RNA–Protein interactions for RNA: ENST00000555578.1

LINC00638-201, long intergenic non-protein coding RNA 638, humanhuman

BASIC

Gene LINC00638, Length 2,518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00638-201ENST00000555578 SNX21Q969T3 373 aa16.94■□□□□ 0.3
LINC00638-201ENST00000555578 FAM227BQ96M60 508 aa16.94■□□□□ 0.3
LINC00638-201ENST00000555578 DIAPH3Q9NSV4 1193 aa16.94■□□□□ 0.3
LINC00638-201ENST00000555578 SGSM2O43147 1006 aa16.93■□□□□ 0.3
LINC00638-201ENST00000555578 HSP90AB3PQ58FF7 597 aa16.93■□□□□ 0.3
LINC00638-201ENST00000555578 SUSD4Q5VX71 490 aa16.93■□□□□ 0.3
LINC00638-201ENST00000555578 TTLL11Q8NHH1 800 aa16.93■□□□□ 0.3
LINC00638-201ENST00000555578 SMARCC1Q92922 1105 aaPredicted RBP16.93■□□□□ 0.3
LINC00638-201ENST00000555578 DNAJC2Q99543 621 aaKnown RBP16.93■□□□□ 0.3
LINC00638-201ENST00000555578 ERVV-1B6SEH8 477 aa16.93■□□□□ 0.3
LINC00638-201ENST00000555578 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
LINC00638-201ENST00000555578 ZNF34Q8IZ26 560 aa16.93■□□□□ 0.3
LINC00638-201ENST00000555578 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
LINC00638-201ENST00000555578 IFIT5Q13325 482 aaKnown RBP16.92■□□□□ 0.3
LINC00638-201ENST00000555578 EVI5LQ96CN4 794 aa16.92■□□□□ 0.3
LINC00638-201ENST00000555578 ITGA6P23229 1130 aa16.92■□□□□ 0.3
LINC00638-201ENST00000555578 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
LINC00638-201ENST00000555578 CSF1RP07333 972 aa16.91■□□□□ 0.3
LINC00638-201ENST00000555578 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
LINC00638-201ENST00000555578 RABEP1Q15276 862 aa16.91■□□□□ 0.3
LINC00638-201ENST00000555578 PTH1RQ03431 593 aa16.91■□□□□ 0.3
LINC00638-201ENST00000555578 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
LINC00638-201ENST00000555578 A0A1B0GUL7 405 aa16.9■□□□□ 0.3
LINC00638-201ENST00000555578 K7ELQ4 463 aaPredicted RBP16.9■□□□□ 0.3
LINC00638-201ENST00000555578 HSP90AA1P07900 732 aaKnown RBP16.9■□□□□ 0.3
LINC00638-201ENST00000555578 CTSWP56202 376 aa16.9■□□□□ 0.3
LINC00638-201ENST00000555578 SLFNL1Q499Z3 407 aa16.9■□□□□ 0.3
LINC00638-201ENST00000555578 BICDL1Q6ZP65 573 aa16.9■□□□□ 0.3
LINC00638-201ENST00000555578 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
LINC00638-201ENST00000555578 SEPT12Q8IYM1 358 aa16.9■□□□□ 0.3
LINC00638-201ENST00000555578 NMIQ13287 307 aaPredicted RBP16.9■□□□□ 0.3
LINC00638-201ENST00000555578 DDX46Q7L014 1031 aaKnown RBP16.9■□□□□ 0.3
LINC00638-201ENST00000555578 PLA2G12BQ9BX93 195 aa16.9■□□□□ 0.3
LINC00638-201ENST00000555578 UPF3BQ9BZI7 483 aaKnown RBP16.9■□□□□ 0.3
LINC00638-201ENST00000555578 NEK4P51957 841 aa16.89■□□□□ 0.29
LINC00638-201ENST00000555578 AMIGO3Q86WK7 504 aa16.89■□□□□ 0.29
LINC00638-201ENST00000555578 LSG1Q9H089 658 aaKnown RBP16.89■□□□□ 0.29
LINC00638-201ENST00000555578 QTRT2Q9H974 415 aaKnown RBP16.89■□□□□ 0.29
LINC00638-201ENST00000555578 CEP126Q9P2H0 1117 aa16.89■□□□□ 0.29
LINC00638-201ENST00000555578 A0A0D9SFI3 127 aa16.89■□□□□ 0.29
LINC00638-201ENST00000555578 ATP5JP18859 108 aa16.89■□□□□ 0.29
LINC00638-201ENST00000555578 ADORA1P30542 326 aa16.89■□□□□ 0.29
LINC00638-201ENST00000555578 LDHAL6AQ6ZMR3 332 aa16.89■□□□□ 0.29
LINC00638-201ENST00000555578 CDHR2Q9BYE9 1310 aa16.88■□□□□ 0.29
LINC00638-201ENST00000555578 KIAA1211Q6ZU35 1233 aa16.88■□□□□ 0.29
LINC00638-201ENST00000555578 PDE8AO60658 829 aa16.87■□□□□ 0.29
LINC00638-201ENST00000555578 RASEFQ8IZ41 740 aa16.87■□□□□ 0.29
LINC00638-201ENST00000555578 HELBQ8NG08 1087 aaPredicted RBP16.87■□□□□ 0.29
LINC00638-201ENST00000555578 ANKRD36CQ5JPF3 1778 aa16.87■□□□□ 0.29
LINC00638-201ENST00000555578 MCCP23508 829 aa16.87■□□□□ 0.29
LINC00638-201ENST00000555578 SEC31BQ9NQW1 1179 aa16.87■□□□□ 0.29
LINC00638-201ENST00000555578 SNRKQ9NRH2 765 aa16.87■□□□□ 0.29
LINC00638-201ENST00000555578 SRP68Q9UHB9 627 aaKnown RBP16.87■□□□□ 0.29
LINC00638-201ENST00000555578 CCNL1Q9UK58 526 aaPredicted RBP16.87■□□□□ 0.29
LINC00638-201ENST00000555578 TRPC5Q9UL62 973 aaPredicted RBP16.87■□□□□ 0.29
LINC00638-201ENST00000555578 SNAP23O00161 211 aa16.86■□□□□ 0.29
LINC00638-201ENST00000555578 GOLIM4O00461 696 aa16.86■□□□□ 0.29
LINC00638-201ENST00000555578 CIAO1O76071 339 aa16.86■□□□□ 0.29
LINC00638-201ENST00000555578 FAM43AQ8N2R8 423 aa16.86■□□□□ 0.29
LINC00638-201ENST00000555578 SEC62Q99442 399 aaKnown RBP16.86■□□□□ 0.29
LINC00638-201ENST00000555578 UTP14AQ9BVJ6 771 aaKnown RBP16.86■□□□□ 0.29
LINC00638-201ENST00000555578 CNNM1Q9NRU3 951 aa16.86■□□□□ 0.29
LINC00638-201ENST00000555578 SH3TC1Q8TE82 1336 aa16.86■□□□□ 0.29
LINC00638-201ENST00000555578 RAD50Q92878 1312 aa16.86■□□□□ 0.29
LINC00638-201ENST00000555578 ANKRD18BA2A2Z9 1011 aa16.86■□□□□ 0.29
LINC00638-201ENST00000555578 HSPA4P34932 840 aa16.86■□□□□ 0.29
LINC00638-201ENST00000555578 METTL24Q5JXM2 366 aa16.86■□□□□ 0.29
LINC00638-201ENST00000555578 ZNF589Q86UQ0 364 aaPredicted RBP16.86■□□□□ 0.29
LINC00638-201ENST00000555578 GNPATO15228 680 aa16.85■□□□□ 0.29
LINC00638-201ENST00000555578 CPA1P15085 419 aa16.85■□□□□ 0.29
LINC00638-201ENST00000555578 CCDC24Q8N4L8 307 aa16.85■□□□□ 0.29
LINC00638-201ENST00000555578 LARP6Q9BRS8 491 aaKnown RBP16.85■□□□□ 0.29
LINC00638-201ENST00000555578 RIPOR2Q9Y4F9 1068 aa16.85■□□□□ 0.29
LINC00638-201ENST00000555578 CCDC129Q6ZRS4 1044 aa16.85■□□□□ 0.29
LINC00638-201ENST00000555578 RUFY2Q8WXA3 655 aa16.85■□□□□ 0.29
LINC00638-201ENST00000555578 XAGE2Q96GT9 111 aa16.85■□□□□ 0.29
LINC00638-201ENST00000555578 HAUS7Q99871 368 aa16.85■□□□□ 0.29
LINC00638-201ENST00000555578 BTAF1O14981 1849 aa16.84■□□□□ 0.29
LINC00638-201ENST00000555578 ST18O60284 1047 aa16.84■□□□□ 0.29
LINC00638-201ENST00000555578 GORABQ5T7V8 394 aa16.84■□□□□ 0.29
LINC00638-201ENST00000555578 PI16Q6UXB8 463 aa16.84■□□□□ 0.29
LINC00638-201ENST00000555578 THSD7AQ9UPZ6 1657 aa16.84■□□□□ 0.29
LINC00638-201ENST00000555578 FKBP4Q02790 459 aaKnown RBP eCLIP16.84■□□□□ 0.29
LINC00638-201ENST00000555578 USPL1Q5W0Q7 1092 aa16.84■□□□□ 0.29
LINC00638-201ENST00000555578 PRPF40BQ6NWY9 871 aaKnown RBP16.84■□□□□ 0.29
LINC00638-201ENST00000555578 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
LINC00638-201ENST00000555578 ZNF609O15014 1411 aa16.83■□□□□ 0.29
LINC00638-201ENST00000555578 PHF14O94880 888 aa16.83■□□□□ 0.28
LINC00638-201ENST00000555578 NTSR2O95665 410 aa16.83■□□□□ 0.28
LINC00638-201ENST00000555578 IFIT1P09914 478 aaKnown RBP16.83■□□□□ 0.28
LINC00638-201ENST00000555578 SCARF1Q14162 830 aa16.83■□□□□ 0.28
LINC00638-201ENST00000555578 COL9A3Q14050 684 aaPredicted RBP16.83■□□□□ 0.28
LINC00638-201ENST00000555578 GPR108Q9NPR9 543 aa16.83■□□□□ 0.28
LINC00638-201ENST00000555578 MYH3P11055 1940 aa16.82■□□□□ 0.28
LINC00638-201ENST00000555578 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
LINC00638-201ENST00000555578 TBC1D9BQ66K14 1250 aa16.82■□□□□ 0.28
LINC00638-201ENST00000555578 ZGPATQ8N5A5 531 aaKnown RBP16.82■□□□□ 0.28
LINC00638-201ENST00000555578 PAG1Q9NWQ8 432 aa16.82■□□□□ 0.28
LINC00638-201ENST00000555578 CHMP5Q9NZZ3 219 aa16.82■□□□□ 0.28
LINC00638-201ENST00000555578 ONECUT3O60422 494 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms