RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TSKSQ9UJT2 592 aa18.48■□□□□ 0.55
SLIRP-210ENST00000557431 AOC2O75106 756 aa18.47■□□□□ 0.55
SLIRP-210ENST00000557431 DPP8Q6V1X1 898 aaPredicted RBP18.47■□□□□ 0.55
SLIRP-210ENST00000557431 MPNDQ8N594 471 aa18.47■□□□□ 0.55
SLIRP-210ENST00000557431 GLIS2Q9BZE0 524 aaPredicted RBP18.47■□□□□ 0.55
SLIRP-210ENST00000557431 CHPF2Q9P2E5 772 aa18.47■□□□□ 0.55
SLIRP-210ENST00000557431 TCIRG1Q13488 830 aa18.46■□□□□ 0.55
SLIRP-210ENST00000557431 GRIPAP1Q4V328 841 aa18.46■□□□□ 0.55
SLIRP-210ENST00000557431 RTL5Q5HYW3 569 aaPredicted RBP18.46■□□□□ 0.55
SLIRP-210ENST00000557431 TRPM4Q8TD43 1214 aa18.46■□□□□ 0.55
SLIRP-210ENST00000557431 TMX4Q9H1E5 349 aaPredicted RBP18.46■□□□□ 0.55
SLIRP-210ENST00000557431 ADARB2Q9NS39 739 aaKnown RBP18.46■□□□□ 0.55
SLIRP-210ENST00000557431 ZNRF3Q9ULT6 936 aa18.46■□□□□ 0.55
SLIRP-210ENST00000557431 YDJCA8MPS7 323 aa18.45■□□□□ 0.54
SLIRP-210ENST00000557431 CIAPIN1Q6FI81 312 aa18.45■□□□□ 0.54
SLIRP-210ENST00000557431 DLK2Q6UY11 383 aa18.45■□□□□ 0.54
SLIRP-210ENST00000557431 DDX46Q7L014 1031 aaKnown RBP18.45■□□□□ 0.54
SLIRP-210ENST00000557431 SP8Q8IXZ3 490 aa18.45■□□□□ 0.54
SLIRP-210ENST00000557431 BCL2L13Q9BXK5 485 aa18.45■□□□□ 0.54
SLIRP-210ENST00000557431 RTFDC1Q9BY42 306 aaPredicted RBP18.45■□□□□ 0.54
SLIRP-210ENST00000557431 ZNF408Q9H9D4 720 aa18.45■□□□□ 0.54
SLIRP-210ENST00000557431 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
SLIRP-210ENST00000557431 ATP5J2-PTCD1G3V325 749 aa18.44■□□□□ 0.54
SLIRP-210ENST00000557431 HIRAP54198 1017 aaPredicted RBP18.44■□□□□ 0.54
SLIRP-210ENST00000557431 KIAA2012Q0VF49 1180 aa18.44■□□□□ 0.54
SLIRP-210ENST00000557431 GRAPQ13588 217 aa18.44■□□□□ 0.54
SLIRP-210ENST00000557431 HSP90AB3PQ58FF7 597 aa18.44■□□□□ 0.54
SLIRP-210ENST00000557431 GRAPLQ8TC17 118 aaPredicted RBP18.44■□□□□ 0.54
SLIRP-210ENST00000557431 GPR101Q96P66 508 aaPredicted RBP18.44■□□□□ 0.54
SLIRP-210ENST00000557431 TRIM35Q9UPQ4 493 aa18.44■□□□□ 0.54
SLIRP-210ENST00000557431 TLL2Q9Y6L7 1015 aa18.44■□□□□ 0.54
SLIRP-210ENST00000557431 PSME4Q14997 1843 aa18.44■□□□□ 0.54
SLIRP-210ENST00000557431 CELF2O95319 508 aaKnown RBP18.43■□□□□ 0.54
SLIRP-210ENST00000557431 MAP2K1Q02750 393 aaPredicted RBP18.43■□□□□ 0.54
SLIRP-210ENST00000557431 SUPT20HQ8NEM7 779 aa18.43■□□□□ 0.54
SLIRP-210ENST00000557431 CELF1Q92879 486 aaKnown RBP18.43■□□□□ 0.54
SLIRP-210ENST00000557431 ZBTB12Q9Y330 459 aaPredicted RBP18.43■□□□□ 0.54
SLIRP-210ENST00000557431 BBOX1O75936 387 aa18.42■□□□□ 0.54
SLIRP-210ENST00000557431 LMOD3Q0VAK6 560 aa18.42■□□□□ 0.54
SLIRP-210ENST00000557431 DDX10Q13206 875 aaKnown RBP18.42■□□□□ 0.54
SLIRP-210ENST00000557431 RALBP1Q15311 655 aa18.42■□□□□ 0.54
SLIRP-210ENST00000557431 FAM89AQ96GI7 184 aa18.42■□□□□ 0.54
SLIRP-210ENST00000557431 MYH3P11055 1940 aa18.42■□□□□ 0.54
SLIRP-210ENST00000557431 AKAP11Q9UKA4 1901 aa18.41■□□□□ 0.54
SLIRP-210ENST00000557431 CHL1O00533 1208 aa18.41■□□□□ 0.54
SLIRP-210ENST00000557431 RIMBP2O15034 1052 aa18.41■□□□□ 0.54
SLIRP-210ENST00000557431 HDGFL1Q5TGJ6 251 aa18.41■□□□□ 0.54
SLIRP-210ENST00000557431 ABHD8Q96I13 439 aa18.41■□□□□ 0.54
SLIRP-210ENST00000557431 DBNDD1Q9H9R9 158 aa18.41■□□□□ 0.54
SLIRP-210ENST00000557431 BABAM1Q9NWV8 329 aa18.41■□□□□ 0.54
SLIRP-210ENST00000557431 ECE1P42892 770 aa18.4■□□□□ 0.54
SLIRP-210ENST00000557431 MYBBP1AQ9BQG0 1328 aaKnown RBP18.4■□□□□ 0.54
SLIRP-210ENST00000557431 SAPCD2Q86UD0 394 aa18.39■□□□□ 0.53
SLIRP-210ENST00000557431 VPS33BQ9H267 617 aa18.39■□□□□ 0.53
SLIRP-210ENST00000557431 KCNQ5Q9NR82 932 aa18.39■□□□□ 0.53
SLIRP-210ENST00000557431 CNOT7Q9UIV1 285 aaKnown RBP18.39■□□□□ 0.53
SLIRP-210ENST00000557431 PSMD14O00487 310 aa18.38■□□□□ 0.53
SLIRP-210ENST00000557431 EGFRP00533 1210 aa18.38■□□□□ 0.53
SLIRP-210ENST00000557431 SAMD7Q7Z3H4 446 aa18.38■□□□□ 0.53
SLIRP-210ENST00000557431 MICALL2Q8IY33 904 aa18.38■□□□□ 0.53
SLIRP-210ENST00000557431 PLBD2Q8NHP8 589 aa18.38■□□□□ 0.53
SLIRP-210ENST00000557431 RUNDC1Q96C34 613 aa18.38■□□□□ 0.53
SLIRP-210ENST00000557431 ZIC5Q96T25 663 aa18.38■□□□□ 0.53
SLIRP-210ENST00000557431 ISCA1Q9BUE6 129 aa18.38■□□□□ 0.53
SLIRP-210ENST00000557431 NSFL1CQ9UNZ2 370 aaKnown RBP18.38■□□□□ 0.53
SLIRP-210ENST00000557431 GPSM2P81274 684 aa18.37■□□□□ 0.53
SLIRP-210ENST00000557431 TNIP1Q15025 636 aa18.37■□□□□ 0.53
SLIRP-210ENST00000557431 DOK7Q18PE1 504 aa18.37■□□□□ 0.53
SLIRP-210ENST00000557431 TBC1D10BQ4KMP7 808 aaPredicted RBP18.37■□□□□ 0.53
SLIRP-210ENST00000557431 ANKRD13DQ6ZTN6 518 aa18.37■□□□□ 0.53
SLIRP-210ENST00000557431 USP48Q86UV5 1035 aa18.37■□□□□ 0.53
SLIRP-210ENST00000557431 JARID2Q92833 1246 aaPredicted RBP18.37■□□□□ 0.53
SLIRP-210ENST00000557431 BEGAINQ9BUH8 593 aa18.37■□□□□ 0.53
SLIRP-210ENST00000557431 C6orf229H3BNL8 230 aa18.36■□□□□ 0.53
SLIRP-210ENST00000557431 ZNF646O15015 1829 aaPredicted RBP18.36■□□□□ 0.53
SLIRP-210ENST00000557431 WDR43Q15061 677 aaKnown RBP eCLIP18.36■□□□□ 0.53
SLIRP-210ENST00000557431 RBM26Q5T8P6 1007 aaKnown RBP18.36■□□□□ 0.53
SLIRP-210ENST00000557431 DUSP27Q5VZP5 1158 aa18.36■□□□□ 0.53
SLIRP-210ENST00000557431 POLLQ9UGP5 575 aa18.36■□□□□ 0.53
SLIRP-210ENST00000557431 PGAP2Q9UHJ9 254 aa18.36■□□□□ 0.53
SLIRP-210ENST00000557431 ADAMTS8Q9UP79 889 aa18.36■□□□□ 0.53
SLIRP-210ENST00000557431 RTL9Q8NET4 1388 aa18.35■□□□□ 0.53
SLIRP-210ENST00000557431 CDHR2Q9BYE9 1310 aa18.35■□□□□ 0.53
SLIRP-210ENST00000557431 ELL2O00472 640 aaPredicted RBP18.35■□□□□ 0.53
SLIRP-210ENST00000557431 WASHC4Q2M389 1173 aa18.35■□□□□ 0.53
SLIRP-210ENST00000557431 PHAXQ9H814 394 aaKnown RBP18.35■□□□□ 0.53
SLIRP-210ENST00000557431 SEC31BQ9NQW1 1179 aa18.35■□□□□ 0.53
SLIRP-210ENST00000557431 MBIPQ9NS73 344 aa18.35■□□□□ 0.53
SLIRP-210ENST00000557431 CCDC85CA6NKD9 419 aa18.34■□□□□ 0.53
SLIRP-210ENST00000557431 H7C1D1 291 aa18.34■□□□□ 0.53
SLIRP-210ENST00000557431 IRS4O14654 1257 aaPredicted RBP18.34■□□□□ 0.53
SLIRP-210ENST00000557431 ECE2O60344 883 aa18.34■□□□□ 0.53
SLIRP-210ENST00000557431 SF3B3Q15393 1217 aaKnown RBP18.34■□□□□ 0.53
SLIRP-210ENST00000557431 FAM161AQ3B820 660 aa18.34■□□□□ 0.53
SLIRP-210ENST00000557431 CCDC85AQ96PX6 553 aaPredicted RBP18.34■□□□□ 0.53
SLIRP-210ENST00000557431 ASTN2O75129 1339 aaPredicted RBP18.33■□□□□ 0.53
SLIRP-210ENST00000557431 ADM5C9JUS6 153 aa18.33■□□□□ 0.52
SLIRP-210ENST00000557431 CDC37L1Q7L3B6 337 aa18.33■□□□□ 0.52
SLIRP-210ENST00000557431 DBF4Q9UBU7 674 aaPredicted RBP18.33■□□□□ 0.52
SLIRP-210ENST00000557431 MAP2K2P36507 400 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms