RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CCDC85AQ96PX6 553 aaPredicted RBP13.26□□□□□ -0.29
SNX6-208ENST00000556712 WDR90Q96KV7 1748 aa13.25□□□□□ -0.29
SNX6-208ENST00000556712 ZC3H4Q9UPT8 1303 aaKnown RBP13.25□□□□□ -0.29
SNX6-208ENST00000556712 C1QTNF8P60827 252 aa13.25□□□□□ -0.29
SNX6-208ENST00000556712 RTKN2Q8IZC4 609 aa13.25□□□□□ -0.29
SNX6-208ENST00000556712 CELF1Q92879 486 aaKnown RBP13.25□□□□□ -0.29
SNX6-208ENST00000556712 BCL2L13Q9BXK5 485 aa13.25□□□□□ -0.29
SNX6-208ENST00000556712 KDM2BQ8NHM5 1336 aa13.24□□□□□ -0.29
SNX6-208ENST00000556712 IARSP41252 1262 aaKnown RBP13.24□□□□□ -0.29
SNX6-208ENST00000556712 SF3B3Q15393 1217 aaKnown RBP13.24□□□□□ -0.29
SNX6-208ENST00000556712 UBE3BQ7Z3V4 1068 aa13.24□□□□□ -0.29
SNX6-208ENST00000556712 SEC31BQ9NQW1 1179 aa13.24□□□□□ -0.29
SNX6-208ENST00000556712 ATP6V0A2Q9Y487 856 aa13.24□□□□□ -0.29
SNX6-208ENST00000556712 CDHR2Q9BYE9 1310 aa13.23□□□□□ -0.29
SNX6-208ENST00000556712 ZNF541Q9H0D2 1346 aa13.23□□□□□ -0.29
SNX6-208ENST00000556712 GLTPD2A6NH11 291 aa13.23□□□□□ -0.29
SNX6-208ENST00000556712 PDE8AO60658 829 aa13.23□□□□□ -0.29
SNX6-208ENST00000556712 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
SNX6-208ENST00000556712 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
SNX6-208ENST00000556712 SSH1Q8WYL5 1049 aa13.23□□□□□ -0.29
SNX6-208ENST00000556712 PSMD1Q99460 953 aa13.23□□□□□ -0.29
SNX6-208ENST00000556712 RRAGCQ9HB90 399 aa13.23□□□□□ -0.29
SNX6-208ENST00000556712 GCKRQ14397 625 aa13.22□□□□□ -0.29
SNX6-208ENST00000556712 TRMT2AQ8IZ69 625 aaKnown RBP13.22□□□□□ -0.29
SNX6-208ENST00000556712 LINS1Q8NG48 757 aa13.22□□□□□ -0.29
SNX6-208ENST00000556712 BBOX1O75936 387 aa13.21□□□□□ -0.29
SNX6-208ENST00000556712 DDNO94850 711 aaPredicted RBP13.21□□□□□ -0.29
SNX6-208ENST00000556712 CTSWP56202 376 aa13.21□□□□□ -0.29
SNX6-208ENST00000556712 HNRNPUQ00839 825 aaKnown RBP eCLIP13.21□□□□□ -0.29
SNX6-208ENST00000556712 CCDC152Q4G0S7 254 aa13.21□□□□□ -0.29
SNX6-208ENST00000556712 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
SNX6-208ENST00000556712 SLC4A10Q6U841 1118 aa13.21□□□□□ -0.29
SNX6-208ENST00000556712 SP8Q8IXZ3 490 aa13.21□□□□□ -0.29
SNX6-208ENST00000556712 H7C1W4 665 aa13.2□□□□□ -0.3
SNX6-208ENST00000556712 PPIP5K2O43314 1243 aa13.2□□□□□ -0.3
SNX6-208ENST00000556712 CASP7P55210 303 aa13.2□□□□□ -0.3
SNX6-208ENST00000556712 AOC3Q16853 763 aa13.2□□□□□ -0.3
SNX6-208ENST00000556712 DPP8Q6V1X1 898 aaPredicted RBP13.2□□□□□ -0.3
SNX6-208ENST00000556712 LARGE2Q8N3Y3 721 aa13.2□□□□□ -0.3
SNX6-208ENST00000556712 TMX4Q9H1E5 349 aaPredicted RBP13.2□□□□□ -0.3
SNX6-208ENST00000556712 GREM2Q9H772 168 aa13.2□□□□□ -0.3
SNX6-208ENST00000556712 A0A1B0GUL6 1792 aa13.2□□□□□ -0.3
SNX6-208ENST00000556712 SCN4AP35499 1836 aa13.19□□□□□ -0.3
SNX6-208ENST00000556712 POTECB2RU33 542 aa13.19□□□□□ -0.3
SNX6-208ENST00000556712 HSP90B1P14625 803 aaKnown RBP13.19□□□□□ -0.3
SNX6-208ENST00000556712 MPNDQ8N594 471 aa13.19□□□□□ -0.3
SNX6-208ENST00000556712 TTLL11Q8NHH1 800 aa13.19□□□□□ -0.3
SNX6-208ENST00000556712 GPR101Q96P66 508 aaPredicted RBP13.19□□□□□ -0.3
SNX6-208ENST00000556712 SMC4Q9NTJ3 1288 aa13.19□□□□□ -0.3
SNX6-208ENST00000556712 FZD9O00144 591 aa13.18□□□□□ -0.3
SNX6-208ENST00000556712 RPS8P62241 208 aaKnown RBP13.18□□□□□ -0.3
SNX6-208ENST00000556712 GPSM2P81274 684 aa13.18□□□□□ -0.3
SNX6-208ENST00000556712 FAM161AQ3B820 660 aa13.18□□□□□ -0.3
SNX6-208ENST00000556712 DPY19L2Q6NUT2 758 aa13.18□□□□□ -0.3
SNX6-208ENST00000556712 TMC4Q7Z404 712 aa13.18□□□□□ -0.3
SNX6-208ENST00000556712 C16orf71Q8IYS4 520 aaPredicted RBP13.18□□□□□ -0.3
SNX6-208ENST00000556712 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
SNX6-208ENST00000556712 TOMM70O94826 608 aa13.17□□□□□ -0.3
SNX6-208ENST00000556712 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
SNX6-208ENST00000556712 NIM1KQ8IY84 436 aa13.17□□□□□ -0.3
SNX6-208ENST00000556712 JDP2Q8WYK2 163 aa13.17□□□□□ -0.3
SNX6-208ENST00000556712 SRCIN1Q9C0H9 1055 aa13.17□□□□□ -0.3
SNX6-208ENST00000556712 NSFL1CQ9UNZ2 370 aaKnown RBP13.17□□□□□ -0.3
SNX6-208ENST00000556712 RTL9Q8NET4 1388 aa13.17□□□□□ -0.3
SNX6-208ENST00000556712 PTPRCP08575 1304 aa13.16□□□□□ -0.3
SNX6-208ENST00000556712 GRM8O00222 908 aa13.16□□□□□ -0.3
SNX6-208ENST00000556712 ALDH1L2Q3SY69 923 aa13.16□□□□□ -0.3
SNX6-208ENST00000556712 ANKRD18AQ8IVF6 992 aa13.16□□□□□ -0.3
SNX6-208ENST00000556712 SUPT20HQ8NEM7 779 aa13.16□□□□□ -0.3
SNX6-208ENST00000556712 PLA2G12BQ9BX93 195 aa13.16□□□□□ -0.3
SNX6-208ENST00000556712 GJA3Q9Y6H8 435 aa13.16□□□□□ -0.3
SNX6-208ENST00000556712 ALDH1L1O75891 902 aa13.15□□□□□ -0.3
SNX6-208ENST00000556712 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
SNX6-208ENST00000556712 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
SNX6-208ENST00000556712 VEGFAP15692 232 aaPredicted RBP13.15□□□□□ -0.3
SNX6-208ENST00000556712 ITGA6P23229 1130 aa13.15□□□□□ -0.3
SNX6-208ENST00000556712 KIAA2012Q0VF49 1180 aa13.15□□□□□ -0.3
SNX6-208ENST00000556712 EPHA10Q5JZY3 1008 aa13.15□□□□□ -0.3
SNX6-208ENST00000556712 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
SNX6-208ENST00000556712 POLLQ9UGP5 575 aa13.15□□□□□ -0.3
SNX6-208ENST00000556712 CHMP3Q9Y3E7 222 aa13.15□□□□□ -0.3
SNX6-208ENST00000556712 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.31
SNX6-208ENST00000556712 SCN9AQ15858 1988 aa13.14□□□□□ -0.31
SNX6-208ENST00000556712 C6orf229H3BNL8 230 aa13.14□□□□□ -0.31
SNX6-208ENST00000556712 RIMBP2O15034 1052 aa13.14□□□□□ -0.31
SNX6-208ENST00000556712 UFL1O94874 794 aa13.14□□□□□ -0.31
SNX6-208ENST00000556712 CT47B1P0C2W7 299 aaPredicted RBP13.14□□□□□ -0.31
SNX6-208ENST00000556712 EIF6P56537 245 aaKnown RBP13.14□□□□□ -0.31
SNX6-208ENST00000556712 FOXO4P98177 505 aa13.14□□□□□ -0.31
SNX6-208ENST00000556712 TBC1D16Q8TBP0 767 aa13.14□□□□□ -0.31
SNX6-208ENST00000556712 RBM46Q8TBY0 533 aaKnown RBP13.14□□□□□ -0.31
SNX6-208ENST00000556712 SUCLG2Q96I99 432 aa13.14□□□□□ -0.31
SNX6-208ENST00000556712 L3MBTL3Q96JM7 780 aaPredicted RBP13.14□□□□□ -0.31
SNX6-208ENST00000556712 C9orf78Q9NZ63 289 aaPredicted RBP13.14□□□□□ -0.31
SNX6-208ENST00000556712 CSF1RP07333 972 aa13.13□□□□□ -0.31
SNX6-208ENST00000556712 NBPF7P0C2Y1 421 aaPredicted RBP13.13□□□□□ -0.31
SNX6-208ENST00000556712 RARSP54136 660 aaKnown RBP13.13□□□□□ -0.31
SNX6-208ENST00000556712 GPC2Q8N158 579 aa13.13□□□□□ -0.31
SNX6-208ENST00000556712 DBNDD1Q9H9R9 158 aa13.13□□□□□ -0.31
SNX6-208ENST00000556712 ANKIB1Q9P2G1 1089 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms