RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 SMG9Q9H0W8 520 aaKnown RBP4.48□□□□□ -1.69
PTPN21-209ENST00000557249 ATP9BO43861 1147 aa4.47□□□□□ -1.69
PTPN21-209ENST00000557249 EIF2AK2P19525 551 aaKnown RBP4.47□□□□□ -1.69
PTPN21-209ENST00000557249 SEC13P55735 322 aa4.47□□□□□ -1.69
PTPN21-209ENST00000557249 SIX5Q8N196 739 aa4.47□□□□□ -1.69
PTPN21-209ENST00000557249 TRPM4Q8TD43 1214 aa4.47□□□□□ -1.69
PTPN21-209ENST00000557249 RBSNQ9H1K0 784 aa4.47□□□□□ -1.69
PTPN21-209ENST00000557249 DLL1O00548 723 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 C21orf2O43822 256 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 SASH3O75995 380 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 GLB1P16278 677 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 RASA1P20936 1047 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 TARSP26639 723 aaKnown RBP4.46□□□□□ -1.7
PTPN21-209ENST00000557249 IDH3AP50213 366 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 ARSDP51689 593 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 GPLD1P80108 840 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 GRIK5Q16478 980 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 HFE2Q6ZVN8 426 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 ILDR2Q71H61 639 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 DZIP1LQ8IYY4 767 aaKnown RBP4.46□□□□□ -1.7
PTPN21-209ENST00000557249 VTI1AQ96AJ9 217 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 SRA1Q9HD15 236 aaKnown RBP4.46□□□□□ -1.7
PTPN21-209ENST00000557249 C11orf16Q9NQ32 467 aa4.46□□□□□ -1.7
PTPN21-209ENST00000557249 ZBTB42B2RXF5 422 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 DEAF1O75398 565 aaPredicted RBP4.45□□□□□ -1.7
PTPN21-209ENST00000557249 ALX3O95076 343 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 GHRHP01286 108 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 GRIK1P39086 918 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 CD97P48960 835 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 NRLP54845 237 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 HDGFL1Q5TGJ6 251 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 GDF6Q6KF10 455 aaPredicted RBP4.45□□□□□ -1.7
PTPN21-209ENST00000557249 LARP1Q6PKG0 1096 aaKnown RBP4.45□□□□□ -1.7
PTPN21-209ENST00000557249 MAP4K3Q8IVH8 894 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 TMEM130Q8N3G9 435 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 STOML1Q9UBI4 398 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 TIMELESSQ9UNS1 1208 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 RAXQ9Y2V3 346 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 RNF114Q9Y508 228 aa4.45□□□□□ -1.7
PTPN21-209ENST00000557249 KRTAP4-8A0A0G2JLE6 195 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 F8W735 103 aaPredicted RBP4.44□□□□□ -1.7
PTPN21-209ENST00000557249 IGLV1-40P01703 118 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 PSAPP07602 524 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 TAL1P17542 331 aaPredicted RBP4.44□□□□□ -1.7
PTPN21-209ENST00000557249 INPP5BP32019 993 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 GP2P55259 537 aaKnown RBP4.44□□□□□ -1.7
PTPN21-209ENST00000557249 PLAURQ03405 335 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 IL22RA1Q8N6P7 574 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 PLD4Q96BZ4 506 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 IFT43Q96FT9 208 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 FMNL2Q96PY5 1086 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 KLK14Q9P0G3 267 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 ZFATQ9P243 1243 aa4.44□□□□□ -1.7
PTPN21-209ENST00000557249 DMGDHQ9UI17 866 aaKnown RBP4.44□□□□□ -1.7
PTPN21-209ENST00000557249 DHX15O43143 795 aaKnown RBP4.43□□□□□ -1.7
PTPN21-209ENST00000557249 DGKZQ13574 1117 aa4.43□□□□□ -1.7
PTPN21-209ENST00000557249 INTS5Q6P9B9 1019 aaKnown RBP4.43□□□□□ -1.7
PTPN21-209ENST00000557249 MUC3BQ9H195 1237 aa4.43□□□□□ -1.7
PTPN21-209ENST00000557249 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.43□□□□□ -1.7
PTPN21-209ENST00000557249 TLR7Q9NYK1 1049 aaKnown RBP4.43□□□□□ -1.7
PTPN21-209ENST00000557249 LOC102724428A0A0B4J2F2 783 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 POM121CA8CG34 1229 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 J3QW42 95 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 MICAL2O94851 1124 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 UBTFP17480 764 aaKnown RBP4.42□□□□□ -1.7
PTPN21-209ENST00000557249 IGFBP4P22692 258 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 SIK1P57059 783 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 C11orf91Q3C1V1 193 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 CACTIN-AS1Q8N1I8 211 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 POM121Q96HA1 1249 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 CEP41Q9BYV8 373 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 BCS1LQ9Y276 419 aa4.42□□□□□ -1.7
PTPN21-209ENST00000557249 OAS3Q9Y6K5 1087 aaKnown RBP4.42□□□□□ -1.7
PTPN21-209ENST00000557249 XYLBO75191 536 aa4.41□□□□□ -1.7
PTPN21-209ENST00000557249 TGFB1P01137 390 aa4.41□□□□□ -1.7
PTPN21-209ENST00000557249 CMTR1Q8N1G2 835 aaKnown RBP4.41□□□□□ -1.7
PTPN21-209ENST00000557249 AGGF1Q8N302 714 aaeCLIP4.41□□□□□ -1.7
PTPN21-209ENST00000557249 ADAMTS19Q8TE59 1207 aa4.41□□□□□ -1.7
PTPN21-209ENST00000557249 NSUN5Q96P11 429 aaKnown RBP4.41□□□□□ -1.7
PTPN21-209ENST00000557249 UCN2Q96RP3 112 aa4.41□□□□□ -1.7
PTPN21-209ENST00000557249 RTCBQ9Y3I0 505 aaKnown RBP4.41□□□□□ -1.7
PTPN21-209ENST00000557249 FAM177BA6PVY3 158 aa4.4□□□□□ -1.71
PTPN21-209ENST00000557249 KIAA1324LA8MWY0 1029 aaPredicted RBP4.4□□□□□ -1.71
PTPN21-209ENST00000557249 LGR5O75473 907 aa4.4□□□□□ -1.71
PTPN21-209ENST00000557249 DKK1O94907 266 aa4.4□□□□□ -1.71
PTPN21-209ENST00000557249 GRNP28799 593 aaKnown RBP4.4□□□□□ -1.71
PTPN21-209ENST00000557249 FZD5Q13467 585 aa4.4□□□□□ -1.71
PTPN21-209ENST00000557249 SETDB1Q15047 1291 aa4.4□□□□□ -1.71
PTPN21-209ENST00000557249 RGL4Q8IZJ4 473 aa4.4□□□□□ -1.71
PTPN21-209ENST00000557249 UTP4Q969X6 686 aaKnown RBP4.4□□□□□ -1.71
PTPN21-209ENST00000557249 PPME1Q9Y570 386 aa4.4□□□□□ -1.71
PTPN21-209ENST00000557249 ARID1BQ8NFD5 2236 aaPredicted RBP4.4□□□□□ -1.71
PTPN21-209ENST00000557249 MED26O95402 600 aa4.39□□□□□ -1.71
PTPN21-209ENST00000557249 WNT11O96014 354 aa4.39□□□□□ -1.71
PTPN21-209ENST00000557249 NFIAQ12857 509 aa4.39□□□□□ -1.71
PTPN21-209ENST00000557249 DPYDQ12882 1025 aa4.39□□□□□ -1.71
PTPN21-209ENST00000557249 FAM117BQ6P1L5 589 aa4.39□□□□□ -1.71
PTPN21-209ENST00000557249 Q6ZS46 218 aa4.39□□□□□ -1.71
PTPN21-209ENST00000557249 ACAD11Q709F0 780 aa4.39□□□□□ -1.71
PTPN21-209ENST00000557249 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms