RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 CC2D2BQ6DHV5 1058 aa21.22■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 FKBP4Q02790 459 aaKnown RBP eCLIP21.21■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 CCDC152Q4G0S7 254 aa21.21■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 ZNF526Q8TF50 670 aaPredicted RBP21.21■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 CCDC85AQ96PX6 553 aaPredicted RBP21.21■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 SRCIN1Q9C0H9 1055 aa21.21■□□□□ 0.99
TVP23C-CDRT4-204ENST00000557349 H7C1W4 665 aa21.2■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 BBOX1O75936 387 aa21.2■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 CTSWP56202 376 aa21.2■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 ATP6V0A2Q9Y487 856 aa21.2■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 PRELPP51888 382 aa21.19■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 RARSP54136 660 aaKnown RBP21.19■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 MYH3P11055 1940 aa21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 ALDH1L1O75891 902 aa21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 GRIPAP1Q4V328 841 aa21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 TMC4Q7Z404 712 aa21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 SLC51AQ86UW1 340 aa21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 CELF1Q92879 486 aaKnown RBP21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 GPBP1L1Q9HC44 474 aaPredicted RBP21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 KIF16BQ96L93 1317 aa21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 ZC3H4Q9UPT8 1303 aaKnown RBP21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 SNED1Q8TER0 1413 aa21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 TAF1P21675 1872 aa21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 CCDC88AQ3V6T2 1871 aa21.18■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 ZNF277Q9NRM2 450 aaPredicted RBP21.17■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 C9orf78Q9NZ63 289 aaPredicted RBP21.17■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 GRM8O00222 908 aa21.16■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 SP8Q8IXZ3 490 aa21.16■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 PSMD1Q99460 953 aa21.16■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 SEC31BQ9NQW1 1179 aa21.16■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 NOB1Q9ULX3 412 aaKnown RBP21.16■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 LRRC37AA6NMS7 1700 aa21.15■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 COL4A1P02462 1669 aa21.15■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 CASP7P55210 303 aa21.15■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 PLA2G12BQ9BX93 195 aa21.15■□□□□ 0.98
TVP23C-CDRT4-204ENST00000557349 IARSP41252 1262 aaKnown RBP21.14■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 BRPF1P55201 1214 aaPredicted RBP21.14■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 RPS8P62241 208 aaKnown RBP21.14■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 DPP8Q6V1X1 898 aaPredicted RBP21.14■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 TTLL11Q8NHH1 800 aa21.14■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 CDC5LQ99459 802 aaKnown RBP21.14■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 API5Q9BZZ5 524 aaKnown RBP21.14■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 DICER1Q9UPY3 1922 aaKnown RBP21.14■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 KDM2BQ8NHM5 1336 aa21.13■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 ANKRD18AQ8IVF6 992 aa21.13■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 MPNDQ8N594 471 aa21.13■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 GREM2Q9H772 168 aa21.13■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 RTL9Q8NET4 1388 aa21.12■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 SUPT20HQ8NEM7 779 aa21.12■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 FAM161AQ3B820 660 aa21.11■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 FRAT1Q92837 279 aaPredicted RBP21.11■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 CHMP3Q9Y3E7 222 aa21.11■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 PPIP5K2O43314 1243 aa21.1■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 CCT4P50991 539 aaKnown RBP21.1■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 LARGE2Q8N3Y3 721 aa21.1■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 JDP2Q8WYK2 163 aa21.1■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 NSFL1CQ9UNZ2 370 aaKnown RBP21.1■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 SPEF2Q9C093 1822 aa21.09■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 IPO8O15397 1037 aaKnown RBP21.09■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 BCAR3O75815 825 aa21.09■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 ITGA6P23229 1130 aa21.09■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 DPY19L2Q6NUT2 758 aa21.09■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 NBPF7P0C2Y1 421 aaPredicted RBP21.08■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 IGHMBP2P38935 993 aaKnown RBP21.08■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 AOC3Q16853 763 aa21.08■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 ARHGAP45Q92619 1136 aa21.08■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 RTFDC1Q9BY42 306 aaPredicted RBP21.08■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 DUOX1Q9NRD9 1551 aa21.08■□□□□ 0.97
TVP23C-CDRT4-204ENST00000557349 GLTPD2A6NH11 291 aa21.07■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 CSF1RP07333 972 aa21.07■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 GPSM2P81274 684 aa21.07■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 FOXO4P98177 505 aa21.07■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 NIM1KQ8IY84 436 aa21.07■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 SUCLG2Q96I99 432 aa21.07■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 NMRK2Q9NPI5 230 aa21.07■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 ANKIB1Q9P2G1 1089 aa21.07■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 UTYO14607 1347 aa21.06■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 ANKRD18BA2A2Z9 1011 aa21.06■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 C6orf229H3BNL8 230 aa21.06■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 IFIT5Q13325 482 aaKnown RBP21.06■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 EPHA10Q5JZY3 1008 aa21.06■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 LMBR1LQ6UX01 489 aa21.06■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 COL4A5P29400 1685 aa21.05■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 LTBP1Q14766 1721 aa21.05■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 ATF7IPQ6VMQ6 1270 aa21.05■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 MPHOSPH8Q99549 860 aa21.05■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 VPS33BQ9H267 617 aa21.05■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 BSDC1Q9NW68 430 aaPredicted RBP21.05■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 UFL1O94874 794 aa21.04■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 TRIM27P14373 513 aa21.04■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 CCDC57Q2TAC2 916 aa21.04■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 TAF7LQ5H9L4 462 aa21.04■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 ZKSCAN2Q63HK3 967 aa21.04■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 XDHP47989 1333 aa21.04■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 ZNF541Q9H0D2 1346 aa21.04■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 EIF6P56537 245 aaKnown RBP21.03■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 KIAA2012Q0VF49 1180 aa21.03■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 EYA3Q99504 573 aa21.03■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 USP44Q9H0E7 712 aa21.03■□□□□ 0.96
TVP23C-CDRT4-204ENST00000557349 BICC1Q9H694 974 aaKnown RBP21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms