RNA–Protein interactions for RNA: ENST00000556112.5

NUMB-220, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 4

Gene NUMB, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-220ENST00000556112 PIK3C2BO00750 1634 aa6.28□□□□□ -1.4
NUMB-220ENST00000556112 SCAF11Q99590 1463 aaKnown RBP6.28□□□□□ -1.4
NUMB-220ENST00000556112 RPGRIP1LQ68CZ1 1315 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 RIMS2Q9UQ26 1411 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 F11P03951 625 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 MTFR1Q15390 333 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 RGL3Q3MIN7 710 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 SV2AQ7L0J3 742 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 TNS4Q8IZW8 715 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 SIX5Q8N196 739 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 PBXIP1Q96AQ6 731 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 SLC26A8Q96RN1 970 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 NIFKQ9BYG3 293 aaKnown RBP6.27□□□□□ -1.41
NUMB-220ENST00000556112 GPAMQ9HCL2 828 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 CUEDC1Q9NWM3 386 aaPredicted RBP6.27□□□□□ -1.41
NUMB-220ENST00000556112 TBX22Q9Y458 520 aa6.27□□□□□ -1.41
NUMB-220ENST00000556112 UBR1Q8IWV7 1749 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 A0A1B0GTH6 734 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 SFI1A8K8P3 1242 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 KCNA6P17658 529 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 PLA2G4AP47712 749 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 SRPK2P78362 688 aaKnown RBP6.26□□□□□ -1.41
NUMB-220ENST00000556112 DBN1Q16643 649 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 CRTC2Q53ET0 693 aaPredicted RBP6.26□□□□□ -1.41
NUMB-220ENST00000556112 CDCA8Q53HL2 280 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 TRIM22Q8IYM9 498 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 GPR161Q8N6U8 529 aaKnown RBP6.26□□□□□ -1.41
NUMB-220ENST00000556112 FBXO41Q8TF61 875 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 AIDAQ96BJ3 306 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 CABP1Q9NZU7 370 aa6.26□□□□□ -1.41
NUMB-220ENST00000556112 SCHIP1Q9P0W5 487 aaPredicted RBP6.26□□□□□ -1.41
NUMB-220ENST00000556112 CCDC144AA2RUR9 1427 aa6.25□□□□□ -1.41
NUMB-220ENST00000556112 ADGRB3O60242 1522 aa6.25□□□□□ -1.41
NUMB-220ENST00000556112 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.25□□□□□ -1.41
NUMB-220ENST00000556112 H7C1W4 665 aa6.25□□□□□ -1.41
NUMB-220ENST00000556112 WIPF1O43516 503 aa6.25□□□□□ -1.41
NUMB-220ENST00000556112 PTK7Q13308 1070 aa6.25□□□□□ -1.41
NUMB-220ENST00000556112 IQSEC3Q9UPP2 1182 aaPredicted RBP6.25□□□□□ -1.41
NUMB-220ENST00000556112 USP3Q9Y6I4 520 aa6.25□□□□□ -1.41
NUMB-220ENST00000556112 PLEKHG1Q9ULL1 1385 aa6.25□□□□□ -1.41
NUMB-220ENST00000556112 KDM5AP29375 1690 aaKnown RBP6.25□□□□□ -1.41
NUMB-220ENST00000556112 TMEM131LA2VDJ0 1609 aa6.25□□□□□ -1.41
NUMB-220ENST00000556112 ZFYVE9O95405 1425 aa6.25□□□□□ -1.41
NUMB-220ENST00000556112 NEURL4Q96JN8 1562 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L15C9J2P7 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L10C9JJH3 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L13C9JLJ4 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L12C9JPN9 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L11C9JVI0 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L21D6R901 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L18D6R9N7 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L22D6RA61 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L17D6RBQ6 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L19D6RCP7 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L20D6RJB6 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 DKK1O94907 266 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 CSB-PGBD3P0DP91 1061 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 MSX1P28360 303 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 EPHA4P54764 986 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 SEC13P55735 322 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 USP17L24Q0WX57 530 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 TBCELQ5QJ74 424 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 FOXR1Q6PIV2 292 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 SLC9A9Q8IVB4 645 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 PGBD3Q8N328 593 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 TSEN2Q8NCE0 465 aaKnown RBP6.24□□□□□ -1.41
NUMB-220ENST00000556112 ZNF837Q96EG3 531 aaPredicted RBP6.24□□□□□ -1.41
NUMB-220ENST00000556112 GMCL1Q96IK5 515 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 PARP3Q9Y6F1 533 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 LTBP4Q8N2S1 1624 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 TRPM2O94759 1503 aa6.24□□□□□ -1.41
NUMB-220ENST00000556112 ANKRD30BQ9BXX2 1392 aa6.23□□□□□ -1.41
NUMB-220ENST00000556112 FAM196BA6NMK8 535 aa6.23□□□□□ -1.41
NUMB-220ENST00000556112 M0R2N6 131 aa6.23□□□□□ -1.41
NUMB-220ENST00000556112 FOXK2Q01167 660 aa6.23□□□□□ -1.41
NUMB-220ENST00000556112 DPYDQ12882 1025 aa6.23□□□□□ -1.41
NUMB-220ENST00000556112 ANKMY2Q8IV38 441 aa6.23□□□□□ -1.41
NUMB-220ENST00000556112 COL25A1Q9BXS0 654 aaPredicted RBP6.23□□□□□ -1.41
NUMB-220ENST00000556112 NUCKS1Q9H1E3 243 aaKnown RBP6.23□□□□□ -1.41
NUMB-220ENST00000556112 RUBCNLQ9H714 662 aa6.23□□□□□ -1.41
NUMB-220ENST00000556112 PIK3R4Q99570 1358 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 UBAP1LF5GYI3 381 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 TOM1O60784 492 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 ATG7O95352 703 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 INSM1Q01101 510 aaPredicted RBP6.22□□□□□ -1.41
NUMB-220ENST00000556112 NBPF1Q3BBV0 1214 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 ZNF295-AS1Q8N0V1 137 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 L3MBTL2Q969R5 705 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 GTPBP3Q969Y2 492 aaKnown RBP6.22□□□□□ -1.41
NUMB-220ENST00000556112 CNTNAP3BQ96NU0 1288 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 ARXQ96QS3 562 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 HINFPQ9BQA5 517 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 CNTNAP3Q9BZ76 1288 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 TSPAN10Q9H1Z9 355 aaPredicted RBP6.22□□□□□ -1.41
NUMB-220ENST00000556112 ZNF232Q9UNY5 417 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 AMOTL2Q9Y2J4 779 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 SPHKAPQ2M3C7 1700 aa6.22□□□□□ -1.41
NUMB-220ENST00000556112 CPS1P31327 1500 aa6.21□□□□□ -1.42
NUMB-220ENST00000556112 IQGAP1P46940 1657 aa6.21□□□□□ -1.42
NUMB-220ENST00000556112 GPR25O00155 361 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms