RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 TMX4Q9H1E5 349 aaPredicted RBP13.41□□□□□ -0.26
MTHFD1-214ENST00000556771 KIF16BQ96L93 1317 aa13.4□□□□□ -0.26
MTHFD1-214ENST00000556771 FER1L6Q2WGJ9 1857 aa13.4□□□□□ -0.26
MTHFD1-214ENST00000556771 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
MTHFD1-214ENST00000556771 F6X3S4 739 aa13.4□□□□□ -0.26
MTHFD1-214ENST00000556771 ALDH1L1O75891 902 aa13.4□□□□□ -0.26
MTHFD1-214ENST00000556771 BBOX1O75936 387 aa13.4□□□□□ -0.26
MTHFD1-214ENST00000556771 CWF19L2Q2TBE0 894 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-214ENST00000556771 BEND3Q5T5X7 828 aa13.4□□□□□ -0.26
MTHFD1-214ENST00000556771 ZC3H4Q9UPT8 1303 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 H7C1W4 665 aa13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 NFKBIEO00221 500 aa13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 PPEF1O14829 653 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 LMNB1P20700 586 aa13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 RARSP54136 660 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 GRAPQ13588 217 aa13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 CCDC152Q4G0S7 254 aa13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 RTL5Q5HYW3 569 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 GRAPLQ8TC17 118 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 TAOK3Q9H2K8 898 aa13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 ABCC4O15439 1325 aa13.39□□□□□ -0.27
MTHFD1-214ENST00000556771 SBF1O95248 1867 aa13.38□□□□□ -0.27
MTHFD1-214ENST00000556771 FKBP4Q02790 459 aaKnown RBP eCLIP13.38□□□□□ -0.27
MTHFD1-214ENST00000556771 C9orf131Q5VYM1 1079 aa13.38□□□□□ -0.27
MTHFD1-214ENST00000556771 SLC4A10Q6U841 1118 aa13.38□□□□□ -0.27
MTHFD1-214ENST00000556771 UBE3BQ7Z3V4 1068 aa13.38□□□□□ -0.27
MTHFD1-214ENST00000556771 PLA2G12BQ9BX93 195 aa13.38□□□□□ -0.27
MTHFD1-214ENST00000556771 BCL2L13Q9BXK5 485 aa13.38□□□□□ -0.27
MTHFD1-214ENST00000556771 RNF181Q9P0P0 153 aa13.38□□□□□ -0.27
MTHFD1-214ENST00000556771 MYH3P11055 1940 aa13.38□□□□□ -0.27
MTHFD1-214ENST00000556771 RTL9Q8NET4 1388 aa13.37□□□□□ -0.27
MTHFD1-214ENST00000556771 DSG3P32926 999 aa13.37□□□□□ -0.27
MTHFD1-214ENST00000556771 CTSWP56202 376 aa13.37□□□□□ -0.27
MTHFD1-214ENST00000556771 RASSF7Q02833 373 aa13.37□□□□□ -0.27
MTHFD1-214ENST00000556771 ARHGAP45Q92619 1136 aa13.37□□□□□ -0.27
MTHFD1-214ENST00000556771 PSMD1Q99460 953 aa13.37□□□□□ -0.27
MTHFD1-214ENST00000556771 API5Q9BZZ5 524 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-214ENST00000556771 ATP6V0A2Q9Y487 856 aa13.37□□□□□ -0.27
MTHFD1-214ENST00000556771 SNED1Q8TER0 1413 aa13.37□□□□□ -0.27
MTHFD1-214ENST00000556771 GRM8O00222 908 aa13.36□□□□□ -0.27
MTHFD1-214ENST00000556771 IPO8O15397 1037 aaKnown RBP13.36□□□□□ -0.27
MTHFD1-214ENST00000556771 CASP7P55210 303 aa13.36□□□□□ -0.27
MTHFD1-214ENST00000556771 SP8Q8IXZ3 490 aa13.36□□□□□ -0.27
MTHFD1-214ENST00000556771 C9orf78Q9NZ63 289 aaPredicted RBP13.36□□□□□ -0.27
MTHFD1-214ENST00000556771 ZNF784Q8NCA9 323 aaPredicted RBP13.35□□□□□ -0.27
MTHFD1-214ENST00000556771 JARID2Q92833 1246 aaPredicted RBP13.35□□□□□ -0.27
MTHFD1-214ENST00000556771 CDC5LQ99459 802 aaKnown RBP13.35□□□□□ -0.27
MTHFD1-214ENST00000556771 LRRC37AA6NMS7 1700 aa13.35□□□□□ -0.27
MTHFD1-214ENST00000556771 DICER1Q9UPY3 1922 aaKnown RBP13.35□□□□□ -0.27
MTHFD1-214ENST00000556771 CCT4P50991 539 aaKnown RBP13.34□□□□□ -0.27
MTHFD1-214ENST00000556771 RPS8P62241 208 aaKnown RBP13.34□□□□□ -0.27
MTHFD1-214ENST00000556771 SUPT20HQ8NEM7 779 aa13.34□□□□□ -0.27
MTHFD1-214ENST00000556771 TTLL11Q8NHH1 800 aa13.34□□□□□ -0.27
MTHFD1-214ENST00000556771 VPS33BQ9H267 617 aa13.34□□□□□ -0.27
MTHFD1-214ENST00000556771 NOB1Q9ULX3 412 aaKnown RBP13.34□□□□□ -0.27
MTHFD1-214ENST00000556771 GOLGB1Q14789 3259 aaKnown RBP13.34□□□□□ -0.27
MTHFD1-214ENST00000556771 UTYO14607 1347 aa13.34□□□□□ -0.27
MTHFD1-214ENST00000556771 CCDC88AQ3V6T2 1871 aa13.33□□□□□ -0.27
MTHFD1-214ENST00000556771 CSF1RP07333 972 aa13.33□□□□□ -0.28
MTHFD1-214ENST00000556771 ANKRD18AQ8IVF6 992 aa13.33□□□□□ -0.28
MTHFD1-214ENST00000556771 CELF1Q92879 486 aaKnown RBP13.33□□□□□ -0.28
MTHFD1-214ENST00000556771 TIAM2Q8IVF5 1701 aa13.33□□□□□ -0.28
MTHFD1-214ENST00000556771 PRELPP51888 382 aa13.32□□□□□ -0.28
MTHFD1-214ENST00000556771 OLFM4Q6UX06 510 aa13.32□□□□□ -0.28
MTHFD1-214ENST00000556771 DPP8Q6V1X1 898 aaPredicted RBP13.32□□□□□ -0.28
MTHFD1-214ENST00000556771 MPNDQ8N594 471 aa13.32□□□□□ -0.28
MTHFD1-214ENST00000556771 RTFDC1Q9BY42 306 aaPredicted RBP13.32□□□□□ -0.28
MTHFD1-214ENST00000556771 HDAC5Q9UQL6 1122 aa13.32□□□□□ -0.28
MTHFD1-214ENST00000556771 KDM2BQ8NHM5 1336 aa13.32□□□□□ -0.28
MTHFD1-214ENST00000556771 UTRNP46939 3433 aa13.31□□□□□ -0.28
MTHFD1-214ENST00000556771 IARSP41252 1262 aaKnown RBP13.31□□□□□ -0.28
MTHFD1-214ENST00000556771 GREM2Q9H772 168 aa13.31□□□□□ -0.28
MTHFD1-214ENST00000556771 GPBP1L1Q9HC44 474 aaPredicted RBP13.31□□□□□ -0.28
MTHFD1-214ENST00000556771 SEC31BQ9NQW1 1179 aa13.31□□□□□ -0.28
MTHFD1-214ENST00000556771 ZNF277Q9NRM2 450 aaPredicted RBP13.31□□□□□ -0.28
MTHFD1-214ENST00000556771 TAF1P21675 1872 aa13.31□□□□□ -0.28
MTHFD1-214ENST00000556771 BCAR3O75815 825 aa13.3□□□□□ -0.28
MTHFD1-214ENST00000556771 ITGA6P23229 1130 aa13.3□□□□□ -0.28
MTHFD1-214ENST00000556771 IGHMBP2P38935 993 aaKnown RBP13.3□□□□□ -0.28
MTHFD1-214ENST00000556771 FOXO4P98177 505 aa13.3□□□□□ -0.28
MTHFD1-214ENST00000556771 DPY19L2Q6NUT2 758 aa13.3□□□□□ -0.28
MTHFD1-214ENST00000556771 ATF7IPQ6VMQ6 1270 aa13.3□□□□□ -0.28
MTHFD1-214ENST00000556771 JDP2Q8WYK2 163 aa13.3□□□□□ -0.28
MTHFD1-214ENST00000556771 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
MTHFD1-214ENST00000556771 BSDC1Q9NW68 430 aaPredicted RBP13.3□□□□□ -0.28
MTHFD1-214ENST00000556771 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
MTHFD1-214ENST00000556771 IFIT5Q13325 482 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-214ENST00000556771 FAM161AQ3B820 660 aa13.29□□□□□ -0.28
MTHFD1-214ENST00000556771 ZKSCAN2Q63HK3 967 aa13.29□□□□□ -0.28
MTHFD1-214ENST00000556771 INTS3Q68E01 1043 aaKnown RBP13.29□□□□□ -0.28
MTHFD1-214ENST00000556771 CCDC85AQ96PX6 553 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-214ENST00000556771 USP44Q9H0E7 712 aa13.29□□□□□ -0.28
MTHFD1-214ENST00000556771 PODXL2Q9NZ53 605 aa13.29□□□□□ -0.28
MTHFD1-214ENST00000556771 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
MTHFD1-214ENST00000556771 GLTPD2A6NH11 291 aa13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 NBPF7P0C2Y1 421 aaPredicted RBP13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 TRIM27P14373 513 aa13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 CCDC57Q2TAC2 916 aa13.28□□□□□ -0.28
MTHFD1-214ENST00000556771 LMBR1LQ6UX01 489 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms