RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.49■■■□□ 2.15
STRN3-207ENST00000555358 KLHDC4Q8TBB5 520 aa28.49■■■□□ 2.15
STRN3-207ENST00000555358 HSP90AB4PQ58FF6 505 aa28.48■■■□□ 2.15
STRN3-207ENST00000555358 KIF6Q6ZMV9 814 aa28.48■■■□□ 2.15
STRN3-207ENST00000555358 H7C1W4 665 aa28.47■■■□□ 2.15
STRN3-207ENST00000555358 AFF2P51816 1311 aa28.47■■■□□ 2.15
STRN3-207ENST00000555358 ATP6V1AP38606 617 aa28.47■■■□□ 2.15
STRN3-207ENST00000555358 LOC102724428A0A0B4J2F2 783 aa28.46■■■□□ 2.15
STRN3-207ENST00000555358 SIK1P57059 783 aa28.46■■■□□ 2.15
STRN3-207ENST00000555358 TCIRG1Q13488 830 aa28.46■■■□□ 2.15
STRN3-207ENST00000555358 CCDC191Q8NCU4 936 aa28.46■■■□□ 2.15
STRN3-207ENST00000555358 PALLDQ8WX93 1383 aa28.46■■■□□ 2.15
STRN3-207ENST00000555358 RAD50Q92878 1312 aa28.46■■■□□ 2.15
STRN3-207ENST00000555358 THSD7AQ9UPZ6 1657 aa28.46■■■□□ 2.15
STRN3-207ENST00000555358 ISCA1Q9BUE6 129 aa28.46■■■□□ 2.15
STRN3-207ENST00000555358 HLFQ16534 295 aa28.45■■■□□ 2.15
STRN3-207ENST00000555358 SIL1Q9H173 461 aa28.45■■■□□ 2.15
STRN3-207ENST00000555358 ZKSCAN5Q9Y2L8 839 aa28.45■■■□□ 2.15
STRN3-207ENST00000555358 COL15A1P39059 1388 aa28.45■■■□□ 2.14
STRN3-207ENST00000555358 RPAP1Q9BWH6 1393 aaPredicted RBP28.45■■■□□ 2.14
STRN3-207ENST00000555358 MAP3K15Q6ZN16 1313 aa28.45■■■□□ 2.14
STRN3-207ENST00000555358 SGSM2O43147 1006 aa28.45■■■□□ 2.14
STRN3-207ENST00000555358 ITPK1Q13572 414 aa28.45■■■□□ 2.14
STRN3-207ENST00000555358 RABL6Q3YEC7 729 aaPredicted RBP28.45■■■□□ 2.14
STRN3-207ENST00000555358 PTF1AQ7RTS3 328 aa28.45■■■□□ 2.14
STRN3-207ENST00000555358 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.45■■■□□ 2.14
STRN3-207ENST00000555358 WDR33Q9C0J8 1336 aaKnown RBP28.44■■■□□ 2.14
STRN3-207ENST00000555358 MAP4K4O95819 1239 aaPredicted RBP28.44■■■□□ 2.14
STRN3-207ENST00000555358 TERF1P54274 439 aa28.44■■■□□ 2.14
STRN3-207ENST00000555358 FAM182BQ5T319 152 aa28.44■■■□□ 2.14
STRN3-207ENST00000555358 MYH14Q7Z406 1995 aaKnown RBP28.43■■■□□ 2.14
STRN3-207ENST00000555358 GADD45BO75293 160 aaPredicted RBP28.43■■■□□ 2.14
STRN3-207ENST00000555358 GJD4Q96KN9 370 aaPredicted RBP28.43■■■□□ 2.14
STRN3-207ENST00000555358 TSPY26PQ9H489 355 aa28.43■■■□□ 2.14
STRN3-207ENST00000555358 SASH1O94885 1247 aa28.42■■■□□ 2.14
STRN3-207ENST00000555358 FOXO4P98177 505 aa28.42■■■□□ 2.14
STRN3-207ENST00000555358 INTS5Q6P9B9 1019 aaKnown RBP28.42■■■□□ 2.14
STRN3-207ENST00000555358 RNF214Q8ND24 703 aa28.42■■■□□ 2.14
STRN3-207ENST00000555358 SYAP1Q96A49 352 aaPredicted RBP28.42■■■□□ 2.14
STRN3-207ENST00000555358 RFX5P48382 616 aaPredicted RBP28.42■■■□□ 2.14
STRN3-207ENST00000555358 TTC14Q96N46 770 aa28.42■■■□□ 2.14
STRN3-207ENST00000555358 LSG1Q9H089 658 aaKnown RBP28.42■■■□□ 2.14
STRN3-207ENST00000555358 GDPD2Q9HCC8 539 aa28.42■■■□□ 2.14
STRN3-207ENST00000555358 SNX14Q9Y5W7 946 aa28.42■■■□□ 2.14
STRN3-207ENST00000555358 MCM5P33992 734 aa28.41■■■□□ 2.14
STRN3-207ENST00000555358 IL6STP40189 918 aaPredicted RBP28.41■■■□□ 2.14
STRN3-207ENST00000555358 G3BP1Q13283 466 aaKnown RBP eCLIP28.41■■■□□ 2.14
STRN3-207ENST00000555358 LMBR1LQ6UX01 489 aa28.41■■■□□ 2.14
STRN3-207ENST00000555358 GIGYF2Q6Y7W6 1299 aaKnown RBP28.41■■■□□ 2.14
STRN3-207ENST00000555358 USP48Q86UV5 1035 aa28.41■■■□□ 2.14
STRN3-207ENST00000555358 TCHHQ07283 1943 aa28.41■■■□□ 2.14
STRN3-207ENST00000555358 CRKLP46109 303 aaKnown RBP28.41■■■□□ 2.14
STRN3-207ENST00000555358 CCDC39Q9UFE4 941 aa28.41■■■□□ 2.14
STRN3-207ENST00000555358 TBC1D2BQ9UPU7 963 aa28.41■■■□□ 2.14
STRN3-207ENST00000555358 NUP98P52948 1817 aa28.4■■■□□ 2.14
STRN3-207ENST00000555358 ERC1Q8IUD2 1116 aa28.4■■■□□ 2.14
STRN3-207ENST00000555358 TMEM87AQ8NBN3 555 aa28.4■■■□□ 2.14
STRN3-207ENST00000555358 FOXD4L6Q3SYB3 417 aaPredicted RBP28.39■■■□□ 2.14
STRN3-207ENST00000555358 FOXD4L3Q6VB84 417 aaPredicted RBP28.39■■■□□ 2.14
STRN3-207ENST00000555358 PTPN12Q05209 780 aaKnown RBP28.39■■■□□ 2.14
STRN3-207ENST00000555358 CCDC87Q9NVE4 849 aa28.39■■■□□ 2.14
STRN3-207ENST00000555358 GPTP24298 496 aa28.38■■■□□ 2.13
STRN3-207ENST00000555358 DZIP3Q86Y13 1208 aaKnown RBP28.38■■■□□ 2.13
STRN3-207ENST00000555358 CLASRPQ8N2M8 674 aaKnown RBP28.38■■■□□ 2.13
STRN3-207ENST00000555358 SMARCC1Q92922 1105 aaPredicted RBP28.38■■■□□ 2.13
STRN3-207ENST00000555358 TRIM28Q13263 835 aaKnown RBP28.38■■■□□ 2.13
STRN3-207ENST00000555358 RASEFQ8IZ41 740 aa28.38■■■□□ 2.13
STRN3-207ENST00000555358 CNTROBQ8N137 903 aa28.38■■■□□ 2.13
STRN3-207ENST00000555358 CHMP3Q9Y3E7 222 aa28.38■■■□□ 2.13
STRN3-207ENST00000555358 USP42Q9H9J4 1324 aaKnown RBP28.38■■■□□ 2.13
STRN3-207ENST00000555358 COPRSQ9NQ92 184 aa28.37■■■□□ 2.13
STRN3-207ENST00000555358 ANKRD36CQ5JPF3 1778 aa28.37■■■□□ 2.13
STRN3-207ENST00000555358 EIF5P55010 431 aaKnown RBP28.37■■■□□ 2.13
STRN3-207ENST00000555358 CICQ96RK0 1608 aaPredicted RBP28.36■■■□□ 2.13
STRN3-207ENST00000555358 KCNQ4P56696 695 aa28.36■■■□□ 2.13
STRN3-207ENST00000555358 PHF14O94880 888 aa28.35■■■□□ 2.13
STRN3-207ENST00000555358 AK2P54819 239 aa28.35■■■□□ 2.13
STRN3-207ENST00000555358 FAM89AQ96GI7 184 aa28.35■■■□□ 2.13
STRN3-207ENST00000555358 ATRNO75882 1429 aa28.35■■■□□ 2.13
STRN3-207ENST00000555358 RREB1Q92766 1687 aa28.35■■■□□ 2.13
STRN3-207ENST00000555358 RUFY3Q7L099 469 aa28.34■■■□□ 2.13
STRN3-207ENST00000555358 AACSQ86V21 672 aa28.34■■■□□ 2.13
STRN3-207ENST00000555358 SYNE4Q8N205 404 aa28.34■■■□□ 2.13
STRN3-207ENST00000555358 COL5A3P25940 1745 aaPredicted RBP28.34■■■□□ 2.13
STRN3-207ENST00000555358 EAF2Q96CJ1 260 aaPredicted RBP28.34■■■□□ 2.13
STRN3-207ENST00000555358 R3HCC1Q9Y3T6 440 aaKnown RBP28.34■■■□□ 2.13
STRN3-207ENST00000555358 BTAF1O14981 1849 aa28.34■■■□□ 2.13
STRN3-207ENST00000555358 NLRP10Q86W26 655 aa28.33■■■□□ 2.13
STRN3-207ENST00000555358 TRPC5Q9UL62 973 aaPredicted RBP28.33■■■□□ 2.13
STRN3-207ENST00000555358 ZSCAN22P10073 491 aaPredicted RBP28.33■■■□□ 2.12
STRN3-207ENST00000555358 GLIPR1L2Q4G1C9 344 aa28.33■■■□□ 2.12
STRN3-207ENST00000555358 LIMCH1Q9UPQ0 1083 aa28.33■■■□□ 2.12
STRN3-207ENST00000555358 TTC41PQ6P2S7 1318 aa28.32■■■□□ 2.12
STRN3-207ENST00000555358 ERVV-1B6SEH8 477 aa28.31■■■□□ 2.12
STRN3-207ENST00000555358 PCCAP05165 728 aaPredicted RBP28.31■■■□□ 2.12
STRN3-207ENST00000555358 IFIT2P09913 472 aaKnown RBP28.31■■■□□ 2.12
STRN3-207ENST00000555358 CWC27Q6UX04 472 aaKnown RBP28.31■■■□□ 2.12
STRN3-207ENST00000555358 CNPY2Q9Y2B0 182 aa28.31■■■□□ 2.12
STRN3-207ENST00000555358 HSP90AB3PQ58FF7 597 aa28.31■■■□□ 2.12
STRN3-207ENST00000555358 ZBTB38Q8NAP3 1195 aaPredicted RBP28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms