RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 DLEC1Q9Y238 1755 aa9.95□□□□□ -0.82
PSEN1-222ENST00000557356 ANKRD31Q8N7Z5 1873 aa9.95□□□□□ -0.82
PSEN1-222ENST00000557356 CACNA1FO60840 1977 aa9.94□□□□□ -0.82
PSEN1-222ENST00000557356 ABCC4O15439 1325 aa9.94□□□□□ -0.82
PSEN1-222ENST00000557356 BRPF1P55201 1214 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-222ENST00000557356 RASSF7Q02833 373 aa9.94□□□□□ -0.82
PSEN1-222ENST00000557356 CWF19L2Q2TBE0 894 aaKnown RBP9.94□□□□□ -0.82
PSEN1-222ENST00000557356 BEND3Q5T5X7 828 aa9.94□□□□□ -0.82
PSEN1-222ENST00000557356 SLC4A10Q6U841 1118 aa9.94□□□□□ -0.82
PSEN1-222ENST00000557356 DPP8Q6V1X1 898 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-222ENST00000557356 C3orf67Q6ZVT6 689 aa9.94□□□□□ -0.82
PSEN1-222ENST00000557356 C16orf71Q8IYS4 520 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-222ENST00000557356 PLA2G12BQ9BX93 195 aa9.94□□□□□ -0.82
PSEN1-222ENST00000557356 SMC4Q9NTJ3 1288 aa9.94□□□□□ -0.82
PSEN1-222ENST00000557356 C9orf78Q9NZ63 289 aaPredicted RBP9.94□□□□□ -0.82
PSEN1-222ENST00000557356 SRCAPQ6ZRS2 3230 aa9.94□□□□□ -0.82
PSEN1-222ENST00000557356 VEGFAP15692 232 aaPredicted RBP9.93□□□□□ -0.82
PSEN1-222ENST00000557356 IARSP41252 1262 aaKnown RBP9.93□□□□□ -0.82
PSEN1-222ENST00000557356 CTSWP56202 376 aa9.93□□□□□ -0.82
PSEN1-222ENST00000557356 UBE3BQ7Z3V4 1068 aa9.93□□□□□ -0.82
PSEN1-222ENST00000557356 ANKRD18AQ8IVF6 992 aa9.93□□□□□ -0.82
PSEN1-222ENST00000557356 SSH1Q8WYL5 1049 aa9.93□□□□□ -0.82
PSEN1-222ENST00000557356 ARHGAP45Q92619 1136 aa9.93□□□□□ -0.82
PSEN1-222ENST00000557356 RTFDC1Q9BY42 306 aaPredicted RBP9.93□□□□□ -0.82
PSEN1-222ENST00000557356 API5Q9BZZ5 524 aaKnown RBP9.93□□□□□ -0.82
PSEN1-222ENST00000557356 ANKRD36CQ5JPF3 1778 aa9.93□□□□□ -0.82
PSEN1-222ENST00000557356 F6X3S4 739 aa9.92□□□□□ -0.82
PSEN1-222ENST00000557356 GRM8O00222 908 aa9.92□□□□□ -0.82
PSEN1-222ENST00000557356 EIF6P56537 245 aaKnown RBP9.92□□□□□ -0.82
PSEN1-222ENST00000557356 LARGE2Q8N3Y3 721 aa9.92□□□□□ -0.82
PSEN1-222ENST00000557356 TTLL11Q8NHH1 800 aa9.92□□□□□ -0.82
PSEN1-222ENST00000557356 ZNF526Q8TF50 670 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-222ENST00000557356 EYA3Q99504 573 aa9.92□□□□□ -0.82
PSEN1-222ENST00000557356 RNF216Q9NWF9 866 aaPredicted RBP9.92□□□□□ -0.82
PSEN1-222ENST00000557356 NSFL1CQ9UNZ2 370 aaKnown RBP9.92□□□□□ -0.82
PSEN1-222ENST00000557356 SLX4Q8IY92 1834 aa9.91□□□□□ -0.82
PSEN1-222ENST00000557356 RTL9Q8NET4 1388 aa9.91□□□□□ -0.82
PSEN1-222ENST00000557356 ZBED9Q6R2W3 1325 aa9.91□□□□□ -0.82
PSEN1-222ENST00000557356 KIF16BQ96L93 1317 aa9.91□□□□□ -0.82
PSEN1-222ENST00000557356 IQCA1LA6NCM1 817 aa9.91□□□□□ -0.82
PSEN1-222ENST00000557356 TOMM70O94826 608 aa9.91□□□□□ -0.82
PSEN1-222ENST00000557356 CSF1RP07333 972 aa9.91□□□□□ -0.82
PSEN1-222ENST00000557356 IGHMBP2P38935 993 aaKnown RBP9.91□□□□□ -0.82
PSEN1-222ENST00000557356 CCT4P50991 539 aaKnown RBP9.91□□□□□ -0.82
PSEN1-222ENST00000557356 NIM1KQ8IY84 436 aa9.91□□□□□ -0.82
PSEN1-222ENST00000557356 ZNF277Q9NRM2 450 aaPredicted RBP9.91□□□□□ -0.82
PSEN1-222ENST00000557356 ARFGEF2Q9Y6D5 1785 aa9.91□□□□□ -0.82
PSEN1-222ENST00000557356 ANKRD18BA2A2Z9 1011 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 G3V3G9 751 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 FZD9O00144 591 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 PPIP5K2O43314 1243 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 RARSP54136 660 aaKnown RBP9.9□□□□□ -0.82
PSEN1-222ENST00000557356 C1QTNF8P60827 252 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 IFIT5Q13325 482 aaKnown RBP9.9□□□□□ -0.82
PSEN1-222ENST00000557356 WASHC4Q2M389 1173 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 CCDC57Q2TAC2 916 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 DCAF8Q5TAQ9 597 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 JARID2Q92833 1246 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-222ENST00000557356 CELF1Q92879 486 aaKnown RBP9.9□□□□□ -0.82
PSEN1-222ENST00000557356 MPHOSPH8Q99549 860 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 ZC3H12CQ9C0D7 883 aaKnown RBP9.9□□□□□ -0.82
PSEN1-222ENST00000557356 BSDC1Q9NW68 430 aaPredicted RBP9.9□□□□□ -0.82
PSEN1-222ENST00000557356 PODXL2Q9NZ53 605 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 ANKIB1Q9P2G1 1089 aa9.9□□□□□ -0.82
PSEN1-222ENST00000557356 COL11A2P13942 1736 aaPredicted RBP9.9□□□□□ -0.83
PSEN1-222ENST00000557356 C6orf229H3BNL8 230 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 ATP2B4P23634 1241 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 PRELPP51888 382 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 CASP7P55210 303 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 KIAA2012Q0VF49 1180 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 TNIP1Q15025 636 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 OLFM4Q6UX06 510 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 GPC2Q8N158 579 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 BCL2L13Q9BXK5 485 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 ANKRD2Q9GZV1 360 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 RRAGCQ9HB90 399 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 SEC31BQ9NQW1 1179 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 ZNRF3Q9ULT6 936 aa9.89□□□□□ -0.83
PSEN1-222ENST00000557356 NOB1Q9ULX3 412 aaKnown RBP9.89□□□□□ -0.83
PSEN1-222ENST00000557356 UTYO14607 1347 aa9.88□□□□□ -0.83
PSEN1-222ENST00000557356 XDHP47989 1333 aa9.88□□□□□ -0.83
PSEN1-222ENST00000557356 KIF3CO14782 793 aa9.88□□□□□ -0.83
PSEN1-222ENST00000557356 ITGA6P23229 1130 aa9.88□□□□□ -0.83
PSEN1-222ENST00000557356 TAF7LQ5H9L4 462 aa9.88□□□□□ -0.83
PSEN1-222ENST00000557356 RBM46Q8TBY0 533 aaKnown RBP9.88□□□□□ -0.83
PSEN1-222ENST00000557356 L3MBTL3Q96JM7 780 aaPredicted RBP9.88□□□□□ -0.83
PSEN1-222ENST00000557356 GREM2Q9H772 168 aa9.88□□□□□ -0.83
PSEN1-222ENST00000557356 GGA1Q9UJY5 639 aa9.88□□□□□ -0.83
PSEN1-222ENST00000557356 LEMD3Q9Y2U8 911 aa9.88□□□□□ -0.83
PSEN1-222ENST00000557356 FER1L6Q2WGJ9 1857 aa9.87□□□□□ -0.83
PSEN1-222ENST00000557356 TNRC6CQ9HCJ0 1690 aaKnown RBP9.87□□□□□ -0.83
PSEN1-222ENST00000557356 DDNO94850 711 aaPredicted RBP9.87□□□□□ -0.83
PSEN1-222ENST00000557356 LMOD1P29536 600 aaPredicted RBP9.87□□□□□ -0.83
PSEN1-222ENST00000557356 GPSM2P81274 684 aa9.87□□□□□ -0.83
PSEN1-222ENST00000557356 FOXO4P98177 505 aa9.87□□□□□ -0.83
PSEN1-222ENST00000557356 FSTL1Q12841 308 aa9.87□□□□□ -0.83
PSEN1-222ENST00000557356 AOC3Q16853 763 aa9.87□□□□□ -0.83
PSEN1-222ENST00000557356 LMBR1LQ6UX01 489 aa9.87□□□□□ -0.83
PSEN1-222ENST00000557356 PNMA8AQ86V59 439 aaPredicted RBP9.87□□□□□ -0.83
PSEN1-222ENST00000557356 CCDC85AQ96PX6 553 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms