RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 SPEF2Q9C093 1822 aa13.27□□□□□ -0.28
SHMT2-224ENST00000556737 FZD9O00144 591 aa13.27□□□□□ -0.29
SHMT2-224ENST00000556737 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
SHMT2-224ENST00000556737 PCCAP05165 728 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-224ENST00000556737 VEGFAP15692 232 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-224ENST00000556737 GRIPAP1Q4V328 841 aa13.27□□□□□ -0.29
SHMT2-224ENST00000556737 KSR2Q6VAB6 950 aa13.27□□□□□ -0.29
SHMT2-224ENST00000556737 DDX46Q7L014 1031 aaKnown RBP13.27□□□□□ -0.29
SHMT2-224ENST00000556737 L3MBTL3Q96JM7 780 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-224ENST00000556737 CWC25Q9NXE8 425 aaPredicted RBP13.27□□□□□ -0.29
SHMT2-224ENST00000556737 FLIIQ13045 1269 aa13.26□□□□□ -0.29
SHMT2-224ENST00000556737 DPY19L2Q6NUT2 758 aa13.26□□□□□ -0.29
SHMT2-224ENST00000556737 SP8Q8IXZ3 490 aa13.26□□□□□ -0.29
SHMT2-224ENST00000556737 C16orf71Q8IYS4 520 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-224ENST00000556737 CELF1Q92879 486 aaKnown RBP13.26□□□□□ -0.29
SHMT2-224ENST00000556737 RTFDC1Q9BY42 306 aaPredicted RBP13.26□□□□□ -0.29
SHMT2-224ENST00000556737 CDHR2Q9BYE9 1310 aa13.26□□□□□ -0.29
SHMT2-224ENST00000556737 MYH16Q9H6N6 1097 aa13.26□□□□□ -0.29
SHMT2-224ENST00000556737 BBOX1O75936 387 aa13.25□□□□□ -0.29
SHMT2-224ENST00000556737 FSTL1Q12841 308 aa13.25□□□□□ -0.29
SHMT2-224ENST00000556737 NEURL1BA8MQ27 555 aa13.24□□□□□ -0.29
SHMT2-224ENST00000556737 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
SHMT2-224ENST00000556737 AOC3Q16853 763 aa13.24□□□□□ -0.29
SHMT2-224ENST00000556737 CWF19L2Q2TBE0 894 aaKnown RBP13.24□□□□□ -0.29
SHMT2-224ENST00000556737 TMC4Q7Z404 712 aa13.24□□□□□ -0.29
SHMT2-224ENST00000556737 SMC1BQ8NDV3 1235 aa13.24□□□□□ -0.29
SHMT2-224ENST00000556737 JARID2Q92833 1246 aaPredicted RBP13.24□□□□□ -0.29
SHMT2-224ENST00000556737 PDE8AO60658 829 aa13.23□□□□□ -0.29
SHMT2-224ENST00000556737 POTEIP0CG38 1075 aa13.23□□□□□ -0.29
SHMT2-224ENST00000556737 POTEJP0CG39 1038 aa13.23□□□□□ -0.29
SHMT2-224ENST00000556737 DPP8Q6V1X1 898 aaPredicted RBP13.23□□□□□ -0.29
SHMT2-224ENST00000556737 LARGE2Q8N3Y3 721 aa13.23□□□□□ -0.29
SHMT2-224ENST00000556737 SEC31BQ9NQW1 1179 aa13.23□□□□□ -0.29
SHMT2-224ENST00000556737 A0A1B0GUL6 1792 aa13.22□□□□□ -0.29
SHMT2-224ENST00000556737 PPIP5K2O43314 1243 aa13.22□□□□□ -0.29
SHMT2-224ENST00000556737 CTSWP56202 376 aa13.22□□□□□ -0.29
SHMT2-224ENST00000556737 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-224ENST00000556737 GPC2Q8N158 579 aa13.22□□□□□ -0.29
SHMT2-224ENST00000556737 MPNDQ8N594 471 aa13.22□□□□□ -0.29
SHMT2-224ENST00000556737 DNAAF4Q8WXU2 420 aa13.22□□□□□ -0.29
SHMT2-224ENST00000556737 JDP2Q8WYK2 163 aa13.22□□□□□ -0.29
SHMT2-224ENST00000556737 VPS33BQ9H267 617 aa13.22□□□□□ -0.29
SHMT2-224ENST00000556737 TAF1DQ9H5J8 278 aaPredicted RBP13.22□□□□□ -0.29
SHMT2-224ENST00000556737 RTL9Q8NET4 1388 aa13.21□□□□□ -0.29
SHMT2-224ENST00000556737 IQCA1LA6NCM1 817 aa13.21□□□□□ -0.29
SHMT2-224ENST00000556737 APLP1P51693 650 aa13.21□□□□□ -0.29
SHMT2-224ENST00000556737 CASP7P55210 303 aa13.21□□□□□ -0.29
SHMT2-224ENST00000556737 KIAA2012Q0VF49 1180 aa13.21□□□□□ -0.29
SHMT2-224ENST00000556737 NEXNQ0ZGT2 675 aa13.21□□□□□ -0.29
SHMT2-224ENST00000556737 SUPT20HQ8NEM7 779 aa13.21□□□□□ -0.29
SHMT2-224ENST00000556737 ZNF646O15015 1829 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-224ENST00000556737 PSME4Q14997 1843 aa13.2□□□□□ -0.3
SHMT2-224ENST00000556737 H7C1W4 665 aa13.2□□□□□ -0.3
SHMT2-224ENST00000556737 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
SHMT2-224ENST00000556737 GPSM2P81274 684 aa13.2□□□□□ -0.3
SHMT2-224ENST00000556737 GCKRQ14397 625 aa13.2□□□□□ -0.3
SHMT2-224ENST00000556737 CCDC152Q4G0S7 254 aa13.2□□□□□ -0.3
SHMT2-224ENST00000556737 NIM1KQ8IY84 436 aa13.2□□□□□ -0.3
SHMT2-224ENST00000556737 LINS1Q8NG48 757 aa13.2□□□□□ -0.3
SHMT2-224ENST00000556737 CCDC85AQ96PX6 553 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-224ENST00000556737 TMX4Q9H1E5 349 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-224ENST00000556737 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
SHMT2-224ENST00000556737 E9PSI1 815 aa13.19□□□□□ -0.3
SHMT2-224ENST00000556737 F6X3S4 739 aa13.19□□□□□ -0.3
SHMT2-224ENST00000556737 SCNN1DP51172 638 aa13.19□□□□□ -0.3
SHMT2-224ENST00000556737 EIF6P56537 245 aaKnown RBP13.19□□□□□ -0.3
SHMT2-224ENST00000556737 RPS8P62241 208 aaKnown RBP13.19□□□□□ -0.3
SHMT2-224ENST00000556737 HTRA3P83110 453 aa13.19□□□□□ -0.3
SHMT2-224ENST00000556737 SLFN5Q08AF3 891 aa13.19□□□□□ -0.3
SHMT2-224ENST00000556737 UBE3BQ7Z3V4 1068 aa13.19□□□□□ -0.3
SHMT2-224ENST00000556737 TTLL11Q8NHH1 800 aa13.19□□□□□ -0.3
SHMT2-224ENST00000556737 POLLQ9UGP5 575 aa13.19□□□□□ -0.3
SHMT2-224ENST00000556737 HACL1Q9UJ83 578 aa13.19□□□□□ -0.3
SHMT2-224ENST00000556737 YDJCA8MPS7 323 aa13.18□□□□□ -0.3
SHMT2-224ENST00000556737 EPHX2P34913 555 aa13.18□□□□□ -0.3
SHMT2-224ENST00000556737 BEND3Q5T5X7 828 aa13.18□□□□□ -0.3
SHMT2-224ENST00000556737 CHADLQ6NUI6 762 aa13.18□□□□□ -0.3
SHMT2-224ENST00000556737 PLA2G12BQ9BX93 195 aa13.18□□□□□ -0.3
SHMT2-224ENST00000556737 GREM2Q9H772 168 aa13.18□□□□□ -0.3
SHMT2-224ENST00000556737 PODXL2Q9NZ53 605 aa13.18□□□□□ -0.3
SHMT2-224ENST00000556737 ZNRF3Q9ULT6 936 aa13.18□□□□□ -0.3
SHMT2-224ENST00000556737 CXCL9Q07325 125 aa13.17□□□□□ -0.3
SHMT2-224ENST00000556737 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
SHMT2-224ENST00000556737 TRMT2AQ8IZ69 625 aaKnown RBP13.17□□□□□ -0.3
SHMT2-224ENST00000556737 DNAJC5GQ8N7S2 189 aa13.17□□□□□ -0.3
SHMT2-224ENST00000556737 TBC1D16Q8TBP0 767 aa13.17□□□□□ -0.3
SHMT2-224ENST00000556737 CDCA7LQ96GN5 454 aa13.17□□□□□ -0.3
SHMT2-224ENST00000556737 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
SHMT2-224ENST00000556737 NSFL1CQ9UNZ2 370 aaKnown RBP13.17□□□□□ -0.3
SHMT2-224ENST00000556737 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
SHMT2-224ENST00000556737 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
SHMT2-224ENST00000556737 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
SHMT2-224ENST00000556737 PASKQ96RG2 1323 aa13.15□□□□□ -0.3
SHMT2-224ENST00000556737 EPS15P42566 896 aa13.15□□□□□ -0.3
SHMT2-224ENST00000556737 WASHC4Q2M389 1173 aa13.15□□□□□ -0.3
SHMT2-224ENST00000556737 FAM161AQ3B820 660 aa13.15□□□□□ -0.3
SHMT2-224ENST00000556737 EAPPQ56P03 285 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-224ENST00000556737 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
SHMT2-224ENST00000556737 RAD17O75943 681 aa13.14□□□□□ -0.31
SHMT2-224ENST00000556737 UFL1O94874 794 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms