RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 KIAA2012Q0VF49 1180 aa16.42■□□□□ 0.22
HNRNPC-221ENST00000555883 EAPPQ56P03 285 aaPredicted RBP16.42■□□□□ 0.22
HNRNPC-221ENST00000555883 CCDC30Q5VVM6 783 aa16.42■□□□□ 0.22
HNRNPC-221ENST00000555883 FAM89AQ96GI7 184 aa16.42■□□□□ 0.22
HNRNPC-221ENST00000555883 ZNRF3Q9ULT6 936 aa16.42■□□□□ 0.22
HNRNPC-221ENST00000555883 CDHR2Q9BYE9 1310 aa16.42■□□□□ 0.22
HNRNPC-221ENST00000555883 TCERG1O14776 1098 aaKnown RBP16.41■□□□□ 0.22
HNRNPC-221ENST00000555883 AOC3Q16853 763 aa16.41■□□□□ 0.22
HNRNPC-221ENST00000555883 RIC3Q7Z5B4 369 aa16.41■□□□□ 0.22
HNRNPC-221ENST00000555883 SLC51AQ86UW1 340 aa16.41■□□□□ 0.22
HNRNPC-221ENST00000555883 ZBTB38Q8NAP3 1195 aaPredicted RBP16.41■□□□□ 0.22
HNRNPC-221ENST00000555883 IL16Q14005 1332 aa16.41■□□□□ 0.22
HNRNPC-221ENST00000555883 TMEM88BA6NKF7 163 aa16.4■□□□□ 0.22
HNRNPC-221ENST00000555883 ATP5J2-PTCD1G3V325 749 aa16.4■□□□□ 0.22
HNRNPC-221ENST00000555883 USP50Q70EL3 339 aaPredicted RBP16.4■□□□□ 0.22
HNRNPC-221ENST00000555883 C8orf58Q8NAV2 365 aa16.4■□□□□ 0.22
HNRNPC-221ENST00000555883 CCDC191Q8NCU4 936 aa16.4■□□□□ 0.22
HNRNPC-221ENST00000555883 PHAXQ9H814 394 aaKnown RBP16.4■□□□□ 0.22
HNRNPC-221ENST00000555883 GJA3Q9Y6H8 435 aa16.4■□□□□ 0.22
HNRNPC-221ENST00000555883 CNTNAP1P78357 1384 aa16.39■□□□□ 0.21
HNRNPC-221ENST00000555883 LTBP1Q14766 1721 aa16.39■□□□□ 0.21
HNRNPC-221ENST00000555883 DUOX1Q9NRD9 1551 aa16.39■□□□□ 0.21
HNRNPC-221ENST00000555883 IRS4O14654 1257 aaPredicted RBP16.39■□□□□ 0.21
HNRNPC-221ENST00000555883 DDX58O95786 925 aaKnown RBP16.39■□□□□ 0.21
HNRNPC-221ENST00000555883 CNTROBQ8N137 903 aa16.39■□□□□ 0.21
HNRNPC-221ENST00000555883 CLEC11AQ9Y240 323 aa16.39■□□□□ 0.21
HNRNPC-221ENST00000555883 ELL2O00472 640 aaPredicted RBP16.38■□□□□ 0.21
HNRNPC-221ENST00000555883 CXCL9Q07325 125 aa16.38■□□□□ 0.21
HNRNPC-221ENST00000555883 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
HNRNPC-221ENST00000555883 WWC1Q8IX03 1113 aa16.38■□□□□ 0.21
HNRNPC-221ENST00000555883 GPRC5DQ9NZD1 345 aa16.38■□□□□ 0.21
HNRNPC-221ENST00000555883 PCCAP05165 728 aaPredicted RBP16.37■□□□□ 0.21
HNRNPC-221ENST00000555883 EPS15P42566 896 aa16.37■□□□□ 0.21
HNRNPC-221ENST00000555883 TNIP1Q15025 636 aa16.37■□□□□ 0.21
HNRNPC-221ENST00000555883 METTL22Q9BUU2 404 aaPredicted RBP16.37■□□□□ 0.21
HNRNPC-221ENST00000555883 ADARB2Q9NS39 739 aaKnown RBP16.37■□□□□ 0.21
HNRNPC-221ENST00000555883 MAP1SQ66K74 1059 aaPredicted RBP16.36■□□□□ 0.21
HNRNPC-221ENST00000555883 CIAPIN1Q6FI81 312 aa16.36■□□□□ 0.21
HNRNPC-221ENST00000555883 CELF1Q92879 486 aaKnown RBP16.36■□□□□ 0.21
HNRNPC-221ENST00000555883 CWC25Q9NXE8 425 aaPredicted RBP16.36■□□□□ 0.21
HNRNPC-221ENST00000555883 ZNF316A6NFI3 1004 aaPredicted RBP16.35■□□□□ 0.21
HNRNPC-221ENST00000555883 RPS8P62241 208 aaKnown RBP16.35■□□□□ 0.21
HNRNPC-221ENST00000555883 TSPYL6Q8N831 410 aa16.35■□□□□ 0.21
HNRNPC-221ENST00000555883 MYD88Q99836 296 aa16.35■□□□□ 0.21
HNRNPC-221ENST00000555883 PODXL2Q9NZ53 605 aa16.35■□□□□ 0.21
HNRNPC-221ENST00000555883 RASSF10A6NK89 507 aa16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 ANP32CO43423 234 aa16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 PDE8AO60658 829 aa16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 HSPA1AP0DMV8 641 aaKnown RBP16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 HSPA1BP0DMV9 641 aaKnown RBP16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 WASHC4Q2M389 1173 aa16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 CCDC152Q4G0S7 254 aa16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 KSR2Q6VAB6 950 aa16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 STK31Q9BXU1 1019 aa16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 MRS2Q9HD23 443 aa16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 MKRN1Q9UHC7 482 aaKnown RBP16.34■□□□□ 0.21
HNRNPC-221ENST00000555883 TWISTNBQ3B726 338 aaPredicted RBP16.33■□□□□ 0.2
HNRNPC-221ENST00000555883 RTL5Q5HYW3 569 aaPredicted RBP16.33■□□□□ 0.2
HNRNPC-221ENST00000555883 ZC3H15Q8WU90 426 aaKnown RBP16.33■□□□□ 0.2
HNRNPC-221ENST00000555883 TSR2Q969E8 191 aaKnown RBP16.33■□□□□ 0.2
HNRNPC-221ENST00000555883 EYA3Q99504 573 aa16.33■□□□□ 0.2
HNRNPC-221ENST00000555883 PGAP2Q9UHJ9 254 aa16.33■□□□□ 0.2
HNRNPC-221ENST00000555883 NSFL1CQ9UNZ2 370 aaKnown RBP16.33■□□□□ 0.2
HNRNPC-221ENST00000555883 YDJCA8MPS7 323 aa16.32■□□□□ 0.2
HNRNPC-221ENST00000555883 GMPSP49915 693 aaPredicted RBP16.32■□□□□ 0.2
HNRNPC-221ENST00000555883 WDR63Q8IWG1 891 aa16.32■□□□□ 0.2
HNRNPC-221ENST00000555883 DPF2Q92785 391 aa16.32■□□□□ 0.2
HNRNPC-221ENST00000555883 POLLQ9UGP5 575 aa16.32■□□□□ 0.2
HNRNPC-221ENST00000555883 MAP3K2Q9Y2U5 619 aa16.32■□□□□ 0.2
HNRNPC-221ENST00000555883 TAF1P21675 1872 aa16.31■□□□□ 0.2
HNRNPC-221ENST00000555883 COL4A1P02462 1669 aa16.31■□□□□ 0.2
HNRNPC-221ENST00000555883 PI4KAP2A4QPH2 592 aa16.31■□□□□ 0.2
HNRNPC-221ENST00000555883 RAD17O75943 681 aa16.31■□□□□ 0.2
HNRNPC-221ENST00000555883 GPSM2P81274 684 aa16.31■□□□□ 0.2
HNRNPC-221ENST00000555883 NEXNQ0ZGT2 675 aa16.31■□□□□ 0.2
HNRNPC-221ENST00000555883 COL13A1Q5TAT6 717 aaPredicted RBP16.31■□□□□ 0.2
HNRNPC-221ENST00000555883 PI4KAP1Q8N8J0 262 aa16.31■□□□□ 0.2
HNRNPC-221ENST00000555883 TBC1D16Q8TBP0 767 aa16.31■□□□□ 0.2
HNRNPC-221ENST00000555883 ZNF428Q96B54 188 aa16.31■□□□□ 0.2
HNRNPC-221ENST00000555883 RTL9Q8NET4 1388 aa16.3■□□□□ 0.2
HNRNPC-221ENST00000555883 IGKV5-2P06315 115 aa16.3■□□□□ 0.2
HNRNPC-221ENST00000555883 RPS12P25398 132 aaKnown RBP16.3■□□□□ 0.2
HNRNPC-221ENST00000555883 VEGFBP49765 207 aa16.3■□□□□ 0.2
HNRNPC-221ENST00000555883 DEFB115Q30KQ5 88 aa16.3■□□□□ 0.2
HNRNPC-221ENST00000555883 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
HNRNPC-221ENST00000555883 ZNF609O15014 1411 aa16.29■□□□□ 0.2
HNRNPC-221ENST00000555883 FANCIQ9NVI1 1328 aa16.29■□□□□ 0.2
HNRNPC-221ENST00000555883 C6orf229H3BNL8 230 aa16.29■□□□□ 0.2
HNRNPC-221ENST00000555883 SEC31BQ9NQW1 1179 aa16.29■□□□□ 0.2
HNRNPC-221ENST00000555883 NEURL1BA8MQ27 555 aa16.28■□□□□ 0.2
HNRNPC-221ENST00000555883 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
HNRNPC-221ENST00000555883 CTSWP56202 376 aa16.28■□□□□ 0.2
HNRNPC-221ENST00000555883 CDC5LQ99459 802 aaKnown RBP16.28■□□□□ 0.2
HNRNPC-221ENST00000555883 ZC3H12CQ9C0D7 883 aaKnown RBP16.28■□□□□ 0.2
HNRNPC-221ENST00000555883 CNOT7Q9UIV1 285 aaKnown RBP16.28■□□□□ 0.2
HNRNPC-221ENST00000555883 H7C1D1 291 aa16.27■□□□□ 0.2
HNRNPC-221ENST00000555883 PSMD14O00487 310 aa16.27■□□□□ 0.2
HNRNPC-221ENST00000555883 ECE2O60344 883 aa16.27■□□□□ 0.2
HNRNPC-221ENST00000555883 CST9Q5W186 159 aa16.27■□□□□ 0.2
HNRNPC-221ENST00000555883 ANKRD18AQ8IVF6 992 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms