RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 AFDNP55196 1824 aaKnown RBP11.85□□□□□ -0.51
RPGRIP1-208ENST00000555489 A0A087WZG4 1122 aa11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 FIBPO43427 364 aa11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 UBE3BQ7Z3V4 1068 aa11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 DBNLQ9UJU6 430 aaKnown RBP11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 VPS37CA5D8V6 355 aaPredicted RBP11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 TAF5LO75529 589 aa11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 KRT85P78386 507 aa11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 ST3GAL1Q11201 340 aa11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 LARP1BQ659C4 914 aaKnown RBP11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 U3KPZ7 1027 aaPredicted RBP11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 GLI3P10071 1580 aa11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 ELP1O95163 1332 aa11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 SPATA31A3Q5VYP0 1347 aa11.84□□□□□ -0.51
RPGRIP1-208ENST00000555489 DNM1Q05193 864 aaKnown RBP11.83□□□□□ -0.52
RPGRIP1-208ENST00000555489 TFCP2Q12800 502 aa11.83□□□□□ -0.52
RPGRIP1-208ENST00000555489 TCHHQ07283 1943 aa11.83□□□□□ -0.52
RPGRIP1-208ENST00000555489 CASP7P55210 303 aa11.83□□□□□ -0.52
RPGRIP1-208ENST00000555489 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
RPGRIP1-208ENST00000555489 HAUS7Q99871 368 aa11.83□□□□□ -0.52
RPGRIP1-208ENST00000555489 GPR108Q9NPR9 543 aa11.83□□□□□ -0.52
RPGRIP1-208ENST00000555489 PCDH11XQ9BZA7 1347 aa11.82□□□□□ -0.52
RPGRIP1-208ENST00000555489 PCDH11YQ9BZA8 1340 aa11.82□□□□□ -0.52
RPGRIP1-208ENST00000555489 PTMAP06454 111 aaKnown RBP11.82□□□□□ -0.52
RPGRIP1-208ENST00000555489 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.82□□□□□ -0.52
RPGRIP1-208ENST00000555489 HMGB1P09429 215 aaKnown RBP11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 TOB2Q14106 344 aaPredicted RBP11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 MCMDC2Q4G0Z9 681 aa11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 NECAB1Q8N987 351 aa11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 SCAND2PQ9GZW5 306 aaPredicted RBP11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 SH3TC1Q8TE82 1336 aa11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 PALLDQ8WX93 1383 aa11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 H7C1W4 665 aa11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 CHRNA2Q15822 529 aa11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 KBTBD3Q8NAB2 608 aa11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 NEK1Q96PY6 1258 aa11.81□□□□□ -0.52
RPGRIP1-208ENST00000555489 ERVV-2B6SEH9 535 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 ATP5J2-PTCD1G3V325 749 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 PTCD1O75127 700 aaKnown RBP11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 LMBR1LQ6UX01 489 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 CABLES1Q8TDN4 633 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 DDX17Q92841 729 aaKnown RBP11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 CWC25Q9NXE8 425 aaPredicted RBP11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 ZNF609O15014 1411 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 UBR2Q8IWV8 1755 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 IL15P40933 162 aaPredicted RBP11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 CDC37L1Q7L3B6 337 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 DDX54Q8TDD1 881 aaKnown RBP11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 DNAJC2Q99543 621 aaKnown RBP11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 DBNDD2Q9BQY9 259 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 FUCA2Q9BTY2 467 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 WDR17Q8IZU2 1322 aa11.8□□□□□ -0.52
RPGRIP1-208ENST00000555489 CCDC192P0DO97 292 aa11.79□□□□□ -0.52
RPGRIP1-208ENST00000555489 HCLS1P14317 486 aaPredicted RBP11.79□□□□□ -0.52
RPGRIP1-208ENST00000555489 PIP4K2AP48426 406 aaPredicted RBP11.79□□□□□ -0.52
RPGRIP1-208ENST00000555489 FOXO4P98177 505 aa11.79□□□□□ -0.52
RPGRIP1-208ENST00000555489 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
RPGRIP1-208ENST00000555489 GTF3C6Q969F1 213 aa11.79□□□□□ -0.52
RPGRIP1-208ENST00000555489 EDC3Q96F86 508 aaKnown RBP11.79□□□□□ -0.52
RPGRIP1-208ENST00000555489 HELLSQ9NRZ9 838 aa11.79□□□□□ -0.52
RPGRIP1-208ENST00000555489 STRCP1A6NGW2 1772 aa11.79□□□□□ -0.52
RPGRIP1-208ENST00000555489 ZCRB1Q8TBF4 217 aaKnown RBP11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 CHMP4CQ96CF2 233 aa11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 DSCC1Q9BVC3 393 aa11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 NUP188Q5SRE5 1749 aa11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 SPEF2Q9C093 1822 aa11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 PAPPAQ13219 1627 aa11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 RRP9O43818 475 aaKnown RBP11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 KDM4AO75164 1064 aa11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 CIAO1O76071 339 aa11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 KIAA2012Q0VF49 1180 aa11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 NKX1-1Q15270 411 aaPredicted RBP11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 LLPHQ9BRT6 129 aaKnown RBP11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 USP25Q9UHP3 1055 aa11.78□□□□□ -0.52
RPGRIP1-208ENST00000555489 GOLGA6L4A6NEF3 574 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 NBPF26B4DH59 902 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 CYP21A2P08686 494 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 LRRFIP1Q32MZ4 808 aaKnown RBP11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 NBPF14Q5TI25 921 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 NBPF10Q6P3W6 841 aaKnown RBP11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 DDX46Q7L014 1031 aaKnown RBP11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 ATG9AQ7Z3C6 839 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 NBPF15Q8N660 670 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 JARID2Q92833 1246 aaPredicted RBP11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 TCEANC2Q96MN5 208 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 ZSCAN16Q9H4T2 348 aaPredicted RBP11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 PAG1Q9NWQ8 432 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 CHMP3Q9Y3E7 222 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 KIF3AQ9Y496 699 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 TAF6LQ9Y6J9 622 aa11.77□□□□□ -0.52
RPGRIP1-208ENST00000555489 KCPQ6ZWJ8 1503 aa11.77□□□□□ -0.53
RPGRIP1-208ENST00000555489 ADCY5O95622 1261 aa11.77□□□□□ -0.53
RPGRIP1-208ENST00000555489 KCNA4P22459 653 aa11.77□□□□□ -0.53
RPGRIP1-208ENST00000555489 MAP3K11Q16584 847 aa11.77□□□□□ -0.53
RPGRIP1-208ENST00000555489 GIMAP6Q6P9H5 292 aa11.77□□□□□ -0.53
RPGRIP1-208ENST00000555489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.77□□□□□ -0.53
RPGRIP1-208ENST00000555489 SPATA32Q96LK8 384 aa11.77□□□□□ -0.53
RPGRIP1-208ENST00000555489 NUP62CLQ9H1M0 184 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms