RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 RAB3GAP2Q9H2M9 1393 aa5.96□□□□□ -1.45
ATXN3-242ENST00000556644 UBE2Q2LH0YL09 131 aa5.96□□□□□ -1.46
ATXN3-242ENST00000556644 H7C1D1 291 aa5.96□□□□□ -1.46
ATXN3-242ENST00000556644 ZBTB7BO15156 539 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-242ENST00000556644 CAMTA2O94983 1202 aa5.96□□□□□ -1.46
ATXN3-242ENST00000556644 C1orf141Q5JVX7 400 aa5.96□□□□□ -1.46
ATXN3-242ENST00000556644 DCPSQ96C86 337 aaKnown RBP5.96□□□□□ -1.46
ATXN3-242ENST00000556644 SHISA4Q96DD7 197 aa5.96□□□□□ -1.46
ATXN3-242ENST00000556644 GGA3Q9NZ52 723 aa5.96□□□□□ -1.46
ATXN3-242ENST00000556644 SCAF8Q9UPN6 1271 aaKnown RBP5.96□□□□□ -1.46
ATXN3-242ENST00000556644 RPTORQ8N122 1335 aa5.96□□□□□ -1.46
ATXN3-242ENST00000556644 POLR2AP24928 1970 aaKnown RBP5.95□□□□□ -1.46
ATXN3-242ENST00000556644 A0A1W2PPC1 479 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 ALDH1B1P30837 517 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 TM4SF4P48230 202 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 SLC9C1Q4G0N8 1177 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 PLEKHO1Q53GL0 409 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-242ENST00000556644 NUTM1Q86Y26 1132 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 SULF1Q8IWU6 871 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 SH3TC2Q8TF17 1288 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 FAM161BQ96MY7 647 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 EFCC1Q9HA90 598 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 NR2E3Q9Y5X4 410 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 PTCH2Q9Y6C5 1203 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 WASHC2AQ641Q2 1341 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 CDHR2Q9BYE9 1310 aa5.95□□□□□ -1.46
ATXN3-242ENST00000556644 KIF24Q5T7B8 1368 aa5.94□□□□□ -1.46
ATXN3-242ENST00000556644 ABCC12Q96J65 1359 aa5.94□□□□□ -1.46
ATXN3-242ENST00000556644 PRAMEF22A3QJZ6 481 aa5.94□□□□□ -1.46
ATXN3-242ENST00000556644 KLRG2A4D1S0 409 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-242ENST00000556644 TNNT2P45379 298 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-242ENST00000556644 PIP4K2AP48426 406 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-242ENST00000556644 SREBF2Q12772 1141 aa5.94□□□□□ -1.46
ATXN3-242ENST00000556644 MAP3K12Q12852 859 aa5.94□□□□□ -1.46
ATXN3-242ENST00000556644 TTLL12Q14166 644 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-242ENST00000556644 PRAMEF18Q5VWM3 479 aa5.94□□□□□ -1.46
ATXN3-242ENST00000556644 ERO1AQ96HE7 468 aa5.94□□□□□ -1.46
ATXN3-242ENST00000556644 GUCD1Q96NT3 240 aa5.94□□□□□ -1.46
ATXN3-242ENST00000556644 IRS2Q9Y4H2 1338 aa5.94□□□□□ -1.46
ATXN3-242ENST00000556644 YDJCA8MPS7 323 aa5.93□□□□□ -1.46
ATXN3-242ENST00000556644 PPEF1O14829 653 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-242ENST00000556644 BCAMP50895 628 aa5.93□□□□□ -1.46
ATXN3-242ENST00000556644 EIF4A2Q14240 407 aaKnown RBP5.93□□□□□ -1.46
ATXN3-242ENST00000556644 TNIP1Q15025 636 aa5.93□□□□□ -1.46
ATXN3-242ENST00000556644 CC2D2BQ6DHV5 1058 aa5.93□□□□□ -1.46
ATXN3-242ENST00000556644 DZIP3Q86Y13 1208 aaKnown RBP5.93□□□□□ -1.46
ATXN3-242ENST00000556644 AEBP1Q8IUX7 1158 aa5.93□□□□□ -1.46
ATXN3-242ENST00000556644 CFHR5Q9BXR6 569 aa5.93□□□□□ -1.46
ATXN3-242ENST00000556644 TNFRSF10AO00220 468 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 STARD3NLO95772 234 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 A1BGP04217 495 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 GTF2E1P29083 439 aaPredicted RBP5.92□□□□□ -1.46
ATXN3-242ENST00000556644 PRKG1Q13976 671 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 MTFR1Q15390 333 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 KIF4BQ2VIQ3 1234 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 GPR153Q6NV75 609 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 NPM2Q86SE8 214 aaKnown RBP5.92□□□□□ -1.46
ATXN3-242ENST00000556644 RPGRQ92834 1020 aaKnown RBP5.92□□□□□ -1.46
ATXN3-242ENST00000556644 HTATIP2Q9BUP3 242 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 SLC52A2Q9HAB3 445 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 LGR6Q9HBX8 967 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 NIP7Q9Y221 180 aaKnown RBP eCLIP5.92□□□□□ -1.46
ATXN3-242ENST00000556644 KIF20BQ96Q89 1820 aa5.92□□□□□ -1.46
ATXN3-242ENST00000556644 IGF2BP3O00425 579 aaKnown RBP eCLIP5.91□□□□□ -1.46
ATXN3-242ENST00000556644 PSMD14O00487 310 aa5.91□□□□□ -1.46
ATXN3-242ENST00000556644 EVI5O60447 810 aa5.91□□□□□ -1.46
ATXN3-242ENST00000556644 CRHR2Q13324 411 aa5.91□□□□□ -1.46
ATXN3-242ENST00000556644 ANGEL2Q5VTE6 544 aaKnown RBP5.91□□□□□ -1.46
ATXN3-242ENST00000556644 TPTE2Q6XPS3 522 aa5.91□□□□□ -1.46
ATXN3-242ENST00000556644 NBPF11Q86T75 865 aa5.91□□□□□ -1.46
ATXN3-242ENST00000556644 MAFAQ8NHW3 353 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-242ENST00000556644 L3MBTL2Q969R5 705 aa5.91□□□□□ -1.46
ATXN3-242ENST00000556644 ZMYND8Q9ULU4 1186 aaPredicted RBP5.91□□□□□ -1.46
ATXN3-242ENST00000556644 IL6STP40189 918 aaPredicted RBP5.9□□□□□ -1.46
ATXN3-242ENST00000556644 FXR2P51116 673 aaKnown RBP eCLIP5.9□□□□□ -1.46
ATXN3-242ENST00000556644 FKBP1BP68106 108 aa5.9□□□□□ -1.46
ATXN3-242ENST00000556644 SP3Q02447 781 aa5.9□□□□□ -1.46
ATXN3-242ENST00000556644 PTPN12Q05209 780 aaKnown RBP5.9□□□□□ -1.46
ATXN3-242ENST00000556644 CRY2Q49AN0 593 aa5.9□□□□□ -1.46
ATXN3-242ENST00000556644 AMOTQ4VCS5 1084 aa5.9□□□□□ -1.46
ATXN3-242ENST00000556644 C3orf67Q6ZVT6 689 aa5.9□□□□□ -1.46
ATXN3-242ENST00000556644 ALYREFQ86V81 257 aaKnown RBP5.9□□□□□ -1.46
ATXN3-242ENST00000556644 IFNL1Q8IU54 200 aa5.9□□□□□ -1.46
ATXN3-242ENST00000556644 FZD1Q9UP38 647 aa5.9□□□□□ -1.46
ATXN3-242ENST00000556644 PIEZO1Q92508 2521 aa5.9□□□□□ -1.47
ATXN3-242ENST00000556644 KDM3BQ7LBC6 1761 aa5.9□□□□□ -1.47
ATXN3-242ENST00000556644 RIC1Q4ADV7 1423 aa5.9□□□□□ -1.47
ATXN3-242ENST00000556644 FARP2O94887 1054 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-242ENST00000556644 ALDH1A1P00352 501 aa5.89□□□□□ -1.47
ATXN3-242ENST00000556644 ZEB1P37275 1124 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-242ENST00000556644 KIAA2012Q0VF49 1180 aa5.89□□□□□ -1.47
ATXN3-242ENST00000556644 TCIRG1Q13488 830 aa5.89□□□□□ -1.47
ATXN3-242ENST00000556644 SCARF1Q14162 830 aa5.89□□□□□ -1.47
ATXN3-242ENST00000556644 SPRYD7Q5W111 196 aa5.89□□□□□ -1.47
ATXN3-242ENST00000556644 DPP8Q6V1X1 898 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-242ENST00000556644 UBE2Q1Q7Z7E8 422 aa5.89□□□□□ -1.47
ATXN3-242ENST00000556644 VSIG10Q8N0Z9 540 aa5.89□□□□□ -1.47
ATXN3-242ENST00000556644 SYMPKQ92797 1274 aaKnown RBP5.89□□□□□ -1.47
ATXN3-242ENST00000556644 ZNF496Q96IT1 587 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-242ENST00000556644 GDF15Q99988 308 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms