RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 EFCC1Q9HA90 598 aa16.99■□□□□ 0.31
ABCD4-226ENST00000556971 GGA3Q9NZ52 723 aa16.99■□□□□ 0.31
ABCD4-226ENST00000556971 STAP2Q9UGK3 403 aa16.99■□□□□ 0.31
ABCD4-226ENST00000556971 FAM177BA6PVY3 158 aa16.98■□□□□ 0.31
ABCD4-226ENST00000556971 STARD3NLO95772 234 aa16.98■□□□□ 0.31
ABCD4-226ENST00000556971 TNIP1Q15025 636 aa16.98■□□□□ 0.31
ABCD4-226ENST00000556971 RBM26Q5T8P6 1007 aaKnown RBP16.98■□□□□ 0.31
ABCD4-226ENST00000556971 SHISA4Q96DD7 197 aa16.98■□□□□ 0.31
ABCD4-226ENST00000556971 PIEZO1Q92508 2521 aa16.98■□□□□ 0.31
ABCD4-226ENST00000556971 UBE2Q2LH0YL09 131 aa16.97■□□□□ 0.31
ABCD4-226ENST00000556971 CAP1Q01518 475 aa16.97■□□□□ 0.31
ABCD4-226ENST00000556971 SLC52A2Q9HAB3 445 aa16.97■□□□□ 0.31
ABCD4-226ENST00000556971 ASTN2O75129 1339 aaPredicted RBP16.96■□□□□ 0.31
ABCD4-226ENST00000556971 FKBP1BP68106 108 aa16.96■□□□□ 0.31
ABCD4-226ENST00000556971 EIF4A2Q14240 407 aaKnown RBP16.96■□□□□ 0.31
ABCD4-226ENST00000556971 GRIPAP1Q4V328 841 aa16.96■□□□□ 0.31
ABCD4-226ENST00000556971 AMOTQ4VCS5 1084 aa16.96■□□□□ 0.31
ABCD4-226ENST00000556971 NBPF11Q86T75 865 aa16.96■□□□□ 0.31
ABCD4-226ENST00000556971 VSIG10Q8N0Z9 540 aa16.96■□□□□ 0.31
ABCD4-226ENST00000556971 HTATIP2Q9BUP3 242 aa16.96■□□□□ 0.31
ABCD4-226ENST00000556971 KDM3BQ7LBC6 1761 aa16.95■□□□□ 0.3
ABCD4-226ENST00000556971 UBR2Q8IWV8 1755 aa16.95■□□□□ 0.3
ABCD4-226ENST00000556971 PRUNE2Q8WUY3 3088 aa16.95■□□□□ 0.3
ABCD4-226ENST00000556971 PRAMEF22A3QJZ6 481 aa16.95■□□□□ 0.3
ABCD4-226ENST00000556971 PTCH2Q9Y6C5 1203 aa16.95■□□□□ 0.3
ABCD4-226ENST00000556971 LAMA2P24043 3122 aaKnown RBP16.94■□□□□ 0.3
ABCD4-226ENST00000556971 PPEF1O14829 653 aaPredicted RBP16.94■□□□□ 0.3
ABCD4-226ENST00000556971 MAP3K12Q12852 859 aa16.94■□□□□ 0.3
ABCD4-226ENST00000556971 TPTE2Q6XPS3 522 aa16.94■□□□□ 0.3
ABCD4-226ENST00000556971 ABCC12Q96J65 1359 aa16.93■□□□□ 0.3
ABCD4-226ENST00000556971 ALDH1A1P00352 501 aa16.93■□□□□ 0.3
ABCD4-226ENST00000556971 IL6STP40189 918 aaPredicted RBP16.93■□□□□ 0.3
ABCD4-226ENST00000556971 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
ABCD4-226ENST00000556971 DZIP3Q86Y13 1208 aaKnown RBP16.93■□□□□ 0.3
ABCD4-226ENST00000556971 PUS7Q96PZ0 661 aaKnown RBP16.93■□□□□ 0.3
ABCD4-226ENST00000556971 NPM2Q86SE8 214 aaKnown RBP16.92■□□□□ 0.3
ABCD4-226ENST00000556971 YDJCA8MPS7 323 aa16.91■□□□□ 0.3
ABCD4-226ENST00000556971 TNFRSF10AO00220 468 aa16.91■□□□□ 0.3
ABCD4-226ENST00000556971 KIF4BQ2VIQ3 1234 aa16.91■□□□□ 0.3
ABCD4-226ENST00000556971 SH3TC2Q8TF17 1288 aa16.91■□□□□ 0.3
ABCD4-226ENST00000556971 SYMPKQ92797 1274 aaKnown RBP16.91■□□□□ 0.3
ABCD4-226ENST00000556971 RPGRQ92834 1020 aaKnown RBP16.91■□□□□ 0.3
ABCD4-226ENST00000556971 GUCD1Q96NT3 240 aa16.91■□□□□ 0.3
ABCD4-226ENST00000556971 VPS33BQ9H267 617 aa16.91■□□□□ 0.3
ABCD4-226ENST00000556971 DPF2Q92785 391 aa16.9■□□□□ 0.3
ABCD4-226ENST00000556971 BCAMP50895 628 aa16.89■□□□□ 0.29
ABCD4-226ENST00000556971 TTLL12Q14166 644 aaPredicted RBP16.89■□□□□ 0.29
ABCD4-226ENST00000556971 LGR6Q9HBX8 967 aa16.89■□□□□ 0.29
ABCD4-226ENST00000556971 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.29
ABCD4-226ENST00000556971 SYNGAP1Q96PV0 1343 aa16.89■□□□□ 0.29
ABCD4-226ENST00000556971 RIC1Q4ADV7 1423 aa16.88■□□□□ 0.29
ABCD4-226ENST00000556971 GTF2E1P29083 439 aaPredicted RBP16.88■□□□□ 0.29
ABCD4-226ENST00000556971 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
ABCD4-226ENST00000556971 LRIT3Q3SXY7 679 aa16.88■□□□□ 0.29
ABCD4-226ENST00000556971 UBE2Q1Q7Z7E8 422 aa16.88■□□□□ 0.29
ABCD4-226ENST00000556971 IFNL1Q8IU54 200 aa16.88■□□□□ 0.29
ABCD4-226ENST00000556971 L3MBTL2Q969R5 705 aa16.88■□□□□ 0.29
ABCD4-226ENST00000556971 IRS2Q9Y4H2 1338 aa16.88■□□□□ 0.29
ABCD4-226ENST00000556971 PSMD14O00487 310 aa16.87■□□□□ 0.29
ABCD4-226ENST00000556971 A1BGP04217 495 aa16.87■□□□□ 0.29
ABCD4-226ENST00000556971 KIAA2012Q0VF49 1180 aa16.87■□□□□ 0.29
ABCD4-226ENST00000556971 AEBP1Q8IUX7 1158 aa16.87■□□□□ 0.29
ABCD4-226ENST00000556971 SUPT20HQ8NEM7 779 aa16.87■□□□□ 0.29
ABCD4-226ENST00000556971 ANGEL2Q5VTE6 544 aaKnown RBP16.86■□□□□ 0.29
ABCD4-226ENST00000556971 SCAF8Q9UPN6 1271 aaKnown RBP16.86■□□□□ 0.29
ABCD4-226ENST00000556971 ZNF652Q9Y2D9 606 aa16.86■□□□□ 0.29
ABCD4-226ENST00000556971 IGF2BP3O00425 579 aaKnown RBP eCLIP16.85■□□□□ 0.29
ABCD4-226ENST00000556971 EVI5O60447 810 aa16.85■□□□□ 0.29
ABCD4-226ENST00000556971 HOXA10P31260 410 aaPredicted RBP16.85■□□□□ 0.29
ABCD4-226ENST00000556971 SP3Q02447 781 aa16.85■□□□□ 0.29
ABCD4-226ENST00000556971 CRHR2Q13324 411 aa16.85■□□□□ 0.29
ABCD4-226ENST00000556971 CLEC4GQ6UXB4 293 aa16.85■□□□□ 0.29
ABCD4-226ENST00000556971 NUTM1Q86Y26 1132 aa16.85■□□□□ 0.29
ABCD4-226ENST00000556971 FAM161BQ96MY7 647 aa16.85■□□□□ 0.29
ABCD4-226ENST00000556971 RTFDC1Q9BY42 306 aaPredicted RBP16.85■□□□□ 0.29
ABCD4-226ENST00000556971 KIF7Q2M1P5 1343 aa16.85■□□□□ 0.29
ABCD4-226ENST00000556971 PIP4K2AP48426 406 aaPredicted RBP16.84■□□□□ 0.29
ABCD4-226ENST00000556971 TCIRG1Q13488 830 aa16.84■□□□□ 0.29
ABCD4-226ENST00000556971 PRAMEF18Q5VWM3 479 aa16.84■□□□□ 0.29
ABCD4-226ENST00000556971 GDF15Q99988 308 aa16.84■□□□□ 0.29
ABCD4-226ENST00000556971 TMX4Q9H1E5 349 aaPredicted RBP16.84■□□□□ 0.29
ABCD4-226ENST00000556971 POLKQ9UBT6 870 aa16.84■□□□□ 0.29
ABCD4-226ENST00000556971 ZNF646O15015 1829 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-226ENST00000556971 BMP8BP34820 402 aa16.83■□□□□ 0.28
ABCD4-226ENST00000556971 MTFR1Q15390 333 aa16.83■□□□□ 0.28
ABCD4-226ENST00000556971 SPRYD7Q5W111 196 aa16.83■□□□□ 0.28
ABCD4-226ENST00000556971 TTC5Q8N0Z6 440 aa16.83■□□□□ 0.28
ABCD4-226ENST00000556971 MAFAQ8NHW3 353 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-226ENST00000556971 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
ABCD4-226ENST00000556971 ECM2O94769 699 aaPredicted RBP16.82■□□□□ 0.28
ABCD4-226ENST00000556971 DPP8Q6V1X1 898 aaPredicted RBP16.82■□□□□ 0.28
ABCD4-226ENST00000556971 RBM17Q96I25 401 aaKnown RBP16.82■□□□□ 0.28
ABCD4-226ENST00000556971 ZNF496Q96IT1 587 aaPredicted RBP16.82■□□□□ 0.28
ABCD4-226ENST00000556971 CRAMP1Q96RY5 1269 aa16.82■□□□□ 0.28
ABCD4-226ENST00000556971 HEG1Q9ULI3 1381 aa16.81■□□□□ 0.28
ABCD4-226ENST00000556971 PTPN12Q05209 780 aaKnown RBP16.81■□□□□ 0.28
ABCD4-226ENST00000556971 ATP6V0A2Q9Y487 856 aa16.81■□□□□ 0.28
ABCD4-226ENST00000556971 TAF1P21675 1872 aa16.81■□□□□ 0.28
ABCD4-226ENST00000556971 ALPK3Q96L96 1907 aa16.8■□□□□ 0.28
ABCD4-226ENST00000556971 MANSC4A6NHS7 340 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms