RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 GRAPQ13588 217 aa25.94■■□□□ 1.74
FOXN3-209ENST00000555353 GRAPLQ8TC17 118 aaPredicted RBP25.94■■□□□ 1.74
FOXN3-209ENST00000555353 API5Q9BZZ5 524 aaKnown RBP25.94■■□□□ 1.74
FOXN3-209ENST00000555353 TMX4Q9H1E5 349 aaPredicted RBP25.94■■□□□ 1.74
FOXN3-209ENST00000555353 C9orf78Q9NZ63 289 aaPredicted RBP25.94■■□□□ 1.74
FOXN3-209ENST00000555353 CCDC88AQ3V6T2 1871 aa25.93■■□□□ 1.74
FOXN3-209ENST00000555353 BBOX1O75936 387 aa25.93■■□□□ 1.74
FOXN3-209ENST00000555353 NFKBIEO00221 500 aa25.92■■□□□ 1.74
FOXN3-209ENST00000555353 GRM8O00222 908 aa25.92■■□□□ 1.74
FOXN3-209ENST00000555353 BCAR3O75815 825 aa25.92■■□□□ 1.74
FOXN3-209ENST00000555353 CTSWP56202 376 aa25.92■■□□□ 1.74
FOXN3-209ENST00000555353 CC2D2BQ6DHV5 1058 aa25.92■■□□□ 1.74
FOXN3-209ENST00000555353 OLFM4Q6UX06 510 aa25.92■■□□□ 1.74
FOXN3-209ENST00000555353 RTKN2Q8IZC4 609 aa25.92■■□□□ 1.74
FOXN3-209ENST00000555353 TAOK3Q9H2K8 898 aa25.92■■□□□ 1.74
FOXN3-209ENST00000555353 CASP7P55210 303 aa25.91■■□□□ 1.74
FOXN3-209ENST00000555353 IPO8O15397 1037 aaKnown RBP25.9■■□□□ 1.74
FOXN3-209ENST00000555353 ARHGAP45Q92619 1136 aa25.9■■□□□ 1.74
FOXN3-209ENST00000555353 CCDC85AQ96PX6 553 aaPredicted RBP25.9■■□□□ 1.74
FOXN3-209ENST00000555353 LMNB1P20700 586 aa25.9■■□□□ 1.74
FOXN3-209ENST00000555353 C9orf131Q5VYM1 1079 aa25.9■■□□□ 1.74
FOXN3-209ENST00000555353 FRAT1Q92837 279 aaPredicted RBP25.9■■□□□ 1.74
FOXN3-209ENST00000555353 PLA2G12BQ9BX93 195 aa25.9■■□□□ 1.74
FOXN3-209ENST00000555353 RNF181Q9P0P0 153 aa25.9■■□□□ 1.74
FOXN3-209ENST00000555353 ATP6V0A2Q9Y487 856 aa25.9■■□□□ 1.74
FOXN3-209ENST00000555353 GRIPAP1Q4V328 841 aa25.89■■□□□ 1.73
FOXN3-209ENST00000555353 TMC4Q7Z404 712 aa25.89■■□□□ 1.73
FOXN3-209ENST00000555353 TTLL11Q8NHH1 800 aa25.89■■□□□ 1.73
FOXN3-209ENST00000555353 LTBP3Q9NS15 1303 aa25.89■■□□□ 1.73
FOXN3-209ENST00000555353 CELF1Q92879 486 aaKnown RBP25.88■■□□□ 1.73
FOXN3-209ENST00000555353 CCT4P50991 539 aaKnown RBP25.87■■□□□ 1.73
FOXN3-209ENST00000555353 SEC31BQ9NQW1 1179 aa25.87■■□□□ 1.73
FOXN3-209ENST00000555353 RPS8P62241 208 aaKnown RBP25.86■■□□□ 1.73
FOXN3-209ENST00000555353 FKBP4Q02790 459 aaKnown RBP eCLIP25.86■■□□□ 1.73
FOXN3-209ENST00000555353 SP8Q8IXZ3 490 aa25.86■■□□□ 1.73
FOXN3-209ENST00000555353 GREM2Q9H772 168 aa25.86■■□□□ 1.73
FOXN3-209ENST00000555353 ATF7IPQ6VMQ6 1270 aa25.85■■□□□ 1.73
FOXN3-209ENST00000555353 CDC5LQ99459 802 aaKnown RBP25.85■■□□□ 1.73
FOXN3-209ENST00000555353 DICER1Q9UPY3 1922 aaKnown RBP25.84■■□□□ 1.73
FOXN3-209ENST00000555353 NBPF7P0C2Y1 421 aaPredicted RBP25.84■■□□□ 1.73
FOXN3-209ENST00000555353 RTL9Q8NET4 1388 aa25.84■■□□□ 1.73
FOXN3-209ENST00000555353 TRIM27P14373 513 aa25.83■■□□□ 1.73
FOXN3-209ENST00000555353 PRELPP51888 382 aa25.83■■□□□ 1.73
FOXN3-209ENST00000555353 ZKSCAN2Q63HK3 967 aa25.83■■□□□ 1.73
FOXN3-209ENST00000555353 SLC51AQ86UW1 340 aa25.83■■□□□ 1.73
FOXN3-209ENST00000555353 ANKRD18AQ8IVF6 992 aa25.83■■□□□ 1.73
FOXN3-209ENST00000555353 PSMD1Q99460 953 aa25.83■■□□□ 1.73
FOXN3-209ENST00000555353 UTYO14607 1347 aa25.83■■□□□ 1.73
FOXN3-209ENST00000555353 SNED1Q8TER0 1413 aa25.83■■□□□ 1.73
FOXN3-209ENST00000555353 COL4A1P02462 1669 aa25.83■■□□□ 1.72
FOXN3-209ENST00000555353 LRRC37AA6NMS7 1700 aa25.82■■□□□ 1.72
FOXN3-209ENST00000555353 CSF1RP07333 972 aa25.82■■□□□ 1.72
FOXN3-209ENST00000555353 FOXO4P98177 505 aa25.82■■□□□ 1.72
FOXN3-209ENST00000555353 FAM161AQ3B820 660 aa25.82■■□□□ 1.72
FOXN3-209ENST00000555353 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.82■■□□□ 1.72
FOXN3-209ENST00000555353 USP44Q9H0E7 712 aa25.82■■□□□ 1.72
FOXN3-209ENST00000555353 ZNF277Q9NRM2 450 aaPredicted RBP25.82■■□□□ 1.72
FOXN3-209ENST00000555353 CHMP3Q9Y3E7 222 aa25.82■■□□□ 1.72
FOXN3-209ENST00000555353 DPP8Q6V1X1 898 aaPredicted RBP25.81■■□□□ 1.72
FOXN3-209ENST00000555353 MPNDQ8N594 471 aa25.81■■□□□ 1.72
FOXN3-209ENST00000555353 TIAM2Q8IVF5 1701 aa25.81■■□□□ 1.72
FOXN3-209ENST00000555353 SPEF2Q9C093 1822 aa25.81■■□□□ 1.72
FOXN3-209ENST00000555353 ITGA6P23229 1130 aa25.8■■□□□ 1.72
FOXN3-209ENST00000555353 ZNF784Q8NCA9 323 aaPredicted RBP25.8■■□□□ 1.72
FOXN3-209ENST00000555353 SUCLG2Q96I99 432 aa25.8■■□□□ 1.72
FOXN3-209ENST00000555353 ZC3H4Q9UPT8 1303 aaKnown RBP25.79■■□□□ 1.72
FOXN3-209ENST00000555353 LMBR1LQ6UX01 489 aa25.79■■□□□ 1.72
FOXN3-209ENST00000555353 CLUAP1Q96AJ1 413 aa25.79■■□□□ 1.72
FOXN3-209ENST00000555353 SUPT16HQ9Y5B9 1047 aaKnown RBP25.79■■□□□ 1.72
FOXN3-209ENST00000555353 IARSP41252 1262 aaKnown RBP25.78■■□□□ 1.72
FOXN3-209ENST00000555353 EPHA10Q5JZY3 1008 aa25.78■■□□□ 1.72
FOXN3-209ENST00000555353 INTS3Q68E01 1043 aaKnown RBP25.78■■□□□ 1.72
FOXN3-209ENST00000555353 SUPT20HQ8NEM7 779 aa25.78■■□□□ 1.72
FOXN3-209ENST00000555353 ANKRD18BA2A2Z9 1011 aa25.78■■□□□ 1.72
FOXN3-209ENST00000555353 IGHMBP2P38935 993 aaKnown RBP25.78■■□□□ 1.72
FOXN3-209ENST00000555353 IFIT5Q13325 482 aaKnown RBP25.78■■□□□ 1.72
FOXN3-209ENST00000555353 NSFL1CQ9UNZ2 370 aaKnown RBP25.78■■□□□ 1.72
FOXN3-209ENST00000555353 UBTFL1P0CB47 393 aaPredicted RBP25.76■■□□□ 1.71
FOXN3-209ENST00000555353 FTSJ3Q8IY81 847 aaKnown RBP25.76■■□□□ 1.71
FOXN3-209ENST00000555353 ZNF526Q8TF50 670 aaPredicted RBP25.76■■□□□ 1.71
FOXN3-209ENST00000555353 TNNQ9UQP3 1299 aa25.76■■□□□ 1.71
FOXN3-209ENST00000555353 CCDC57Q2TAC2 916 aa25.75■■□□□ 1.71
FOXN3-209ENST00000555353 KAZALD1Q96I82 304 aa25.75■■□□□ 1.71
FOXN3-209ENST00000555353 MPHOSPH8Q99549 860 aa25.75■■□□□ 1.71
FOXN3-209ENST00000555353 RTFDC1Q9BY42 306 aaPredicted RBP25.75■■□□□ 1.71
FOXN3-209ENST00000555353 BICC1Q9H694 974 aaKnown RBP25.75■■□□□ 1.71
FOXN3-209ENST00000555353 BSDC1Q9NW68 430 aaPredicted RBP25.75■■□□□ 1.71
FOXN3-209ENST00000555353 ANKIB1Q9P2G1 1089 aa25.75■■□□□ 1.71
FOXN3-209ENST00000555353 HDAC5Q9UQL6 1122 aa25.74■■□□□ 1.71
FOXN3-209ENST00000555353 RRP1P56182 461 aaKnown RBP25.73■■□□□ 1.71
FOXN3-209ENST00000555353 GPSM2P81274 684 aa25.73■■□□□ 1.71
FOXN3-209ENST00000555353 TAF7LQ5H9L4 462 aa25.73■■□□□ 1.71
FOXN3-209ENST00000555353 LARGE2Q8N3Y3 721 aa25.73■■□□□ 1.71
FOXN3-209ENST00000555353 JDP2Q8WYK2 163 aa25.73■■□□□ 1.71
FOXN3-209ENST00000555353 PPIP5K2O43314 1243 aa25.73■■□□□ 1.71
FOXN3-209ENST00000555353 VPS33BQ9H267 617 aa25.73■■□□□ 1.71
FOXN3-209ENST00000555353 GPBP1L1Q9HC44 474 aaPredicted RBP25.73■■□□□ 1.71
FOXN3-209ENST00000555353 C6orf229H3BNL8 230 aa25.72■■□□□ 1.71
FOXN3-209ENST00000555353 RABL6Q3YEC7 729 aaPredicted RBP25.72■■□□□ 1.71
FOXN3-209ENST00000555353 DZIP1LQ8IYY4 767 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms