RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 CWC25Q9NXE8 425 aaPredicted RBP13.22□□□□□ -0.29
TGFB3-207ENST00000557493 NUP98P52948 1817 aa13.21□□□□□ -0.29
TGFB3-207ENST00000557493 NBPF7P0C2Y1 421 aaPredicted RBP13.21□□□□□ -0.29
TGFB3-207ENST00000557493 DDR1Q08345 913 aa13.21□□□□□ -0.29
TGFB3-207ENST00000557493 TCIRG1Q13488 830 aa13.21□□□□□ -0.29
TGFB3-207ENST00000557493 FAM161AQ3B820 660 aa13.21□□□□□ -0.29
TGFB3-207ENST00000557493 GIGYF2Q6Y7W6 1299 aaKnown RBP13.21□□□□□ -0.29
TGFB3-207ENST00000557493 SIRT2Q8IXJ6 389 aa13.21□□□□□ -0.29
TGFB3-207ENST00000557493 RGL2O15211 777 aa13.2□□□□□ -0.3
TGFB3-207ENST00000557493 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
TGFB3-207ENST00000557493 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
TGFB3-207ENST00000557493 ISCA1Q9BUE6 129 aa13.2□□□□□ -0.3
TGFB3-207ENST00000557493 SRP68Q9UHB9 627 aaKnown RBP13.2□□□□□ -0.3
TGFB3-207ENST00000557493 ZNF652Q9Y2D9 606 aa13.2□□□□□ -0.3
TGFB3-207ENST00000557493 USP42Q9H9J4 1324 aaKnown RBP13.19□□□□□ -0.3
TGFB3-207ENST00000557493 ATP5J2-PTCD1G3V325 749 aa13.19□□□□□ -0.3
TGFB3-207ENST00000557493 MTX1Q13505 466 aa13.19□□□□□ -0.3
TGFB3-207ENST00000557493 DPY19L2Q6NUT2 758 aa13.19□□□□□ -0.3
TGFB3-207ENST00000557493 DCTPP1Q9H773 170 aa13.19□□□□□ -0.3
TGFB3-207ENST00000557493 ZBTB47Q9UFB7 747 aaPredicted RBP13.19□□□□□ -0.3
TGFB3-207ENST00000557493 PDZRN3Q9UPQ7 1066 aa13.19□□□□□ -0.3
TGFB3-207ENST00000557493 CNTNAP1P78357 1384 aa13.19□□□□□ -0.3
TGFB3-207ENST00000557493 POTECB2RU33 542 aa13.18□□□□□ -0.3
TGFB3-207ENST00000557493 POLRMTO00411 1230 aaKnown RBP13.18□□□□□ -0.3
TGFB3-207ENST00000557493 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
TGFB3-207ENST00000557493 SSH3Q8TE77 659 aa13.18□□□□□ -0.3
TGFB3-207ENST00000557493 SUCLG2Q96I99 432 aa13.18□□□□□ -0.3
TGFB3-207ENST00000557493 SRGAP3O43295 1099 aa13.17□□□□□ -0.3
TGFB3-207ENST00000557493 NUCB1Q02818 461 aa13.17□□□□□ -0.3
TGFB3-207ENST00000557493 UBE3BQ7Z3V4 1068 aa13.17□□□□□ -0.3
TGFB3-207ENST00000557493 ABHD8Q96I13 439 aa13.17□□□□□ -0.3
TGFB3-207ENST00000557493 TBC1D2BQ9UPU7 963 aa13.17□□□□□ -0.3
TGFB3-207ENST00000557493 PNMA6EA0A0J9YXQ4 647 aa13.16□□□□□ -0.3
TGFB3-207ENST00000557493 H7C1W4 665 aa13.16□□□□□ -0.3
TGFB3-207ENST00000557493 CAMTA2O94983 1202 aa13.16□□□□□ -0.3
TGFB3-207ENST00000557493 POLA2Q14181 598 aa13.16□□□□□ -0.3
TGFB3-207ENST00000557493 HLFQ16534 295 aa13.16□□□□□ -0.3
TGFB3-207ENST00000557493 PPP1R42Q7Z4L9 355 aa13.16□□□□□ -0.3
TGFB3-207ENST00000557493 CHD1LQ86WJ1 897 aa13.16□□□□□ -0.3
TGFB3-207ENST00000557493 TTLL6Q8N841 843 aa13.16□□□□□ -0.3
TGFB3-207ENST00000557493 BICC1Q9H694 974 aaKnown RBP13.16□□□□□ -0.3
TGFB3-207ENST00000557493 SBF1O95248 1867 aa13.16□□□□□ -0.3
TGFB3-207ENST00000557493 LAMB2P55268 1798 aa13.15□□□□□ -0.3
TGFB3-207ENST00000557493 NFKBIEO00221 500 aa13.15□□□□□ -0.3
TGFB3-207ENST00000557493 NPM3O75607 178 aaKnown RBP13.15□□□□□ -0.3
TGFB3-207ENST00000557493 PCCAP05165 728 aaPredicted RBP13.15□□□□□ -0.3
TGFB3-207ENST00000557493 TM4SF1P30408 202 aa13.15□□□□□ -0.3
TGFB3-207ENST00000557493 RGS3P49796 1198 aa13.15□□□□□ -0.3
TGFB3-207ENST00000557493 LBX1P52954 281 aa13.15□□□□□ -0.3
TGFB3-207ENST00000557493 CASP7P55210 303 aa13.15□□□□□ -0.3
TGFB3-207ENST00000557493 MLLT1Q03111 559 aaPredicted RBP13.15□□□□□ -0.3
TGFB3-207ENST00000557493 PARP10Q53GL7 1025 aa13.15□□□□□ -0.3
TGFB3-207ENST00000557493 HSP90AB4PQ58FF6 505 aa13.15□□□□□ -0.3
TGFB3-207ENST00000557493 CLEC4GQ6UXB4 293 aa13.15□□□□□ -0.3
TGFB3-207ENST00000557493 NLRP10Q86W26 655 aa13.15□□□□□ -0.3
TGFB3-207ENST00000557493 ZBTB38Q8NAP3 1195 aaPredicted RBP13.15□□□□□ -0.3
TGFB3-207ENST00000557493 CDHR2Q9BYE9 1310 aa13.14□□□□□ -0.31
TGFB3-207ENST00000557493 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
TGFB3-207ENST00000557493 ZPR1O75312 459 aa13.14□□□□□ -0.31
TGFB3-207ENST00000557493 GPTP24298 496 aa13.14□□□□□ -0.31
TGFB3-207ENST00000557493 RABL6Q3YEC7 729 aaPredicted RBP13.14□□□□□ -0.31
TGFB3-207ENST00000557493 ANKRD45Q5TZF3 282 aa13.14□□□□□ -0.31
TGFB3-207ENST00000557493 ZNF34Q8IZ26 560 aa13.14□□□□□ -0.31
TGFB3-207ENST00000557493 KAZALD1Q96I82 304 aa13.14□□□□□ -0.31
TGFB3-207ENST00000557493 WBP1LQ9NX94 342 aa13.14□□□□□ -0.31
TGFB3-207ENST00000557493 VEGFBP49765 207 aa13.13□□□□□ -0.31
TGFB3-207ENST00000557493 LNPKQ9C0E8 428 aa13.13□□□□□ -0.31
TGFB3-207ENST00000557493 NARFQ9UHQ1 456 aa13.13□□□□□ -0.31
TGFB3-207ENST00000557493 MYH3P11055 1940 aa13.13□□□□□ -0.31
TGFB3-207ENST00000557493 HSP90B1P14625 803 aaKnown RBP13.12□□□□□ -0.31
TGFB3-207ENST00000557493 ERFEQ4G0M1 354 aa13.12□□□□□ -0.31
TGFB3-207ENST00000557493 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
TGFB3-207ENST00000557493 PLA2G12BQ9BX93 195 aa13.12□□□□□ -0.31
TGFB3-207ENST00000557493 LRRCC1Q9C099 1032 aa13.12□□□□□ -0.31
TGFB3-207ENST00000557493 EXOC6BQ9Y2D4 811 aa13.12□□□□□ -0.31
TGFB3-207ENST00000557493 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
TGFB3-207ENST00000557493 PASKQ96RG2 1323 aa13.12□□□□□ -0.31
TGFB3-207ENST00000557493 TIAM2Q8IVF5 1701 aa13.11□□□□□ -0.31
TGFB3-207ENST00000557493 H0YIN7 160 aa13.11□□□□□ -0.31
TGFB3-207ENST00000557493 SURF6O75683 361 aaKnown RBP13.11□□□□□ -0.31
TGFB3-207ENST00000557493 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
TGFB3-207ENST00000557493 POTEJP0CG39 1038 aa13.11□□□□□ -0.31
TGFB3-207ENST00000557493 HSPA8P11142 646 aaKnown RBP13.11□□□□□ -0.31
TGFB3-207ENST00000557493 USPL1Q5W0Q7 1092 aa13.11□□□□□ -0.31
TGFB3-207ENST00000557493 SKAP1Q86WV1 359 aa13.11□□□□□ -0.31
TGFB3-207ENST00000557493 C2CD5Q86YS7 1000 aa13.11□□□□□ -0.31
TGFB3-207ENST00000557493 TRMT112Q9UI30 125 aaKnown RBP13.11□□□□□ -0.31
TGFB3-207ENST00000557493 NIP7Q9Y221 180 aaKnown RBP eCLIP13.11□□□□□ -0.31
TGFB3-207ENST00000557493 NOP58Q9Y2X3 529 aaKnown RBP13.11□□□□□ -0.31
TGFB3-207ENST00000557493 SH3TC1Q8TE82 1336 aa13.11□□□□□ -0.31
TGFB3-207ENST00000557493 TMEM88BA6NKF7 163 aa13.1□□□□□ -0.31
TGFB3-207ENST00000557493 PDE4AP27815 886 aa13.1□□□□□ -0.31
TGFB3-207ENST00000557493 FOXO4P98177 505 aa13.1□□□□□ -0.31
TGFB3-207ENST00000557493 OS9Q13438 667 aaPredicted RBP13.1□□□□□ -0.31
TGFB3-207ENST00000557493 NFIXQ14938 502 aa13.1□□□□□ -0.31
TGFB3-207ENST00000557493 EPHA10Q5JZY3 1008 aa13.1□□□□□ -0.31
TGFB3-207ENST00000557493 LDHDQ86WU2 507 aa13.1□□□□□ -0.31
TGFB3-207ENST00000557493 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
TGFB3-207ENST00000557493 KIF1BPQ96EK5 621 aa13.1□□□□□ -0.31
TGFB3-207ENST00000557493 UTP14AQ9BVJ6 771 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms