RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 SMC5Q8IY18 1101 aa21.91■■□□□ 1.1
PSEN1-212ENST00000555254 TRIM28Q13263 835 aaKnown RBP21.9■■□□□ 1.1
PSEN1-212ENST00000555254 NLRP10Q86W26 655 aa21.9■■□□□ 1.1
PSEN1-212ENST00000555254 SIRT2Q8IXJ6 389 aa21.9■■□□□ 1.1
PSEN1-212ENST00000555254 AFDNP55196 1824 aaKnown RBP21.9■■□□□ 1.1
PSEN1-212ENST00000555254 NTSR2O95665 410 aa21.89■■□□□ 1.09
PSEN1-212ENST00000555254 ISCA1Q9BUE6 129 aa21.89■■□□□ 1.09
PSEN1-212ENST00000555254 TRMT112Q9UI30 125 aaKnown RBP21.89■■□□□ 1.09
PSEN1-212ENST00000555254 PDZRN3Q9UPQ7 1066 aa21.89■■□□□ 1.09
PSEN1-212ENST00000555254 NRXN2Q9P2S2 1712 aa21.89■■□□□ 1.09
PSEN1-212ENST00000555254 ARHGAP27Q6ZUM4 889 aa21.88■■□□□ 1.09
PSEN1-212ENST00000555254 TTLL6Q8N841 843 aa21.88■■□□□ 1.09
PSEN1-212ENST00000555254 DCTPP1Q9H773 170 aa21.88■■□□□ 1.09
PSEN1-212ENST00000555254 N4BP2Q86UW6 1770 aaPredicted RBP21.88■■□□□ 1.09
PSEN1-212ENST00000555254 KIF13BQ9NQT8 1826 aa21.87■■□□□ 1.09
PSEN1-212ENST00000555254 ZNF219Q9P2Y4 722 aaPredicted RBP21.87■■□□□ 1.09
PSEN1-212ENST00000555254 SRGNP10124 158 aa21.86■■□□□ 1.09
PSEN1-212ENST00000555254 ANKRD45Q5TZF3 282 aa21.86■■□□□ 1.09
PSEN1-212ENST00000555254 UBE3BQ7Z3V4 1068 aa21.86■■□□□ 1.09
PSEN1-212ENST00000555254 SYNE4Q8N205 404 aa21.86■■□□□ 1.09
PSEN1-212ENST00000555254 ABCC12Q96J65 1359 aa21.86■■□□□ 1.09
PSEN1-212ENST00000555254 NUP98P52948 1817 aa21.85■■□□□ 1.09
PSEN1-212ENST00000555254 H7C1W4 665 aa21.85■■□□□ 1.09
PSEN1-212ENST00000555254 RTL5Q5HYW3 569 aaPredicted RBP21.85■■□□□ 1.09
PSEN1-212ENST00000555254 MASTLQ96GX5 879 aa21.85■■□□□ 1.09
PSEN1-212ENST00000555254 SUCLG2Q96I99 432 aa21.85■■□□□ 1.09
PSEN1-212ENST00000555254 SRGAP3O43295 1099 aa21.84■■□□□ 1.09
PSEN1-212ENST00000555254 HCLS1P14317 486 aaPredicted RBP21.84■■□□□ 1.09
PSEN1-212ENST00000555254 NPR1P16066 1061 aa21.84■■□□□ 1.09
PSEN1-212ENST00000555254 NUCB1Q02818 461 aa21.84■■□□□ 1.09
PSEN1-212ENST00000555254 STYK1Q6J9G0 422 aa21.84■■□□□ 1.09
PSEN1-212ENST00000555254 KIAA1551Q9HCM1 1747 aa21.83■■□□□ 1.09
PSEN1-212ENST00000555254 SH3TC1Q8TE82 1336 aa21.83■■□□□ 1.09
PSEN1-212ENST00000555254 RGS3P49796 1198 aa21.83■■□□□ 1.09
PSEN1-212ENST00000555254 HSP90AB4PQ58FF6 505 aa21.83■■□□□ 1.09
PSEN1-212ENST00000555254 COL13A1Q5TAT6 717 aaPredicted RBP21.83■■□□□ 1.09
PSEN1-212ENST00000555254 SSH3Q8TE77 659 aa21.83■■□□□ 1.09
PSEN1-212ENST00000555254 CNKSR1Q969H4 720 aa21.83■■□□□ 1.09
PSEN1-212ENST00000555254 FAM89AQ96GI7 184 aa21.83■■□□□ 1.09
PSEN1-212ENST00000555254 ARFGEF2Q9Y6D5 1785 aa21.82■■□□□ 1.08
PSEN1-212ENST00000555254 KLRG2A4D1S0 409 aaPredicted RBP21.82■■□□□ 1.08
PSEN1-212ENST00000555254 PCCAP05165 728 aaPredicted RBP21.82■■□□□ 1.08
PSEN1-212ENST00000555254 MTX1Q13505 466 aa21.82■■□□□ 1.08
PSEN1-212ENST00000555254 SLC10A5Q5PT55 438 aa21.82■■□□□ 1.08
PSEN1-212ENST00000555254 C3orf67Q6ZVT6 689 aa21.82■■□□□ 1.08
PSEN1-212ENST00000555254 CHD1LQ86WJ1 897 aa21.82■■□□□ 1.08
PSEN1-212ENST00000555254 RPGRQ92834 1020 aaKnown RBP21.82■■□□□ 1.08
PSEN1-212ENST00000555254 NLRP3Q96P20 1036 aa21.82■■□□□ 1.08
PSEN1-212ENST00000555254 PNMA6EA0A0J9YXQ4 647 aa21.81■■□□□ 1.08
PSEN1-212ENST00000555254 POLA2Q14181 598 aa21.81■■□□□ 1.08
PSEN1-212ENST00000555254 JARID2Q92833 1246 aaPredicted RBP21.81■■□□□ 1.08
PSEN1-212ENST00000555254 BICC1Q9H694 974 aaKnown RBP21.81■■□□□ 1.08
PSEN1-212ENST00000555254 C21orf2O43822 256 aa21.8■■□□□ 1.08
PSEN1-212ENST00000555254 RAB11FIP3O75154 756 aa21.8■■□□□ 1.08
PSEN1-212ENST00000555254 ZBTB38Q8NAP3 1195 aaPredicted RBP21.8■■□□□ 1.08
PSEN1-212ENST00000555254 GPBP1L1Q9HC44 474 aaPredicted RBP21.8■■□□□ 1.08
PSEN1-212ENST00000555254 SURF6O75683 361 aaKnown RBP21.79■■□□□ 1.08
PSEN1-212ENST00000555254 HSP90B1P14625 803 aaKnown RBP21.79■■□□□ 1.08
PSEN1-212ENST00000555254 PRPF40BQ6NWY9 871 aaKnown RBP21.79■■□□□ 1.08
PSEN1-212ENST00000555254 ANKRD31Q8N7Z5 1873 aa21.78■■□□□ 1.08
PSEN1-212ENST00000555254 CASP7P55210 303 aa21.78■■□□□ 1.08
PSEN1-212ENST00000555254 OS9Q13438 667 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-212ENST00000555254 DNAJC5GQ8N7S2 189 aa21.78■■□□□ 1.08
PSEN1-212ENST00000555254 RBM17Q96I25 401 aaKnown RBP21.78■■□□□ 1.08
PSEN1-212ENST00000555254 LNPKQ9C0E8 428 aa21.78■■□□□ 1.08
PSEN1-212ENST00000555254 APBB1O00213 710 aa21.77■■□□□ 1.08
PSEN1-212ENST00000555254 IRS4O14654 1257 aaPredicted RBP21.77■■□□□ 1.08
PSEN1-212ENST00000555254 SLC34A2O95436 690 aa21.77■■□□□ 1.08
PSEN1-212ENST00000555254 ALDH1B1P30837 517 aa21.77■■□□□ 1.08
PSEN1-212ENST00000555254 CRY2Q49AN0 593 aa21.77■■□□□ 1.08
PSEN1-212ENST00000555254 KAZALD1Q96I82 304 aa21.77■■□□□ 1.08
PSEN1-212ENST00000555254 ZNF526Q8TF50 670 aaPredicted RBP21.76■■□□□ 1.07
PSEN1-212ENST00000555254 EXOC6BQ9Y2D4 811 aa21.76■■□□□ 1.07
PSEN1-212ENST00000555254 CHMP3Q9Y3E7 222 aa21.76■■□□□ 1.07
PSEN1-212ENST00000555254 PRELPP51888 382 aa21.75■■□□□ 1.07
PSEN1-212ENST00000555254 G3BP1Q13283 466 aaKnown RBP eCLIP21.75■■□□□ 1.07
PSEN1-212ENST00000555254 ERC1Q8IUD2 1116 aa21.75■■□□□ 1.07
PSEN1-212ENST00000555254 LRRCC1Q9C099 1032 aa21.75■■□□□ 1.07
PSEN1-212ENST00000555254 CDHR2Q9BYE9 1310 aa21.75■■□□□ 1.07
PSEN1-212ENST00000555254 HOXA10P31260 410 aaPredicted RBP21.74■■□□□ 1.07
PSEN1-212ENST00000555254 RABL6Q3YEC7 729 aaPredicted RBP21.74■■□□□ 1.07
PSEN1-212ENST00000555254 EPHA10Q5JZY3 1008 aa21.74■■□□□ 1.07
PSEN1-212ENST00000555254 LMBR1LQ6UX01 489 aa21.74■■□□□ 1.07
PSEN1-212ENST00000555254 SKAP1Q86WV1 359 aa21.74■■□□□ 1.07
PSEN1-212ENST00000555254 NOP58Q9Y2X3 529 aaKnown RBP21.74■■□□□ 1.07
PSEN1-212ENST00000555254 RIC1Q4ADV7 1423 aa21.73■■□□□ 1.07
PSEN1-212ENST00000555254 FOXO4P98177 505 aa21.73■■□□□ 1.07
PSEN1-212ENST00000555254 RASSF7Q02833 373 aa21.73■■□□□ 1.07
PSEN1-212ENST00000555254 PLA2G12BQ9BX93 195 aa21.73■■□□□ 1.07
PSEN1-212ENST00000555254 COL11A2P13942 1736 aaPredicted RBP21.72■■□□□ 1.07
PSEN1-212ENST00000555254 ANKRD36CQ5JPF3 1778 aa21.72■■□□□ 1.07
PSEN1-212ENST00000555254 OLFM4Q6UX06 510 aa21.72■■□□□ 1.07
PSEN1-212ENST00000555254 DDX46Q7L014 1031 aaKnown RBP21.72■■□□□ 1.07
PSEN1-212ENST00000555254 KIF1BPQ96EK5 621 aa21.72■■□□□ 1.07
PSEN1-212ENST00000555254 CRAMP1Q96RY5 1269 aa21.72■■□□□ 1.07
PSEN1-212ENST00000555254 BCL11AQ9H165 835 aa21.72■■□□□ 1.07
PSEN1-212ENST00000555254 TNRC6CQ9HCJ0 1690 aaKnown RBP21.72■■□□□ 1.07
PSEN1-212ENST00000555254 PDE8AO60658 829 aa21.7■■□□□ 1.06
PSEN1-212ENST00000555254 PDE4AP27815 886 aa21.7■■□□□ 1.06
PSEN1-212ENST00000555254 SOGA3Q5TF21 947 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms