RNA–Protein interactions for RNA: ENST00000555604.1

PRKCH-217, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-217ENST00000555604 IFIT5Q13325 482 aaKnown RBP8.28□□□□□ -1.08
PRKCH-217ENST00000555604 AAMPQ13685 434 aa8.28□□□□□ -1.08
PRKCH-217ENST00000555604 RABL6Q3YEC7 729 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-217ENST00000555604 PRPF40BQ6NWY9 871 aaKnown RBP8.28□□□□□ -1.08
PRKCH-217ENST00000555604 VPS33BQ9H267 617 aa8.28□□□□□ -1.08
PRKCH-217ENST00000555604 DDX19BQ9UMR2 479 aa8.28□□□□□ -1.08
PRKCH-217ENST00000555604 BCS1LQ9Y276 419 aa8.28□□□□□ -1.08
PRKCH-217ENST00000555604 ANKRD18BA2A2Z9 1011 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 GNAI2P04899 355 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 NBPF7P0C2Y1 421 aaPredicted RBP8.27□□□□□ -1.09
PRKCH-217ENST00000555604 RPS8P62241 208 aaKnown RBP8.27□□□□□ -1.09
PRKCH-217ENST00000555604 FOXO4P98177 505 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 CCDC57Q2TAC2 916 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 RTL5Q5HYW3 569 aaPredicted RBP8.27□□□□□ -1.09
PRKCH-217ENST00000555604 ANKRD18AQ8IVF6 992 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 SP8Q8IXZ3 490 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 SYNE4Q8N205 404 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 CCDC24Q8N4L8 307 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 TMEM57Q8N5G2 664 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 FBXO3Q9UK99 471 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 ATP6V0A2Q9Y487 856 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 LTBP3Q9NS15 1303 aa8.27□□□□□ -1.09
PRKCH-217ENST00000555604 PPEF1O14829 653 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-217ENST00000555604 ZBTB7BO15156 539 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-217ENST00000555604 IGHMBP2P38935 993 aaKnown RBP8.26□□□□□ -1.09
PRKCH-217ENST00000555604 MVPQ14764 893 aaKnown RBP8.26□□□□□ -1.09
PRKCH-217ENST00000555604 CCDC93Q567U6 631 aa8.26□□□□□ -1.09
PRKCH-217ENST00000555604 ITPRIPQ8IWB1 547 aa8.26□□□□□ -1.09
PRKCH-217ENST00000555604 SUPT20HQ8NEM7 779 aa8.26□□□□□ -1.09
PRKCH-217ENST00000555604 C7orf43Q8WVR3 580 aa8.26□□□□□ -1.09
PRKCH-217ENST00000555604 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
PRKCH-217ENST00000555604 BSDC1Q9NW68 430 aaPredicted RBP8.26□□□□□ -1.09
PRKCH-217ENST00000555604 ITGA6P23229 1130 aa8.25□□□□□ -1.09
PRKCH-217ENST00000555604 RRP1P56182 461 aaKnown RBP8.25□□□□□ -1.09
PRKCH-217ENST00000555604 MTX1Q13505 466 aa8.25□□□□□ -1.09
PRKCH-217ENST00000555604 LMBR1LQ6UX01 489 aa8.25□□□□□ -1.09
PRKCH-217ENST00000555604 C3orf67Q6ZVT6 689 aa8.25□□□□□ -1.09
PRKCH-217ENST00000555604 SUCLG2Q96I99 432 aa8.25□□□□□ -1.09
PRKCH-217ENST00000555604 PSMD1Q99460 953 aa8.25□□□□□ -1.09
PRKCH-217ENST00000555604 MPHOSPH8Q99549 860 aa8.25□□□□□ -1.09
PRKCH-217ENST00000555604 ANKRD2Q9GZV1 360 aa8.25□□□□□ -1.09
PRKCH-217ENST00000555604 GREM2Q9H772 168 aa8.25□□□□□ -1.09
PRKCH-217ENST00000555604 ZC3H4Q9UPT8 1303 aaKnown RBP8.25□□□□□ -1.09
PRKCH-217ENST00000555604 DLEC1Q9Y238 1755 aa8.25□□□□□ -1.09
PRKCH-217ENST00000555604 ANKRD31Q8N7Z5 1873 aa8.24□□□□□ -1.09
PRKCH-217ENST00000555604 KIAA1551Q9HCM1 1747 aa8.24□□□□□ -1.09
PRKCH-217ENST00000555604 C21orf2O43822 256 aa8.24□□□□□ -1.09
PRKCH-217ENST00000555604 YBX3P16989 372 aaKnown RBP eCLIP8.24□□□□□ -1.09
PRKCH-217ENST00000555604 FKBP4Q02790 459 aaKnown RBP eCLIP8.24□□□□□ -1.09
PRKCH-217ENST00000555604 TAF7LQ5H9L4 462 aa8.24□□□□□ -1.09
PRKCH-217ENST00000555604 ARHGAP27Q6ZUM4 889 aa8.24□□□□□ -1.09
PRKCH-217ENST00000555604 PELP1Q8IZL8 1130 aaKnown RBP8.24□□□□□ -1.09
PRKCH-217ENST00000555604 JARID2Q92833 1246 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-217ENST00000555604 KAZALD1Q96I82 304 aa8.24□□□□□ -1.09
PRKCH-217ENST00000555604 MEIS3Q99687 375 aa8.24□□□□□ -1.09
PRKCH-217ENST00000555604 RTFDC1Q9BY42 306 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-217ENST00000555604 TAOK3Q9H2K8 898 aa8.24□□□□□ -1.09
PRKCH-217ENST00000555604 BICC1Q9H694 974 aaKnown RBP8.24□□□□□ -1.09
PRKCH-217ENST00000555604 PODXL2Q9NZ53 605 aa8.24□□□□□ -1.09
PRKCH-217ENST00000555604 LAMB2P55268 1798 aa8.24□□□□□ -1.09
PRKCH-217ENST00000555604 N4BP2Q86UW6 1770 aaPredicted RBP8.24□□□□□ -1.09
PRKCH-217ENST00000555604 CIAO1O76071 339 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 RLBP1P12271 317 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 LMNB1P20700 586 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 FAM161AQ3B820 660 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 DPP8Q6V1X1 898 aaPredicted RBP8.23□□□□□ -1.09
PRKCH-217ENST00000555604 LDHAL6AQ6ZMR3 332 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 RPAP2Q8IXW5 612 aaPredicted RBP8.23□□□□□ -1.09
PRKCH-217ENST00000555604 MPNDQ8N594 471 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 ANKRD44Q8N8A2 993 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 PANK1Q8TE04 598 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 CELF1Q92879 486 aaKnown RBP8.23□□□□□ -1.09
PRKCH-217ENST00000555604 EYA3Q99504 573 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 ZBTB40Q9NUA8 1239 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 CHMP3Q9Y3E7 222 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 TNRC6CQ9HCJ0 1690 aaKnown RBP8.23□□□□□ -1.09
PRKCH-217ENST00000555604 MROH5Q6ZUA9 1318 aa8.23□□□□□ -1.09
PRKCH-217ENST00000555604 DDX60Q8IY21 1712 aaKnown RBP8.23□□□□□ -1.09
PRKCH-217ENST00000555604 PLIN1O60240 522 aa8.22□□□□□ -1.09
PRKCH-217ENST00000555604 CENPBP07199 599 aaPredicted RBP8.22□□□□□ -1.09
PRKCH-217ENST00000555604 ATP2B4P23634 1241 aa8.22□□□□□ -1.09
PRKCH-217ENST00000555604 ATP8B2P98198 1209 aa8.22□□□□□ -1.09
PRKCH-217ENST00000555604 EPHA10Q5JZY3 1008 aa8.22□□□□□ -1.09
PRKCH-217ENST00000555604 COPRSQ9NQ92 184 aa8.22□□□□□ -1.09
PRKCH-217ENST00000555604 SEC31BQ9NQW1 1179 aa8.22□□□□□ -1.09
PRKCH-217ENST00000555604 MINPP1Q9UNW1 487 aa8.22□□□□□ -1.09
PRKCH-217ENST00000555604 LEMD3Q9Y2U8 911 aa8.22□□□□□ -1.09
PRKCH-217ENST00000555604 COG6Q9Y2V7 657 aa8.22□□□□□ -1.09
PRKCH-217ENST00000555604 LRRFIP2Q9Y608 721 aaKnown RBP8.22□□□□□ -1.09
PRKCH-217ENST00000555604 XDHP47989 1333 aa8.22□□□□□ -1.09
PRKCH-217ENST00000555604 BRCA1P38398 1863 aaKnown RBP8.21□□□□□ -1.09
PRKCH-217ENST00000555604 COL11A2P13942 1736 aaPredicted RBP8.21□□□□□ -1.09
PRKCH-217ENST00000555604 SRGAP3O43295 1099 aa8.21□□□□□ -1.1
PRKCH-217ENST00000555604 HMMRO75330 724 aa8.21□□□□□ -1.1
PRKCH-217ENST00000555604 HSP90AB4PQ58FF6 505 aa8.21□□□□□ -1.1
PRKCH-217ENST00000555604 CCDC85AQ96PX6 553 aaPredicted RBP8.21□□□□□ -1.1
PRKCH-217ENST00000555604 CNNM1Q9NRU3 951 aa8.21□□□□□ -1.1
PRKCH-217ENST00000555604 ANKIB1Q9P2G1 1089 aa8.21□□□□□ -1.1
PRKCH-217ENST00000555604 GGA1Q9UJY5 639 aa8.21□□□□□ -1.1
PRKCH-217ENST00000555604 NSFL1CQ9UNZ2 370 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms