RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 BBOX1O75936 387 aa29.1■■■□□ 2.25
TDP1-216ENST00000556867 GRIPAP1Q4V328 841 aa29.1■■■□□ 2.25
TDP1-216ENST00000556867 JARID2Q92833 1246 aaPredicted RBP29.1■■■□□ 2.25
TDP1-216ENST00000556867 BEND3Q5T5X7 828 aa29.09■■■□□ 2.25
TDP1-216ENST00000556867 ATP6V0A2Q9Y487 856 aa29.09■■■□□ 2.25
TDP1-216ENST00000556867 H7C1W4 665 aa29.08■■■□□ 2.25
TDP1-216ENST00000556867 PSMD1Q99460 953 aa29.08■■■□□ 2.25
TDP1-216ENST00000556867 PTPRCP08575 1304 aa29.08■■■□□ 2.25
TDP1-216ENST00000556867 LRRC37AA6NMS7 1700 aa29.08■■■□□ 2.25
TDP1-216ENST00000556867 GPBP1L1Q9HC44 474 aaPredicted RBP29.07■■■□□ 2.24
TDP1-216ENST00000556867 UBE3BQ7Z3V4 1068 aa29.06■■■□□ 2.24
TDP1-216ENST00000556867 TMC4Q7Z404 712 aa29.06■■■□□ 2.24
TDP1-216ENST00000556867 SLC51AQ86UW1 340 aa29.06■■■□□ 2.24
TDP1-216ENST00000556867 ZNF526Q8TF50 670 aaPredicted RBP29.06■■■□□ 2.24
TDP1-216ENST00000556867 BCL2L13Q9BXK5 485 aa29.06■■■□□ 2.24
TDP1-216ENST00000556867 COL4A1P02462 1669 aa29.05■■■□□ 2.24
TDP1-216ENST00000556867 ZBED9Q6R2W3 1325 aa29.05■■■□□ 2.24
TDP1-216ENST00000556867 CCDC152Q4G0S7 254 aa29.05■■■□□ 2.24
TDP1-216ENST00000556867 TMX4Q9H1E5 349 aaPredicted RBP29.05■■■□□ 2.24
TDP1-216ENST00000556867 SMC4Q9NTJ3 1288 aa29.05■■■□□ 2.24
TDP1-216ENST00000556867 CASP7P55210 303 aa29.04■■■□□ 2.24
TDP1-216ENST00000556867 CTSWP56202 376 aa29.04■■■□□ 2.24
TDP1-216ENST00000556867 SP8Q8IXZ3 490 aa29.04■■■□□ 2.24
TDP1-216ENST00000556867 CELF1Q92879 486 aaKnown RBP29.04■■■□□ 2.24
TDP1-216ENST00000556867 PLA2G12BQ9BX93 195 aa29.03■■■□□ 2.24
TDP1-216ENST00000556867 ZNF277Q9NRM2 450 aaPredicted RBP29.03■■■□□ 2.24
TDP1-216ENST00000556867 ALDH1L1O75891 902 aa29.02■■■□□ 2.24
TDP1-216ENST00000556867 BRPF1P55201 1214 aaPredicted RBP29.01■■■□□ 2.23
TDP1-216ENST00000556867 SLC4A10Q6U841 1118 aa29.01■■■□□ 2.23
TDP1-216ENST00000556867 IARSP41252 1262 aaKnown RBP29■■■□□ 2.23
TDP1-216ENST00000556867 TTLL11Q8NHH1 800 aa29■■■□□ 2.23
TDP1-216ENST00000556867 SRCIN1Q9C0H9 1055 aa29■■■□□ 2.23
TDP1-216ENST00000556867 SEC31BQ9NQW1 1179 aa29■■■□□ 2.23
TDP1-216ENST00000556867 RTL9Q8NET4 1388 aa29■■■□□ 2.23
TDP1-216ENST00000556867 KDM2BQ8NHM5 1336 aa28.99■■■□□ 2.23
TDP1-216ENST00000556867 RARSP54136 660 aaKnown RBP28.99■■■□□ 2.23
TDP1-216ENST00000556867 RPS8P62241 208 aaKnown RBP28.99■■■□□ 2.23
TDP1-216ENST00000556867 CCDC85AQ96PX6 553 aaPredicted RBP28.98■■■□□ 2.23
TDP1-216ENST00000556867 RTFDC1Q9BY42 306 aaPredicted RBP28.98■■■□□ 2.23
TDP1-216ENST00000556867 GRM8O00222 908 aa28.97■■■□□ 2.23
TDP1-216ENST00000556867 DUOX1Q9NRD9 1551 aa28.96■■■□□ 2.23
TDP1-216ENST00000556867 GLTPD2A6NH11 291 aa28.96■■■□□ 2.23
TDP1-216ENST00000556867 DPP8Q6V1X1 898 aaPredicted RBP28.96■■■□□ 2.23
TDP1-216ENST00000556867 MPNDQ8N594 471 aa28.96■■■□□ 2.23
TDP1-216ENST00000556867 LTBP1Q14766 1721 aa28.95■■■□□ 2.23
TDP1-216ENST00000556867 SUPT20HQ8NEM7 779 aa28.95■■■□□ 2.22
TDP1-216ENST00000556867 GREM2Q9H772 168 aa28.95■■■□□ 2.22
TDP1-216ENST00000556867 COL4A5P29400 1685 aa28.94■■■□□ 2.22
TDP1-216ENST00000556867 CDC5LQ99459 802 aaKnown RBP28.94■■■□□ 2.22
TDP1-216ENST00000556867 VPS33BQ9H267 617 aa28.94■■■□□ 2.22
TDP1-216ENST00000556867 NMRK2Q9NPI5 230 aa28.94■■■□□ 2.22
TDP1-216ENST00000556867 KIF3CO14782 793 aa28.93■■■□□ 2.22
TDP1-216ENST00000556867 CSF1RP07333 972 aa28.93■■■□□ 2.22
TDP1-216ENST00000556867 ANKRD18AQ8IVF6 992 aa28.93■■■□□ 2.22
TDP1-216ENST00000556867 C9orf78Q9NZ63 289 aaPredicted RBP28.93■■■□□ 2.22
TDP1-216ENST00000556867 KIF16BQ96L93 1317 aa28.93■■■□□ 2.22
TDP1-216ENST00000556867 DPY19L2Q6NUT2 758 aa28.92■■■□□ 2.22
TDP1-216ENST00000556867 NOB1Q9ULX3 412 aaKnown RBP28.92■■■□□ 2.22
TDP1-216ENST00000556867 SPEF2Q9C093 1822 aa28.92■■■□□ 2.22
TDP1-216ENST00000556867 WDR90Q96KV7 1748 aa28.91■■■□□ 2.22
TDP1-216ENST00000556867 LARGE2Q8N3Y3 721 aa28.91■■■□□ 2.22
TDP1-216ENST00000556867 UTYO14607 1347 aa28.91■■■□□ 2.22
TDP1-216ENST00000556867 FZD9O00144 591 aa28.9■■■□□ 2.22
TDP1-216ENST00000556867 PPIP5K2O43314 1243 aa28.9■■■□□ 2.22
TDP1-216ENST00000556867 FOXO4P98177 505 aa28.9■■■□□ 2.22
TDP1-216ENST00000556867 FAM161AQ3B820 660 aa28.9■■■□□ 2.22
TDP1-216ENST00000556867 JDP2Q8WYK2 163 aa28.9■■■□□ 2.22
TDP1-216ENST00000556867 API5Q9BZZ5 524 aaKnown RBP28.9■■■□□ 2.22
TDP1-216ENST00000556867 GPSM2P81274 684 aa28.89■■■□□ 2.22
TDP1-216ENST00000556867 AOC3Q16853 763 aa28.89■■■□□ 2.22
TDP1-216ENST00000556867 NSFL1CQ9UNZ2 370 aaKnown RBP28.89■■■□□ 2.22
TDP1-216ENST00000556867 ZNF541Q9H0D2 1346 aa28.88■■■□□ 2.21
TDP1-216ENST00000556867 ITGA6P23229 1130 aa28.87■■■□□ 2.21
TDP1-216ENST00000556867 KIAA2012Q0VF49 1180 aa28.87■■■□□ 2.21
TDP1-216ENST00000556867 ARHGAP45Q92619 1136 aa28.87■■■□□ 2.21
TDP1-216ENST00000556867 PODXL2Q9NZ53 605 aa28.87■■■□□ 2.21
TDP1-216ENST00000556867 NBPF7P0C2Y1 421 aaPredicted RBP28.86■■■□□ 2.21
TDP1-216ENST00000556867 EPHA10Q5JZY3 1008 aa28.86■■■□□ 2.21
TDP1-216ENST00000556867 NIM1KQ8IY84 436 aa28.86■■■□□ 2.21
TDP1-216ENST00000556867 RRAGCQ9HB90 399 aa28.86■■■□□ 2.21
TDP1-216ENST00000556867 BSDC1Q9NW68 430 aaPredicted RBP28.86■■■□□ 2.21
TDP1-216ENST00000556867 DDNO94850 711 aaPredicted RBP28.85■■■□□ 2.21
TDP1-216ENST00000556867 CCT4P50991 539 aaKnown RBP28.85■■■□□ 2.21
TDP1-216ENST00000556867 IGHMBP2P38935 993 aaKnown RBP28.84■■■□□ 2.21
TDP1-216ENST00000556867 C1QTNF8P60827 252 aa28.84■■■□□ 2.21
TDP1-216ENST00000556867 LMBR1LQ6UX01 489 aa28.84■■■□□ 2.21
TDP1-216ENST00000556867 SUCLG2Q96I99 432 aa28.84■■■□□ 2.21
TDP1-216ENST00000556867 POLLQ9UGP5 575 aa28.84■■■□□ 2.21
TDP1-216ENST00000556867 BCAR3O75815 825 aa28.83■■■□□ 2.21
TDP1-216ENST00000556867 VEGFAP15692 232 aaPredicted RBP28.83■■■□□ 2.21
TDP1-216ENST00000556867 TBC1D16Q8TBP0 767 aa28.83■■■□□ 2.21
TDP1-216ENST00000556867 KAZALD1Q96I82 304 aa28.83■■■□□ 2.21
TDP1-216ENST00000556867 USP44Q9H0E7 712 aa28.83■■■□□ 2.21
TDP1-216ENST00000556867 ANKRD18BA2A2Z9 1011 aa28.82■■■□□ 2.2
TDP1-216ENST00000556867 C6orf229H3BNL8 230 aa28.82■■■□□ 2.2
TDP1-216ENST00000556867 EIF6P56537 245 aaKnown RBP28.82■■■□□ 2.2
TDP1-216ENST00000556867 L3MBTL3Q96JM7 780 aaPredicted RBP28.82■■■□□ 2.2
TDP1-216ENST00000556867 ANKIB1Q9P2G1 1089 aa28.82■■■□□ 2.2
TDP1-216ENST00000556867 XDHP47989 1333 aa28.82■■■□□ 2.2
TDP1-216ENST00000556867 SCN4AP35499 1836 aa28.81■■■□□ 2.2
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