RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
CHD8-208ENST00000555301 ALDH1B1P30837 517 aa17.9■□□□□ 0.46
CHD8-208ENST00000555301 DDX46Q7L014 1031 aaKnown RBP17.9■□□□□ 0.46
CHD8-208ENST00000555301 NLGN2Q8NFZ4 835 aa17.9■□□□□ 0.46
CHD8-208ENST00000555301 CNKSR1Q969H4 720 aa17.9■□□□□ 0.46
CHD8-208ENST00000555301 ZNF622Q969S3 477 aaKnown RBP eCLIP17.9■□□□□ 0.461e-7■□□□□ 9.8
CHD8-208ENST00000555301 LRRFIP2Q9Y608 721 aaKnown RBP17.9■□□□□ 0.46
CHD8-208ENST00000555301 RABL6Q3YEC7 729 aaPredicted RBP17.89■□□□□ 0.45
CHD8-208ENST00000555301 EPHA10Q5JZY3 1008 aa17.89■□□□□ 0.45
CHD8-208ENST00000555301 LMBR1LQ6UX01 489 aa17.89■□□□□ 0.45
CHD8-208ENST00000555301 CRAMP1Q96RY5 1269 aa17.89■□□□□ 0.45
CHD8-208ENST00000555301 BICC1Q9H694 974 aaKnown RBP17.89■□□□□ 0.45
CHD8-208ENST00000555301 PIM2Q9P1W9 311 aa17.89■□□□□ 0.45
CHD8-208ENST00000555301 RTL9Q8NET4 1388 aa17.89■□□□□ 0.45
CHD8-208ENST00000555301 KCNA3P22001 575 aa17.88■□□□□ 0.45
CHD8-208ENST00000555301 ZBTB40Q9NUA8 1239 aa17.88■□□□□ 0.45
CHD8-208ENST00000555301 KIF13BQ9NQT8 1826 aa17.88■□□□□ 0.45
CHD8-208ENST00000555301 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
CHD8-208ENST00000555301 TTLL6Q8N841 843 aa17.87■□□□□ 0.45
CHD8-208ENST00000555301 ANKRD44Q8N8A2 993 aa17.87■□□□□ 0.45
CHD8-208ENST00000555301 CCDC85AQ96PX6 553 aaPredicted RBP17.87■□□□□ 0.45
CHD8-208ENST00000555301 CRBNQ96SW2 442 aa17.87■□□□□ 0.45
CHD8-208ENST00000555301 GREM2Q9H772 168 aa17.87■□□□□ 0.45
CHD8-208ENST00000555301 CHMP3Q9Y3E7 222 aa17.87■□□□□ 0.45
CHD8-208ENST00000555301 IFIT5Q13325 482 aaKnown RBP17.86■□□□□ 0.45
CHD8-208ENST00000555301 GRAPQ13588 217 aa17.86■□□□□ 0.45
CHD8-208ENST00000555301 CCDC57Q2TAC2 916 aa17.86■□□□□ 0.45
CHD8-208ENST00000555301 FAM161AQ3B820 660 aa17.86■□□□□ 0.45
CHD8-208ENST00000555301 GRAPLQ8TC17 118 aaPredicted RBP17.86■□□□□ 0.45
CHD8-208ENST00000555301 CDC5LQ99459 802 aaKnown RBP17.86■□□□□ 0.45
CHD8-208ENST00000555301 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
CHD8-208ENST00000555301 ANKRD18BA2A2Z9 1011 aa17.85■□□□□ 0.45
CHD8-208ENST00000555301 BBOX1O75936 387 aa17.85■□□□□ 0.45
CHD8-208ENST00000555301 ITGA6P23229 1130 aa17.85■□□□□ 0.45
CHD8-208ENST00000555301 LAMB2P55268 1798 aa17.85■□□□□ 0.45
CHD8-208ENST00000555301 AAMPQ13685 434 aa17.85■□□□□ 0.45
CHD8-208ENST00000555301 DALRD3Q5D0E6 543 aaKnown RBP17.85■□□□□ 0.45
CHD8-208ENST00000555301 DDX60Q8IY21 1712 aaKnown RBP17.85■□□□□ 0.45
CHD8-208ENST00000555301 ANKRD31Q8N7Z5 1873 aa17.85■□□□□ 0.45
CHD8-208ENST00000555301 MTX1Q13505 466 aa17.84■□□□□ 0.45
CHD8-208ENST00000555301 TMC4Q7Z404 712 aa17.84■□□□□ 0.45
CHD8-208ENST00000555301 C1orf115Q9H7X2 142 aa17.84■□□□□ 0.45
CHD8-208ENST00000555301 SEC31BQ9NQW1 1179 aa17.84■□□□□ 0.45
CHD8-208ENST00000555301 RPS8P62241 208 aaKnown RBP17.83■□□□□ 0.44
CHD8-208ENST00000555301 TAF7LQ5H9L4 462 aa17.83■□□□□ 0.44
CHD8-208ENST00000555301 PRPF40BQ6NWY9 871 aaKnown RBP17.83■□□□□ 0.44
CHD8-208ENST00000555301 ANKRD18AQ8IVF6 992 aa17.83■□□□□ 0.44
CHD8-208ENST00000555301 CELF1Q92879 486 aaKnown RBP17.83■□□□□ 0.44
CHD8-208ENST00000555301 SRGAP3O43295 1099 aa17.82■□□□□ 0.44
CHD8-208ENST00000555301 IGHMBP2P38935 993 aaKnown RBP17.82■□□□□ 0.44
CHD8-208ENST00000555301 RPAP2Q8IXW5 612 aaPredicted RBP17.82■□□□□ 0.44
CHD8-208ENST00000555301 TMX4Q9H1E5 349 aaPredicted RBP17.82■□□□□ 0.44
CHD8-208ENST00000555301 BCS1LQ9Y276 419 aa17.82■□□□□ 0.44
CHD8-208ENST00000555301 PPEF1O14829 653 aaPredicted RBP17.81■□□□□ 0.44
CHD8-208ENST00000555301 ATP8B2P98198 1209 aa17.81■□□□□ 0.44
CHD8-208ENST00000555301 CEP85Q6P2H3 762 aa17.81■□□□□ 0.44
CHD8-208ENST00000555301 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
CHD8-208ENST00000555301 COL11A2P13942 1736 aaPredicted RBP17.81■□□□□ 0.44
CHD8-208ENST00000555301 KIAA1551Q9HCM1 1747 aa17.81■□□□□ 0.44
CHD8-208ENST00000555301 SOGA3Q5TF21 947 aa17.8■□□□□ 0.44
CHD8-208ENST00000555301 CC2D2BQ6DHV5 1058 aa17.8■□□□□ 0.44
CHD8-208ENST00000555301 EXOC6Q8TAG9 804 aa17.8■□□□□ 0.44
CHD8-208ENST00000555301 BSDC1Q9NW68 430 aaPredicted RBP17.8■□□□□ 0.44
CHD8-208ENST00000555301 WWC3Q9ULE0 1092 aa17.8■□□□□ 0.44
CHD8-208ENST00000555301 RFX5P48382 616 aaPredicted RBP17.79■□□□□ 0.44
CHD8-208ENST00000555301 IRX6P78412 446 aaPredicted RBP17.79■□□□□ 0.44
CHD8-208ENST00000555301 SP8Q8IXZ3 490 aa17.79■□□□□ 0.44
CHD8-208ENST00000555301 ATP6V0A2Q9Y487 856 aa17.79■□□□□ 0.44
CHD8-208ENST00000555301 PNMA6EA0A0J9YXQ4 647 aa17.78■□□□□ 0.44
CHD8-208ENST00000555301 C21orf2O43822 256 aa17.78■□□□□ 0.44
CHD8-208ENST00000555301 HMMRO75330 724 aa17.78■□□□□ 0.44
CHD8-208ENST00000555301 NEFLP07196 543 aa17.78■□□□□ 0.44
CHD8-208ENST00000555301 GRIPAP1Q4V328 841 aa17.78■□□□□ 0.44
CHD8-208ENST00000555301 LDHAL6AQ6ZMR3 332 aa17.78■□□□□ 0.44
CHD8-208ENST00000555301 SSH3Q8TE77 659 aa17.78■□□□□ 0.44
CHD8-208ENST00000555301 C7orf43Q8WVR3 580 aa17.78■□□□□ 0.44
CHD8-208ENST00000555301 FBXO3Q9UK99 471 aa17.78■□□□□ 0.44
CHD8-208ENST00000555301 DLEC1Q9Y238 1755 aa17.77■□□□□ 0.44
CHD8-208ENST00000555301 PTPN12Q05209 780 aaKnown RBP17.77■□□□□ 0.44
CHD8-208ENST00000555301 POLA2Q14181 598 aa17.77■□□□□ 0.44
CHD8-208ENST00000555301 GPR162Q16538 588 aa17.77■□□□□ 0.44
CHD8-208ENST00000555301 PELP1Q8IZL8 1130 aaKnown RBP17.77■□□□□ 0.44
CHD8-208ENST00000555301 ZNF594Q96JF6 807 aaPredicted RBP17.77■□□□□ 0.44
CHD8-208ENST00000555301 COPRSQ9NQ92 184 aa17.77■□□□□ 0.44
CHD8-208ENST00000555301 CNNM1Q9NRU3 951 aa17.77■□□□□ 0.44
CHD8-208ENST00000555301 CCDC93Q567U6 631 aa17.76■□□□□ 0.43
CHD8-208ENST00000555301 RTKN2Q8IZC4 609 aa17.76■□□□□ 0.43
CHD8-208ENST00000555301 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
CHD8-208ENST00000555301 DCAF8L1A6NGE4 600 aa17.75■□□□□ 0.43
CHD8-208ENST00000555301 KLHDC4Q8TBB5 520 aa17.75■□□□□ 0.43
CHD8-208ENST00000555301 EYA2O00167 538 aa17.74■□□□□ 0.43
CHD8-208ENST00000555301 GRIN3BO60391 1043 aa17.74■□□□□ 0.43
CHD8-208ENST00000555301 CIAO1O76071 339 aa17.74■□□□□ 0.43
CHD8-208ENST00000555301 YBX3P16989 372 aaKnown RBP eCLIP17.74■□□□□ 0.436e-6■□□□□ 10.9
CHD8-208ENST00000555301 ANKRD2Q9GZV1 360 aa17.74■□□□□ 0.43
CHD8-208ENST00000555301 MINPP1Q9UNW1 487 aa17.74■□□□□ 0.43
CHD8-208ENST00000555301 MYH3P11055 1940 aa17.74■□□□□ 0.43
CHD8-208ENST00000555301 MROH5Q6ZUA9 1318 aa17.73■□□□□ 0.43
CHD8-208ENST00000555301 IL15P40933 162 aaPredicted RBP17.73■□□□□ 0.43
CHD8-208ENST00000555301 SIRT2Q8IXJ6 389 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms