RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ADCY9O60503 1353 aa12.38□□□□□ -0.43
SRP54-210ENST00000556380 PI4KAP2A4QPH2 592 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 H0YIN7 160 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 ST5P78524 1137 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 FLIIQ13045 1269 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 PPP1R42Q7Z4L9 355 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 RIC3Q7Z5B4 369 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 C2CD5Q86YS7 1000 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 PI4KAP1Q8N8J0 262 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 METTL22Q9BUU2 404 aaPredicted RBP12.37□□□□□ -0.43
SRP54-210ENST00000556380 UTP14AQ9BVJ6 771 aaKnown RBP12.37□□□□□ -0.43
SRP54-210ENST00000556380 PIM2Q9P1W9 311 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 ABCC12Q96J65 1359 aa12.37□□□□□ -0.43
SRP54-210ENST00000556380 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
SRP54-210ENST00000556380 GRIN3BO60391 1043 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 DDX58O95786 925 aaKnown RBP12.36□□□□□ -0.43
SRP54-210ENST00000556380 IGKV5-2P06315 115 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 SRGNP10124 158 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 SYNE4Q8N205 404 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 MRPL50Q8N5N7 158 aaKnown RBP12.36□□□□□ -0.43
SRP54-210ENST00000556380 SSH1Q8WYL5 1049 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 ZFP91Q96JP5 570 aaPredicted RBP12.36□□□□□ -0.43
SRP54-210ENST00000556380 WWC3Q9ULE0 1092 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 MAP3K2Q9Y2U5 619 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 ANKRD31Q8N7Z5 1873 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 RNF123Q5XPI4 1314 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 ZBED9Q6R2W3 1325 aa12.36□□□□□ -0.43
SRP54-210ENST00000556380 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
SRP54-210ENST00000556380 CRY2Q49AN0 593 aa12.35□□□□□ -0.43
SRP54-210ENST00000556380 DALRD3Q5D0E6 543 aaKnown RBP12.35□□□□□ -0.43
SRP54-210ENST00000556380 PCDH10Q9P2E7 1040 aa12.35□□□□□ -0.43
SRP54-210ENST00000556380 N4BP2Q86UW6 1770 aaPredicted RBP12.35□□□□□ -0.43
SRP54-210ENST00000556380 RIC1Q4ADV7 1423 aa12.35□□□□□ -0.43
SRP54-210ENST00000556380 NPHP1O15259 732 aa12.34□□□□□ -0.43
SRP54-210ENST00000556380 GTF2E1P29083 439 aaPredicted RBP12.34□□□□□ -0.43
SRP54-210ENST00000556380 HOXA10P31260 410 aaPredicted RBP12.34□□□□□ -0.43
SRP54-210ENST00000556380 STYK1Q6J9G0 422 aa12.34□□□□□ -0.43
SRP54-210ENST00000556380 TTLL6Q8N841 843 aa12.34□□□□□ -0.43
SRP54-210ENST00000556380 CCDC191Q8NCU4 936 aa12.34□□□□□ -0.43
SRP54-210ENST00000556380 MASTLQ96GX5 879 aa12.34□□□□□ -0.43
SRP54-210ENST00000556380 MYD88Q99836 296 aa12.34□□□□□ -0.43
SRP54-210ENST00000556380 TRMT112Q9UI30 125 aaKnown RBP12.34□□□□□ -0.43
SRP54-210ENST00000556380 BCS1LQ9Y276 419 aa12.34□□□□□ -0.43
SRP54-210ENST00000556380 SNPHO15079 494 aa12.33□□□□□ -0.44
SRP54-210ENST00000556380 BRPF1P55201 1214 aaPredicted RBP12.33□□□□□ -0.44
SRP54-210ENST00000556380 FKBP5Q13451 457 aaPredicted RBP12.33□□□□□ -0.44
SRP54-210ENST00000556380 ALDH1L2Q3SY69 923 aa12.33□□□□□ -0.44
SRP54-210ENST00000556380 C7orf43Q8WVR3 580 aa12.33□□□□□ -0.44
SRP54-210ENST00000556380 DNAAF4Q8WXU2 420 aa12.33□□□□□ -0.44
SRP54-210ENST00000556380 BOLA1Q9Y3E2 137 aa12.33□□□□□ -0.44
SRP54-210ENST00000556380 SH3TC1Q8TE82 1336 aa12.33□□□□□ -0.44
SRP54-210ENST00000556380 BRCA1P38398 1863 aaKnown RBP12.32□□□□□ -0.44
SRP54-210ENST00000556380 G3V3G9 751 aa12.32□□□□□ -0.44
SRP54-210ENST00000556380 HCLS1P14317 486 aaPredicted RBP12.32□□□□□ -0.44
SRP54-210ENST00000556380 NPR1P16066 1061 aa12.32□□□□□ -0.44
SRP54-210ENST00000556380 ZBTB38Q8NAP3 1195 aaPredicted RBP12.32□□□□□ -0.44
SRP54-210ENST00000556380 CNKSR1Q969H4 720 aa12.32□□□□□ -0.44
SRP54-210ENST00000556380 ZNF622Q969S3 477 aaKnown RBP eCLIP12.32□□□□□ -0.444e-7■□□□□ 9.4
SRP54-210ENST00000556380 FAM89AQ96GI7 184 aa12.32□□□□□ -0.44
SRP54-210ENST00000556380 CWC25Q9NXE8 425 aaPredicted RBP12.32□□□□□ -0.44
SRP54-210ENST00000556380 CACNA1FO60840 1977 aa12.32□□□□□ -0.44
SRP54-210ENST00000556380 ANKRD36CQ5JPF3 1778 aa12.31□□□□□ -0.44
SRP54-210ENST00000556380 ARFGEF2Q9Y6D5 1785 aa12.31□□□□□ -0.44
SRP54-210ENST00000556380 NEURL1BA8MQ27 555 aa12.31□□□□□ -0.44
SRP54-210ENST00000556380 F6X3S4 739 aa12.31□□□□□ -0.44
SRP54-210ENST00000556380 PCCAP05165 728 aaPredicted RBP12.31□□□□□ -0.44
SRP54-210ENST00000556380 RARSP54136 660 aaKnown RBP12.31□□□□□ -0.44
SRP54-210ENST00000556380 BEND3Q5T5X7 828 aa12.31□□□□□ -0.44
SRP54-210ENST00000556380 NLRP3Q96P20 1036 aa12.31□□□□□ -0.44
SRP54-210ENST00000556380 H7C1W4 665 aa12.3□□□□□ -0.44
SRP54-210ENST00000556380 NEXNQ0ZGT2 675 aa12.3□□□□□ -0.44
SRP54-210ENST00000556380 GCKRQ14397 625 aa12.3□□□□□ -0.44
SRP54-210ENST00000556380 CWF19L2Q2TBE0 894 aaKnown RBP12.3□□□□□ -0.44
SRP54-210ENST00000556380 LINS1Q8NG48 757 aa12.3□□□□□ -0.44
SRP54-210ENST00000556380 CRAMP1Q96RY5 1269 aa12.3□□□□□ -0.44
SRP54-210ENST00000556380 COL11A2P13942 1736 aaPredicted RBP12.3□□□□□ -0.44
SRP54-210ENST00000556380 TNRC6CQ9HCJ0 1690 aaKnown RBP12.29□□□□□ -0.44
SRP54-210ENST00000556380 DLEC1Q9Y238 1755 aa12.29□□□□□ -0.44
SRP54-210ENST00000556380 IRS4O14654 1257 aaPredicted RBP12.29□□□□□ -0.44
SRP54-210ENST00000556380 CASP7P55210 303 aa12.29□□□□□ -0.44
SRP54-210ENST00000556380 SF3B3Q15393 1217 aaKnown RBP12.29□□□□□ -0.44
SRP54-210ENST00000556380 PRPF40BQ6NWY9 871 aaKnown RBP12.29□□□□□ -0.44
SRP54-210ENST00000556380 JARID2Q92833 1246 aaPredicted RBP12.29□□□□□ -0.44
SRP54-210ENST00000556380 BCL2L13Q9BXK5 485 aa12.29□□□□□ -0.44
SRP54-210ENST00000556380 PTPRCP08575 1304 aa12.29□□□□□ -0.44
SRP54-210ENST00000556380 ECM2O94769 699 aaPredicted RBP12.28□□□□□ -0.44
SRP54-210ENST00000556380 ALDH1B1P30837 517 aa12.28□□□□□ -0.44
SRP54-210ENST00000556380 RTL5Q5HYW3 569 aaPredicted RBP12.28□□□□□ -0.44
SRP54-210ENST00000556380 ARHGAP27Q6ZUM4 889 aa12.28□□□□□ -0.44
SRP54-210ENST00000556380 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
SRP54-210ENST00000556380 CDHR2Q9BYE9 1310 aa12.28□□□□□ -0.44
SRP54-210ENST00000556380 C21orf2O43822 256 aa12.27□□□□□ -0.45
SRP54-210ENST00000556380 PRELPP51888 382 aa12.27□□□□□ -0.45
SRP54-210ENST00000556380 RPGRQ92834 1020 aaKnown RBP12.27□□□□□ -0.45
SRP54-210ENST00000556380 RBM17Q96I25 401 aaKnown RBP12.27□□□□□ -0.45
SRP54-210ENST00000556380 SLX4Q8IY92 1834 aa12.27□□□□□ -0.45
SRP54-210ENST00000556380 ARFGEF1Q9Y6D6 1849 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms