RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 TMC4Q7Z404 712 aa25.6■■□□□ 1.69
PRKCH-219ENST00000555906 MKRN1Q9UHC7 482 aaKnown RBP25.6■■□□□ 1.69
PRKCH-219ENST00000555906 TMEM88BA6NKF7 163 aa25.59■■□□□ 1.69
PRKCH-219ENST00000555906 TRPM7Q96QT4 1865 aa25.59■■□□□ 1.69
PRKCH-219ENST00000555906 KIAA2012Q0VF49 1180 aa25.57■■□□□ 1.68
PRKCH-219ENST00000555906 COL13A1Q5TAT6 717 aaPredicted RBP25.57■■□□□ 1.68
PRKCH-219ENST00000555906 MAP1SQ66K74 1059 aaPredicted RBP25.57■■□□□ 1.68
PRKCH-219ENST00000555906 CNTROBQ8N137 903 aa25.57■■□□□ 1.68
PRKCH-219ENST00000555906 MPNDQ8N594 471 aa25.57■■□□□ 1.68
PRKCH-219ENST00000555906 ZNRF3Q9ULT6 936 aa25.57■■□□□ 1.68
PRKCH-219ENST00000555906 COL4A1P02462 1669 aa25.57■■□□□ 1.68
PRKCH-219ENST00000555906 ATP5J2-PTCD1G3V325 749 aa25.56■■□□□ 1.68
PRKCH-219ENST00000555906 GOLGA2Q08379 1002 aa25.56■■□□□ 1.68
PRKCH-219ENST00000555906 TRIM28Q13263 835 aaKnown RBP25.56■■□□□ 1.68
PRKCH-219ENST00000555906 FAM89AQ96GI7 184 aa25.56■■□□□ 1.68
PRKCH-219ENST00000555906 EPS15P42566 896 aa25.55■■□□□ 1.68
PRKCH-219ENST00000555906 SF3B3Q15393 1217 aaKnown RBP25.55■■□□□ 1.68
PRKCH-219ENST00000555906 CDHR2Q9BYE9 1310 aa25.55■■□□□ 1.68
PRKCH-219ENST00000555906 USP50Q70EL3 339 aaPredicted RBP25.54■■□□□ 1.68
PRKCH-219ENST00000555906 ZNF428Q96B54 188 aa25.54■■□□□ 1.68
PRKCH-219ENST00000555906 THSD7BQ9C0I4 1608 aa25.53■■□□□ 1.68
PRKCH-219ENST00000555906 CXCL9Q07325 125 aa25.53■■□□□ 1.68
PRKCH-219ENST00000555906 GPRC5DQ9NZD1 345 aa25.53■■□□□ 1.68
PRKCH-219ENST00000555906 RIC3Q7Z5B4 369 aa25.52■■□□□ 1.68
PRKCH-219ENST00000555906 CHMP4AQ9BY43 222 aa25.51■■□□□ 1.67
PRKCH-219ENST00000555906 PHAXQ9H814 394 aaKnown RBP25.51■■□□□ 1.67
PRKCH-219ENST00000555906 ADARB2Q9NS39 739 aaKnown RBP25.51■■□□□ 1.67
PRKCH-219ENST00000555906 IRS4O14654 1257 aaPredicted RBP25.5■■□□□ 1.67
PRKCH-219ENST00000555906 CIAPIN1Q6FI81 312 aa25.5■■□□□ 1.67
PRKCH-219ENST00000555906 ZBTB38Q8NAP3 1195 aaPredicted RBP25.5■■□□□ 1.67
PRKCH-219ENST00000555906 CELF1Q92879 486 aaKnown RBP25.5■■□□□ 1.67
PRKCH-219ENST00000555906 MYH3P11055 1940 aa25.49■■□□□ 1.67
PRKCH-219ENST00000555906 RASSF10A6NK89 507 aa25.49■■□□□ 1.67
PRKCH-219ENST00000555906 ELL2O00472 640 aaPredicted RBP25.49■■□□□ 1.67
PRKCH-219ENST00000555906 C8orf58Q8NAV2 365 aa25.49■■□□□ 1.67
PRKCH-219ENST00000555906 HSP90B1P14625 803 aaKnown RBP25.48■■□□□ 1.67
PRKCH-219ENST00000555906 VEGFBP49765 207 aa25.48■■□□□ 1.67
PRKCH-219ENST00000555906 GMPSP49915 693 aaPredicted RBP25.48■■□□□ 1.67
PRKCH-219ENST00000555906 RTL5Q5HYW3 569 aaPredicted RBP25.48■■□□□ 1.67
PRKCH-219ENST00000555906 TNIP1Q15025 636 aa25.47■■□□□ 1.67
PRKCH-219ENST00000555906 CCDC27Q2M243 656 aa25.47■■□□□ 1.67
PRKCH-219ENST00000555906 CCDC30Q5VVM6 783 aa25.47■■□□□ 1.67
PRKCH-219ENST00000555906 CCDC191Q8NCU4 936 aa25.47■■□□□ 1.67
PRKCH-219ENST00000555906 MYD88Q99836 296 aa25.47■■□□□ 1.67
PRKCH-219ENST00000555906 DDX58O95786 925 aaKnown RBP25.46■■□□□ 1.67
PRKCH-219ENST00000555906 TNS4Q8IZW8 715 aa25.46■■□□□ 1.67
PRKCH-219ENST00000555906 YDJCA8MPS7 323 aa25.45■■□□□ 1.66
PRKCH-219ENST00000555906 RAD17O75943 681 aa25.45■■□□□ 1.66
PRKCH-219ENST00000555906 PSME4Q14997 1843 aa25.44■■□□□ 1.66
PRKCH-219ENST00000555906 CACNA1FO60840 1977 aa25.44■■□□□ 1.66
PRKCH-219ENST00000555906 PCCAP05165 728 aaPredicted RBP25.44■■□□□ 1.66
PRKCH-219ENST00000555906 WASHC4Q2M389 1173 aa25.44■■□□□ 1.66
PRKCH-219ENST00000555906 CCDC184Q52MB2 194 aa25.44■■□□□ 1.66
PRKCH-219ENST00000555906 METTL22Q9BUU2 404 aaPredicted RBP25.44■■□□□ 1.66
PRKCH-219ENST00000555906 CWC25Q9NXE8 425 aaPredicted RBP25.44■■□□□ 1.66
PRKCH-219ENST00000555906 ABT1Q9ULW3 272 aaKnown RBP25.44■■□□□ 1.66
PRKCH-219ENST00000555906 NSFL1CQ9UNZ2 370 aaKnown RBP25.44■■□□□ 1.66
PRKCH-219ENST00000555906 GPSM2P81274 684 aa25.43■■□□□ 1.66
PRKCH-219ENST00000555906 DEFB115Q30KQ5 88 aa25.43■■□□□ 1.66
PRKCH-219ENST00000555906 TSPYL6Q8N831 410 aa25.43■■□□□ 1.66
PRKCH-219ENST00000555906 BCL2L13Q9BXK5 485 aa25.43■■□□□ 1.66
PRKCH-219ENST00000555906 SCN9AQ15858 1988 aa25.43■■□□□ 1.66
PRKCH-219ENST00000555906 RPS8P62241 208 aaKnown RBP25.42■■□□□ 1.66
PRKCH-219ENST00000555906 TSR2Q969E8 191 aaKnown RBP25.42■■□□□ 1.66
PRKCH-219ENST00000555906 SPEF2Q9C093 1822 aa25.42■■□□□ 1.66
PRKCH-219ENST00000555906 FOXN1O15353 648 aa25.41■■□□□ 1.66
PRKCH-219ENST00000555906 CCDC152Q4G0S7 254 aa25.41■■□□□ 1.66
PRKCH-219ENST00000555906 EYA3Q99504 573 aa25.41■■□□□ 1.66
PRKCH-219ENST00000555906 POLLQ9UGP5 575 aa25.41■■□□□ 1.66
PRKCH-219ENST00000555906 C6orf229H3BNL8 230 aa25.4■■□□□ 1.66
PRKCH-219ENST00000555906 TRAF5O00463 557 aa25.4■■□□□ 1.66
PRKCH-219ENST00000555906 PDE8AO60658 829 aa25.4■■□□□ 1.66
PRKCH-219ENST00000555906 FMR1Q06787 632 aaKnown RBP eCLIP25.4■■□□□ 1.66
PRKCH-219ENST00000555906 NCBP3Q53F19 620 aaKnown RBP25.4■■□□□ 1.66
PRKCH-219ENST00000555906 WWC1Q8IX03 1113 aa25.4■■□□□ 1.66
PRKCH-219ENST00000555906 ZC3H15Q8WU90 426 aaKnown RBP25.4■■□□□ 1.66
PRKCH-219ENST00000555906 AIDAQ96BJ3 306 aa25.4■■□□□ 1.66
PRKCH-219ENST00000555906 PODXL2Q9NZ53 605 aa25.4■■□□□ 1.66
PRKCH-219ENST00000555906 PGAP2Q9UHJ9 254 aa25.4■■□□□ 1.66
PRKCH-219ENST00000555906 IL16Q14005 1332 aa25.39■■□□□ 1.66
PRKCH-219ENST00000555906 TBC1D16Q8TBP0 767 aa25.39■■□□□ 1.66
PRKCH-219ENST00000555906 STK31Q9BXU1 1019 aa25.39■■□□□ 1.66
PRKCH-219ENST00000555906 DBNDD1Q9H9R9 158 aa25.39■■□□□ 1.66
PRKCH-219ENST00000555906 MAP3K2Q9Y2U5 619 aa25.39■■□□□ 1.66
PRKCH-219ENST00000555906 WDR33Q9C0J8 1336 aaKnown RBP25.38■■□□□ 1.65
PRKCH-219ENST00000555906 KSR2Q6VAB6 950 aa25.38■■□□□ 1.65
PRKCH-219ENST00000555906 TRPM4Q8TD43 1214 aa25.38■■□□□ 1.65
PRKCH-219ENST00000555906 SEC31BQ9NQW1 1179 aa25.38■■□□□ 1.65
PRKCH-219ENST00000555906 WBP1LQ9NX94 342 aa25.38■■□□□ 1.65
PRKCH-219ENST00000555906 CNOT7Q9UIV1 285 aaKnown RBP25.38■■□□□ 1.65
PRKCH-219ENST00000555906 PSMD14O00487 310 aa25.37■■□□□ 1.65
PRKCH-219ENST00000555906 ECE2O60344 883 aa25.37■■□□□ 1.65
PRKCH-219ENST00000555906 ZEB1P37275 1124 aaPredicted RBP25.37■■□□□ 1.65
PRKCH-219ENST00000555906 CST9Q5W186 159 aa25.37■■□□□ 1.65
PRKCH-219ENST00000555906 MICALL2Q8IY33 904 aa25.37■■□□□ 1.65
PRKCH-219ENST00000555906 DPF2Q92785 391 aa25.37■■□□□ 1.65
PRKCH-219ENST00000555906 TLL2Q9Y6L7 1015 aa25.37■■□□□ 1.65
PRKCH-219ENST00000555906 RTL9Q8NET4 1388 aa25.36■■□□□ 1.65
PRKCH-219ENST00000555906 H7C1D1 291 aa25.36■■□□□ 1.65
PRKCH-219ENST00000555906 RIMBP2O15034 1052 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms