RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ZNF277Q9NRM2 450 aaPredicted RBP19.32■□□□□ 0.68
ACTN1-217ENST00000556203 SNED1Q8TER0 1413 aa19.32■□□□□ 0.68
ACTN1-217ENST00000556203 ZC3H4Q9UPT8 1303 aaKnown RBP19.31■□□□□ 0.68
ACTN1-217ENST00000556203 GRIPAP1Q4V328 841 aa19.31■□□□□ 0.68
ACTN1-217ENST00000556203 SLC4A10Q6U841 1118 aa19.31■□□□□ 0.68
ACTN1-217ENST00000556203 CELF1Q92879 486 aaKnown RBP19.31■□□□□ 0.68
ACTN1-217ENST00000556203 CCDC85AQ96PX6 553 aaPredicted RBP19.31■□□□□ 0.68
ACTN1-217ENST00000556203 SMC4Q9NTJ3 1288 aa19.31■□□□□ 0.68
ACTN1-217ENST00000556203 FER1L6Q2WGJ9 1857 aa19.31■□□□□ 0.68
ACTN1-217ENST00000556203 CACNA1FO60840 1977 aa19.3■□□□□ 0.68
ACTN1-217ENST00000556203 LAMB2P55268 1798 aa19.3■□□□□ 0.68
ACTN1-217ENST00000556203 CCDC152Q4G0S7 254 aa19.3■□□□□ 0.68
ACTN1-217ENST00000556203 SP8Q8IXZ3 490 aa19.3■□□□□ 0.68
ACTN1-217ENST00000556203 PSMD1Q99460 953 aa19.3■□□□□ 0.68
ACTN1-217ENST00000556203 PTPRCP08575 1304 aa19.29■□□□□ 0.68
ACTN1-217ENST00000556203 CTSWP56202 376 aa19.29■□□□□ 0.68
ACTN1-217ENST00000556203 SEC31BQ9NQW1 1179 aa19.29■□□□□ 0.68
ACTN1-217ENST00000556203 SBF1O95248 1867 aa19.28■□□□□ 0.68
ACTN1-217ENST00000556203 IARSP41252 1262 aaKnown RBP19.28■□□□□ 0.68
ACTN1-217ENST00000556203 CASP7P55210 303 aa19.28■□□□□ 0.68
ACTN1-217ENST00000556203 TMC4Q7Z404 712 aa19.28■□□□□ 0.68
ACTN1-217ENST00000556203 KDM2BQ8NHM5 1336 aa19.27■□□□□ 0.68
ACTN1-217ENST00000556203 RPS8P62241 208 aaKnown RBP19.27■□□□□ 0.68
ACTN1-217ENST00000556203 SRCIN1Q9C0H9 1055 aa19.27■□□□□ 0.68
ACTN1-217ENST00000556203 ZBED9Q6R2W3 1325 aa19.26■□□□□ 0.67
ACTN1-217ENST00000556203 GLTPD2A6NH11 291 aa19.26■□□□□ 0.67
ACTN1-217ENST00000556203 ALDH1L1O75891 902 aa19.26■□□□□ 0.67
ACTN1-217ENST00000556203 DPP8Q6V1X1 898 aaPredicted RBP19.26■□□□□ 0.67
ACTN1-217ENST00000556203 MPNDQ8N594 471 aa19.26■□□□□ 0.67
ACTN1-217ENST00000556203 TTLL11Q8NHH1 800 aa19.26■□□□□ 0.67
ACTN1-217ENST00000556203 PLA2G12BQ9BX93 195 aa19.26■□□□□ 0.67
ACTN1-217ENST00000556203 NMRK2Q9NPI5 230 aa19.26■□□□□ 0.67
ACTN1-217ENST00000556203 RARSP54136 660 aaKnown RBP19.25■□□□□ 0.67
ACTN1-217ENST00000556203 GREM2Q9H772 168 aa19.25■□□□□ 0.67
ACTN1-217ENST00000556203 COL4A1P02462 1669 aa19.24■□□□□ 0.67
ACTN1-217ENST00000556203 GRM8O00222 908 aa19.24■□□□□ 0.67
ACTN1-217ENST00000556203 KIF3CO14782 793 aa19.24■□□□□ 0.67
ACTN1-217ENST00000556203 DPY19L2Q6NUT2 758 aa19.24■□□□□ 0.67
ACTN1-217ENST00000556203 RTFDC1Q9BY42 306 aaPredicted RBP19.24■□□□□ 0.67
ACTN1-217ENST00000556203 C9orf78Q9NZ63 289 aaPredicted RBP19.24■□□□□ 0.67
ACTN1-217ENST00000556203 NOB1Q9ULX3 412 aaKnown RBP19.24■□□□□ 0.67
ACTN1-217ENST00000556203 TIAM2Q8IVF5 1701 aa19.23■□□□□ 0.67
ACTN1-217ENST00000556203 BRPF1P55201 1214 aaPredicted RBP19.23■□□□□ 0.67
ACTN1-217ENST00000556203 ANKRD18AQ8IVF6 992 aa19.23■□□□□ 0.67
ACTN1-217ENST00000556203 LARGE2Q8N3Y3 721 aa19.23■□□□□ 0.67
ACTN1-217ENST00000556203 SUPT20HQ8NEM7 779 aa19.23■□□□□ 0.67
ACTN1-217ENST00000556203 CDC5LQ99459 802 aaKnown RBP19.23■□□□□ 0.67
ACTN1-217ENST00000556203 PPIP5K2O43314 1243 aa19.22■□□□□ 0.67
ACTN1-217ENST00000556203 JDP2Q8WYK2 163 aa19.22■□□□□ 0.67
ACTN1-217ENST00000556203 RRAGCQ9HB90 399 aa19.22■□□□□ 0.67
ACTN1-217ENST00000556203 NSFL1CQ9UNZ2 370 aaKnown RBP19.22■□□□□ 0.67
ACTN1-217ENST00000556203 RTL9Q8NET4 1388 aa19.21■□□□□ 0.67
ACTN1-217ENST00000556203 CSF1RP07333 972 aa19.21■□□□□ 0.67
ACTN1-217ENST00000556203 TAF1P21675 1872 aa19.21■□□□□ 0.67
ACTN1-217ENST00000556203 GPSM2P81274 684 aa19.21■□□□□ 0.67
ACTN1-217ENST00000556203 AOC3Q16853 763 aa19.21■□□□□ 0.67
ACTN1-217ENST00000556203 FAM161AQ3B820 660 aa19.21■□□□□ 0.67
ACTN1-217ENST00000556203 ZNF541Q9H0D2 1346 aa19.21■□□□□ 0.67
ACTN1-217ENST00000556203 FZD9O00144 591 aa19.2■□□□□ 0.66
ACTN1-217ENST00000556203 DDNO94850 711 aaPredicted RBP19.2■□□□□ 0.66
ACTN1-217ENST00000556203 ITGA6P23229 1130 aa19.2■□□□□ 0.66
ACTN1-217ENST00000556203 FOXO4P98177 505 aa19.2■□□□□ 0.66
ACTN1-217ENST00000556203 API5Q9BZZ5 524 aaKnown RBP19.2■□□□□ 0.66
ACTN1-217ENST00000556203 VPS33BQ9H267 617 aa19.2■□□□□ 0.66
ACTN1-217ENST00000556203 CCDC88AQ3V6T2 1871 aa19.2■□□□□ 0.66
ACTN1-217ENST00000556203 NBPF7P0C2Y1 421 aaPredicted RBP19.19■□□□□ 0.66
ACTN1-217ENST00000556203 C1QTNF8P60827 252 aa19.19■□□□□ 0.66
ACTN1-217ENST00000556203 EPHA10Q5JZY3 1008 aa19.19■□□□□ 0.66
ACTN1-217ENST00000556203 NIM1KQ8IY84 436 aa19.19■□□□□ 0.66
ACTN1-217ENST00000556203 CHMP3Q9Y3E7 222 aa19.19■□□□□ 0.66
ACTN1-217ENST00000556203 COL4A5P29400 1685 aa19.19■□□□□ 0.66
ACTN1-217ENST00000556203 LRRC37AA6NMS7 1700 aa19.18■□□□□ 0.66
ACTN1-217ENST00000556203 IGHMBP2P38935 993 aaKnown RBP19.18■□□□□ 0.66
ACTN1-217ENST00000556203 KIAA2012Q0VF49 1180 aa19.18■□□□□ 0.66
ACTN1-217ENST00000556203 SUCLG2Q96I99 432 aa19.18■□□□□ 0.66
ACTN1-217ENST00000556203 ANKIB1Q9P2G1 1089 aa19.18■□□□□ 0.66
ACTN1-217ENST00000556203 POLLQ9UGP5 575 aa19.18■□□□□ 0.66
ACTN1-217ENST00000556203 KIF16BQ96L93 1317 aa19.18■□□□□ 0.66
ACTN1-217ENST00000556203 DICER1Q9UPY3 1922 aaKnown RBP19.17■□□□□ 0.66
ACTN1-217ENST00000556203 C6orf229H3BNL8 230 aa19.17■□□□□ 0.66
ACTN1-217ENST00000556203 BCAR3O75815 825 aa19.17■□□□□ 0.66
ACTN1-217ENST00000556203 EIF6P56537 245 aaKnown RBP19.17■□□□□ 0.66
ACTN1-217ENST00000556203 LMBR1LQ6UX01 489 aa19.17■□□□□ 0.66
ACTN1-217ENST00000556203 BSDC1Q9NW68 430 aaPredicted RBP19.17■□□□□ 0.66
ACTN1-217ENST00000556203 DUOX1Q9NRD9 1551 aa19.17■□□□□ 0.66
ACTN1-217ENST00000556203 UTYO14607 1347 aa19.17■□□□□ 0.66
ACTN1-217ENST00000556203 ANKRD18BA2A2Z9 1011 aa19.16■□□□□ 0.66
ACTN1-217ENST00000556203 VEGFAP15692 232 aaPredicted RBP19.16■□□□□ 0.66
ACTN1-217ENST00000556203 CCT4P50991 539 aaKnown RBP19.16■□□□□ 0.66
ACTN1-217ENST00000556203 IFIT5Q13325 482 aaKnown RBP19.16■□□□□ 0.66
ACTN1-217ENST00000556203 C16orf71Q8IYS4 520 aaPredicted RBP19.16■□□□□ 0.66
ACTN1-217ENST00000556203 TBC1D16Q8TBP0 767 aa19.16■□□□□ 0.66
ACTN1-217ENST00000556203 ARHGAP45Q92619 1136 aa19.16■□□□□ 0.66
ACTN1-217ENST00000556203 PODXL2Q9NZ53 605 aa19.16■□□□□ 0.66
ACTN1-217ENST00000556203 GGA1Q9UJY5 639 aa19.16■□□□□ 0.66
ACTN1-217ENST00000556203 POTECB2RU33 542 aa19.15■□□□□ 0.66
ACTN1-217ENST00000556203 UFL1O94874 794 aa19.15■□□□□ 0.66
ACTN1-217ENST00000556203 WASHC4Q2M389 1173 aa19.15■□□□□ 0.66
ACTN1-217ENST00000556203 KAZALD1Q96I82 304 aa19.15■□□□□ 0.66
ACTN1-217ENST00000556203 GPR101Q96P66 508 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms