RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 EIF2AK4Q9P2K8 1649 aaKnown RBP9.24□□□□□ -0.93
LINC00643-203ENST00000555518 YEATS2Q9ULM3 1422 aa9.24□□□□□ -0.93
LINC00643-203ENST00000555518 SAMD5Q5TGI4 173 aa9.24□□□□□ -0.93
LINC00643-203ENST00000555518 PRR12Q9ULL5 1215 aa9.24□□□□□ -0.93
LINC00643-203ENST00000555518 BCORL1Q5H9F3 1711 aa9.24□□□□□ -0.93
LINC00643-203ENST00000555518 ACIN1Q9UKV3 1341 aaKnown RBP9.24□□□□□ -0.93
LINC00643-203ENST00000555518 VWDEQ8N2E2 1590 aa9.24□□□□□ -0.93
LINC00643-203ENST00000555518 A2MP01023 1474 aa9.23□□□□□ -0.93
LINC00643-203ENST00000555518 SPATA31C1P0DKV0 1188 aa9.23□□□□□ -0.93
LINC00643-203ENST00000555518 MTFR1Q15390 333 aa9.23□□□□□ -0.93
LINC00643-203ENST00000555518 ZNF468Q5VIY5 522 aaPredicted RBP9.23□□□□□ -0.93
LINC00643-203ENST00000555518 IQGAP3Q86VI3 1631 aa9.23□□□□□ -0.93
LINC00643-203ENST00000555518 PRDM15P57071 1507 aaPredicted RBP9.22□□□□□ -0.93
LINC00643-203ENST00000555518 FAM135AQ9P2D6 1515 aa9.22□□□□□ -0.93
LINC00643-203ENST00000555518 DCDC2BA2VCK2 349 aa9.22□□□□□ -0.93
LINC00643-203ENST00000555518 KHNYNO15037 678 aaKnown RBP9.22□□□□□ -0.93
LINC00643-203ENST00000555518 ZEB1P37275 1124 aaPredicted RBP9.22□□□□□ -0.93
LINC00643-203ENST00000555518 IRF5Q13568 498 aa9.22□□□□□ -0.93
LINC00643-203ENST00000555518 PLPP7Q8NBV4 271 aa9.22□□□□□ -0.93
LINC00643-203ENST00000555518 MPHOSPH9Q99550 1183 aa9.22□□□□□ -0.93
LINC00643-203ENST00000555518 RNF17Q9BXT8 1623 aaKnown RBP9.22□□□□□ -0.93
LINC00643-203ENST00000555518 A6NJY4 79 aa9.21□□□□□ -0.94
LINC00643-203ENST00000555518 BACH1O14867 736 aa9.21□□□□□ -0.94
LINC00643-203ENST00000555518 STAU1O95793 577 aaKnown RBP9.21□□□□□ -0.94
LINC00643-203ENST00000555518 ALAS2P22557 587 aa9.21□□□□□ -0.94
LINC00643-203ENST00000555518 CHRNA4P43681 627 aa9.21□□□□□ -0.94
LINC00643-203ENST00000555518 NUP155O75694 1391 aa9.21□□□□□ -0.94
LINC00643-203ENST00000555518 ANKRD30BQ9BXX2 1392 aa9.21□□□□□ -0.94
LINC00643-203ENST00000555518 REREQ9P2R6 1566 aa9.2□□□□□ -0.94
LINC00643-203ENST00000555518 CD33P20138 364 aa9.2□□□□□ -0.94
LINC00643-203ENST00000555518 SEMA3FQ13275 785 aa9.2□□□□□ -0.94
LINC00643-203ENST00000555518 FCHSD1Q86WN1 690 aa9.2□□□□□ -0.94
LINC00643-203ENST00000555518 MARK1Q9P0L2 795 aa9.2□□□□□ -0.94
LINC00643-203ENST00000555518 GPC6Q9Y625 555 aaPredicted RBP9.2□□□□□ -0.94
LINC00643-203ENST00000555518 ARHGEF40Q8TER5 1519 aa9.2□□□□□ -0.94
LINC00643-203ENST00000555518 SIGLEC1Q9BZZ2 1709 aa9.19□□□□□ -0.94
LINC00643-203ENST00000555518 LZTS3O60299 673 aaPredicted RBP9.19□□□□□ -0.94
LINC00643-203ENST00000555518 GATA4P43694 442 aa9.19□□□□□ -0.94
LINC00643-203ENST00000555518 ZIC5Q96T25 663 aa9.19□□□□□ -0.94
LINC00643-203ENST00000555518 CABP1Q9NZU7 370 aa9.19□□□□□ -0.94
LINC00643-203ENST00000555518 KLF15Q9UIH9 416 aa9.19□□□□□ -0.94
LINC00643-203ENST00000555518 ATP10AO60312 1499 aa9.18□□□□□ -0.94
LINC00643-203ENST00000555518 VAC14Q08AM6 782 aa9.18□□□□□ -0.94
LINC00643-203ENST00000555518 LMTK2Q8IWU2 1503 aa9.18□□□□□ -0.94
LINC00643-203ENST00000555518 ZNF295-AS1Q8N0V1 137 aa9.18□□□□□ -0.94
LINC00643-203ENST00000555518 PLVAPQ9BX97 442 aa9.18□□□□□ -0.94
LINC00643-203ENST00000555518 SERTAD1Q9UHV2 236 aa9.18□□□□□ -0.94
LINC00643-203ENST00000555518 IQSEC3Q9UPP2 1182 aaPredicted RBP9.18□□□□□ -0.94
LINC00643-203ENST00000555518 AGLP35573 1532 aa9.17□□□□□ -0.94
LINC00643-203ENST00000555518 PLA2R1Q13018 1463 aa9.17□□□□□ -0.94
LINC00643-203ENST00000555518 ELOA3CA0A087WX78 387 aaPredicted RBP9.17□□□□□ -0.94
LINC00643-203ENST00000555518 ELOA3DA6NLF2 546 aaPredicted RBP9.17□□□□□ -0.94
LINC00643-203ENST00000555518 ELOA3BQ3SY89 546 aa9.17□□□□□ -0.94
LINC00643-203ENST00000555518 PRRT3Q5FWE3 981 aa9.17□□□□□ -0.94
LINC00643-203ENST00000555518 BICDL1Q6ZP65 573 aa9.17□□□□□ -0.94
LINC00643-203ENST00000555518 ELOA3Q8NG57 546 aa9.17□□□□□ -0.94
LINC00643-203ENST00000555518 SIN3AQ96ST3 1273 aa9.17□□□□□ -0.94
LINC00643-203ENST00000555518 TMEM229AB2RXF0 380 aa9.16□□□□□ -0.94
LINC00643-203ENST00000555518 EFSO43281 561 aa9.16□□□□□ -0.94
LINC00643-203ENST00000555518 PCBP4P57723 403 aaKnown RBP9.16□□□□□ -0.94
LINC00643-203ENST00000555518 SEMA6BQ9H3T3 888 aa9.16□□□□□ -0.94
LINC00643-203ENST00000555518 TET3O43151 1660 aa9.16□□□□□ -0.94
LINC00643-203ENST00000555518 KIF3BO15066 747 aa9.15□□□□□ -0.94
LINC00643-203ENST00000555518 TMEM132AQ24JP5 1023 aa9.15□□□□□ -0.94
LINC00643-203ENST00000555518 EML3Q32P44 896 aa9.15□□□□□ -0.94
LINC00643-203ENST00000555518 TRIM11Q96F44 468 aa9.15□□□□□ -0.94
LINC00643-203ENST00000555518 E9PCH4 1651 aa9.15□□□□□ -0.94
LINC00643-203ENST00000555518 ABCC3O15438 1527 aa9.15□□□□□ -0.95
LINC00643-203ENST00000555518 RPRD2Q5VT52 1461 aaKnown RBP9.15□□□□□ -0.95
LINC00643-203ENST00000555518 SIN3BO75182 1162 aa9.14□□□□□ -0.95
LINC00643-203ENST00000555518 NEUROD1Q13562 356 aa9.14□□□□□ -0.95
LINC00643-203ENST00000555518 DOC2BQ14184 412 aa9.14□□□□□ -0.95
LINC00643-203ENST00000555518 NACC1Q96RE7 527 aa9.14□□□□□ -0.95
LINC00643-203ENST00000555518 NEUROD4Q9HD90 331 aa9.14□□□□□ -0.95
LINC00643-203ENST00000555518 EFCAB6Q5THR3 1501 aa9.14□□□□□ -0.95
LINC00643-203ENST00000555518 CEP152O94986 1710 aa9.14□□□□□ -0.95
LINC00643-203ENST00000555518 PTPRTO14522 1441 aa9.14□□□□□ -0.95
LINC00643-203ENST00000555518 ADARB2-AS1A8MUL3 147 aa9.13□□□□□ -0.95
LINC00643-203ENST00000555518 APBA3O96018 575 aa9.13□□□□□ -0.95
LINC00643-203ENST00000555518 ABL2P42684 1182 aa9.13□□□□□ -0.95
LINC00643-203ENST00000555518 GDPD2Q9HCC8 539 aa9.13□□□□□ -0.95
LINC00643-203ENST00000555518 PRDM6Q9NQX0 595 aa9.13□□□□□ -0.95
LINC00643-203ENST00000555518 NOD1Q9Y239 953 aa9.13□□□□□ -0.95
LINC00643-203ENST00000555518 ZMYM1Q5SVZ6 1142 aa9.12□□□□□ -0.95
LINC00643-203ENST00000555518 SYT9Q86SS6 491 aa9.12□□□□□ -0.95
LINC00643-203ENST00000555518 NFATC2IPQ8NCF5 419 aa9.12□□□□□ -0.95
LINC00643-203ENST00000555518 SCHIP1Q9P0W5 487 aaPredicted RBP9.12□□□□□ -0.95
LINC00643-203ENST00000555518 HCN2Q9UL51 889 aa9.12□□□□□ -0.95
LINC00643-203ENST00000555518 PCDHGA11Q9Y5H2 935 aa9.12□□□□□ -0.95
LINC00643-203ENST00000555518 ZC3H13Q5T200 1668 aaKnown RBP9.11□□□□□ -0.95
LINC00643-203ENST00000555518 TEAD4Q15561 434 aa9.11□□□□□ -0.95
LINC00643-203ENST00000555518 KRTAP4-8Q9BYQ9 185 aa9.11□□□□□ -0.95
LINC00643-203ENST00000555518 TIMELESSQ9UNS1 1208 aa9.11□□□□□ -0.95
LINC00643-203ENST00000555518 KANK1Q14678 1352 aa9.11□□□□□ -0.95
LINC00643-203ENST00000555518 TRPM2O94759 1503 aa9.1□□□□□ -0.95
LINC00643-203ENST00000555518 CAMSAP1Q5T5Y3 1602 aa9.1□□□□□ -0.95
LINC00643-203ENST00000555518 L3MBTL2Q969R5 705 aa9.1□□□□□ -0.95
LINC00643-203ENST00000555518 MDFIQ99750 246 aa9.1□□□□□ -0.95
LINC00643-203ENST00000555518 NPATQ14207 1427 aa9.1□□□□□ -0.95
LINC00643-203ENST00000555518 SPHKAPQ2M3C7 1700 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms