RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 DICER1Q9UPY3 1922 aaKnown RBP10.39□□□□□ -0.75
VTI1B-206ENST00000556461 F6X3S4 739 aa10.39□□□□□ -0.75
VTI1B-206ENST00000556461 BBOX1O75936 387 aa10.39□□□□□ -0.75
VTI1B-206ENST00000556461 TOMM70O94826 608 aa10.39□□□□□ -0.75
VTI1B-206ENST00000556461 FKBP5Q13451 457 aaPredicted RBP10.39□□□□□ -0.75
VTI1B-206ENST00000556461 CCDC85AQ96PX6 553 aaPredicted RBP10.39□□□□□ -0.75
VTI1B-206ENST00000556461 SEC31BQ9NQW1 1179 aa10.39□□□□□ -0.75
VTI1B-206ENST00000556461 FZD9O00144 591 aa10.38□□□□□ -0.75
VTI1B-206ENST00000556461 SLFN5Q08AF3 891 aa10.38□□□□□ -0.75
VTI1B-206ENST00000556461 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
VTI1B-206ENST00000556461 SP8Q8IXZ3 490 aa10.38□□□□□ -0.75
VTI1B-206ENST00000556461 DNAAF4Q8WXU2 420 aa10.38□□□□□ -0.75
VTI1B-206ENST00000556461 E9PSI1 815 aa10.37□□□□□ -0.75
VTI1B-206ENST00000556461 H7C1W4 665 aa10.37□□□□□ -0.75
VTI1B-206ENST00000556461 PDE8AO60658 829 aa10.37□□□□□ -0.75
VTI1B-206ENST00000556461 VEGFAP15692 232 aaPredicted RBP10.37□□□□□ -0.75
VTI1B-206ENST00000556461 CASP7P55210 303 aa10.37□□□□□ -0.75
VTI1B-206ENST00000556461 NEXNQ0ZGT2 675 aa10.37□□□□□ -0.75
VTI1B-206ENST00000556461 GCKRQ14397 625 aa10.37□□□□□ -0.75
VTI1B-206ENST00000556461 AOC3Q16853 763 aa10.37□□□□□ -0.75
VTI1B-206ENST00000556461 DPY19L2Q6NUT2 758 aa10.37□□□□□ -0.75
VTI1B-206ENST00000556461 RBM46Q8TBY0 533 aaKnown RBP10.37□□□□□ -0.75
VTI1B-206ENST00000556461 RTFDC1Q9BY42 306 aaPredicted RBP10.37□□□□□ -0.75
VTI1B-206ENST00000556461 CDHR2Q9BYE9 1310 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 WDR90Q96KV7 1748 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 DUOX1Q9NRD9 1551 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 PPIP5K2O43314 1243 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 HSPA6P17066 643 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 GPSM2P81274 684 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 DPP8Q6V1X1 898 aaPredicted RBP10.36□□□□□ -0.75
VTI1B-206ENST00000556461 UBE3BQ7Z3V4 1068 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 C16orf71Q8IYS4 520 aaPredicted RBP10.36□□□□□ -0.75
VTI1B-206ENST00000556461 TRMT2AQ8IZ69 625 aaKnown RBP10.36□□□□□ -0.75
VTI1B-206ENST00000556461 LARGE2Q8N3Y3 721 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 MPNDQ8N594 471 aa10.36□□□□□ -0.75
VTI1B-206ENST00000556461 MRPL50Q8N5N7 158 aaKnown RBP10.36□□□□□ -0.75
VTI1B-206ENST00000556461 GPR101Q96P66 508 aaPredicted RBP10.36□□□□□ -0.75
VTI1B-206ENST00000556461 CTSWP56202 376 aa10.35□□□□□ -0.75
VTI1B-206ENST00000556461 RPS8P62241 208 aaKnown RBP10.35□□□□□ -0.75
VTI1B-206ENST00000556461 CCDC152Q4G0S7 254 aa10.35□□□□□ -0.75
VTI1B-206ENST00000556461 BEND3Q5T5X7 828 aa10.35□□□□□ -0.75
VTI1B-206ENST00000556461 LINS1Q8NG48 757 aa10.35□□□□□ -0.75
VTI1B-206ENST00000556461 TTLL11Q8NHH1 800 aa10.35□□□□□ -0.75
VTI1B-206ENST00000556461 L3MBTL3Q96JM7 780 aaPredicted RBP10.35□□□□□ -0.75
VTI1B-206ENST00000556461 GREM2Q9H772 168 aa10.35□□□□□ -0.75
VTI1B-206ENST00000556461 POLLQ9UGP5 575 aa10.35□□□□□ -0.75
VTI1B-206ENST00000556461 LRRC37AA6NMS7 1700 aa10.34□□□□□ -0.75
VTI1B-206ENST00000556461 WTIPA6NIX2 430 aaPredicted RBP10.34□□□□□ -0.75
VTI1B-206ENST00000556461 TMC4Q7Z404 712 aa10.34□□□□□ -0.75
VTI1B-206ENST00000556461 JDP2Q8WYK2 163 aa10.34□□□□□ -0.75
VTI1B-206ENST00000556461 SSH1Q8WYL5 1049 aa10.34□□□□□ -0.75
VTI1B-206ENST00000556461 BCL2L13Q9BXK5 485 aa10.34□□□□□ -0.75
VTI1B-206ENST00000556461 TMX4Q9H1E5 349 aaPredicted RBP10.34□□□□□ -0.75
VTI1B-206ENST00000556461 NSFL1CQ9UNZ2 370 aaKnown RBP10.34□□□□□ -0.75
VTI1B-206ENST00000556461 GJA3Q9Y6H8 435 aa10.34□□□□□ -0.75
VTI1B-206ENST00000556461 YDJCA8MPS7 323 aa10.33□□□□□ -0.76
VTI1B-206ENST00000556461 EIF6P56537 245 aaKnown RBP10.33□□□□□ -0.76
VTI1B-206ENST00000556461 HTRA3P83110 453 aa10.33□□□□□ -0.76
VTI1B-206ENST00000556461 KIAA2012Q0VF49 1180 aa10.33□□□□□ -0.76
VTI1B-206ENST00000556461 FSTL1Q12841 308 aa10.33□□□□□ -0.76
VTI1B-206ENST00000556461 EPHA10Q5JZY3 1008 aa10.33□□□□□ -0.76
VTI1B-206ENST00000556461 NIM1KQ8IY84 436 aa10.33□□□□□ -0.76
VTI1B-206ENST00000556461 SUPT20HQ8NEM7 779 aa10.33□□□□□ -0.76
VTI1B-206ENST00000556461 TAF1DQ9H5J8 278 aaPredicted RBP10.33□□□□□ -0.76
VTI1B-206ENST00000556461 C6orf229H3BNL8 230 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 RIMBP2O15034 1052 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 HSP90B1P14625 803 aaKnown RBP10.32□□□□□ -0.76
VTI1B-206ENST00000556461 SCNN1DP51172 638 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 CXCL9Q07325 125 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 FAM161AQ3B820 660 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 SLC4A10Q6U841 1118 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 GPC2Q8N158 579 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 SMC1BQ8NDV3 1235 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 TBC1D16Q8TBP0 767 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 PLA2G12BQ9BX93 195 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 VPS33BQ9H267 617 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 LTBP1Q14766 1721 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 CACNA1FO60840 1977 aa10.32□□□□□ -0.76
VTI1B-206ENST00000556461 RTL9Q8NET4 1388 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 RAD17O75943 681 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 CSF1RP07333 972 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 EPS15P42566 896 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 FOXO4P98177 505 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 ANKRD18AQ8IVF6 992 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 DBNDD1Q9H9R9 158 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 KCNQ5Q9NR82 932 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 PODXL2Q9NZ53 605 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 HACL1Q9UJ83 578 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 ZNRF3Q9ULT6 936 aa10.31□□□□□ -0.76
VTI1B-206ENST00000556461 SHTN1A0MZ66 631 aa10.3□□□□□ -0.76
VTI1B-206ENST00000556461 IQCA1LA6NCM1 817 aa10.3□□□□□ -0.76
VTI1B-206ENST00000556461 UFL1O94874 794 aa10.3□□□□□ -0.76
VTI1B-206ENST00000556461 ITGA6P23229 1130 aa10.3□□□□□ -0.76
VTI1B-206ENST00000556461 EPHX2P34913 555 aa10.3□□□□□ -0.76
VTI1B-206ENST00000556461 WASHC4Q2M389 1173 aa10.3□□□□□ -0.76
VTI1B-206ENST00000556461 EAPPQ56P03 285 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms