CCDC8Q9H0W5 538 aaPredicted RBP17.75■□□□□ 0.43
ARHGEF40-208ENST00000557498 CEP126Q9P2H0 1117 aa17.75■□□□□ 0.43
ARHGEF40-208ENST00000557498 A0A1B0GUL6 1792 aa17.74■□□□□ 0.43
ARHGEF40-208ENST00000557498 METTL24Q5JXM2 366 aa17.74■□□□□ 0.43
ARHGEF40-208ENST00000557498 PI4K2BQ8TCG2 481 aa17.74■□□□□ 0.43
ARHGEF40-208ENST00000557498 ECHDC1Q9NTX5 307 aa17.74■□□□□ 0.43
ARHGEF40-208ENST00000557498 TLR7Q9NYK1 1049 aaKnown RBP17.74■□□□□ 0.43
ARHGEF40-208ENST00000557498 MPHOSPH8Q99549 860 aa17.73■□□□□ 0.43
ARHGEF40-208ENST00000557498 DBNLQ9UJU6 430 aaKnown RBP17.73■□□□□ 0.43
ARHGEF40-208ENST00000557498 ANKRD31Q8N7Z5 1873 aa17.73■□□□□ 0.43
ARHGEF40-208ENST00000557498 MROH5Q6ZUA9 1318 aa17.72■□□□□ 0.43
ARHGEF40-208ENST00000557498 ARAP2Q8WZ64 1704 aa17.72■□□□□ 0.43
ARHGEF40-208ENST00000557498 TAF1P21675 1872 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms