RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 PHF8Q9UPP1 1060 aa18.88■□□□□ 0.61
MARK3-209ENST00000555235 LEO1Q8WVC0 666 aaPredicted RBP18.87■□□□□ 0.61
MARK3-209ENST00000555235 HDAC5Q9UQL6 1122 aa18.87■□□□□ 0.61
MARK3-209ENST00000555235 RBM8AQ9Y5S9 174 aaKnown RBP18.87■□□□□ 0.61
MARK3-209ENST00000555235 SLFN14P0C7P3 912 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 PLEKHO1Q53GL0 409 aaPredicted RBP18.86■□□□□ 0.61
MARK3-209ENST00000555235 CREB3L3Q68CJ9 461 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 SARM1Q6SZW1 724 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 MPRIPQ6WCQ1 1025 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 MAP4K1Q92918 833 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 SNRKQ9NRH2 765 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 SETD1BQ9UPS6 1966 aaKnown RBP18.86■□□□□ 0.61
MARK3-209ENST00000555235 HEG1Q9ULI3 1381 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 HIP1O00291 1037 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 DTNBO60941 627 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 RBM6P78332 1123 aaKnown RBP18.86■□□□□ 0.61
MARK3-209ENST00000555235 PROSER3Q2NL68 480 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 AACSQ86V21 672 aa18.86■□□□□ 0.61
MARK3-209ENST00000555235 RNMTO43148 476 aaKnown RBP18.85■□□□□ 0.61
MARK3-209ENST00000555235 GIGYF1O75420 1035 aaPredicted RBP18.85■□□□□ 0.61
MARK3-209ENST00000555235 KCNJ4P48050 445 aa18.85■□□□□ 0.61
MARK3-209ENST00000555235 FAM173BQ6P4H8 233 aa18.85■□□□□ 0.61
MARK3-209ENST00000555235 LRRC8AQ8IWT6 810 aa18.85■□□□□ 0.61
MARK3-209ENST00000555235 DNAJC25Q9H1X3 360 aa18.85■□□□□ 0.61
MARK3-209ENST00000555235 GOLGA6L19H0YKK7 550 aa18.85■□□□□ 0.61
MARK3-209ENST00000555235 BICD2Q8TD16 824 aa18.85■□□□□ 0.61
MARK3-209ENST00000555235 MRFAP1L1Q96HT8 127 aa18.85■□□□□ 0.61
MARK3-209ENST00000555235 ALDH8A1Q9H2A2 487 aaPredicted RBP18.85■□□□□ 0.61
MARK3-209ENST00000555235 CCDC66A2RUB6 948 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 SASH1O94885 1247 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 HSPA2P54652 639 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 NMIQ13287 307 aaPredicted RBP18.84■□□□□ 0.61
MARK3-209ENST00000555235 PTPN14Q15678 1187 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 CWF19L2Q2TBE0 894 aaKnown RBP18.84■□□□□ 0.61
MARK3-209ENST00000555235 RNF20Q5VTR2 975 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 DDX54Q8TDD1 881 aaKnown RBP18.84■□□□□ 0.61
MARK3-209ENST00000555235 FAM227BQ96M60 508 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 UTYO14607 1347 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 NR1I2O75469 434 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 FAM193AP78312 1265 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 NAA30Q147X3 362 aaPredicted RBP18.84■□□□□ 0.61
MARK3-209ENST00000555235 TERF2Q15554 542 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 CCDC144BQ3MJ40 725 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 SLFNL1Q499Z3 407 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 CCDC144CPQ8IYA2 1237 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 ZNF592Q92610 1267 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 LRRC59Q96AG4 307 aaKnown RBP18.84■□□□□ 0.61
MARK3-209ENST00000555235 KAZALD1Q96I82 304 aa18.84■□□□□ 0.61
MARK3-209ENST00000555235 SLC27A2O14975 620 aa18.83■□□□□ 0.61
MARK3-209ENST00000555235 AMOTQ4VCS5 1084 aa18.83■□□□□ 0.61
MARK3-209ENST00000555235 BLOC1S2Q6QNY1 142 aa18.83■□□□□ 0.61
MARK3-209ENST00000555235 NYAP1Q6ZVC0 841 aa18.83■□□□□ 0.61
MARK3-209ENST00000555235 EAF2Q96CJ1 260 aaPredicted RBP18.83■□□□□ 0.61
MARK3-209ENST00000555235 SUCLG2Q96I99 432 aa18.83■□□□□ 0.61
MARK3-209ENST00000555235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.83■□□□□ 0.61
MARK3-209ENST00000555235 OVOS2A0A0G2JMS6 1433 aa18.83■□□□□ 0.6
MARK3-209ENST00000555235 NCAPD2Q15021 1401 aa18.83■□□□□ 0.6
MARK3-209ENST00000555235 ERO1AQ96HE7 468 aa18.83■□□□□ 0.6
MARK3-209ENST00000555235 TFIP11Q9UBB9 837 aaKnown RBP18.83■□□□□ 0.6
MARK3-209ENST00000555235 RGPD2P0DJD1 1756 aa18.82■□□□□ 0.6
MARK3-209ENST00000555235 PHRF1Q9P1Y6 1649 aaKnown RBP18.82■□□□□ 0.6
MARK3-209ENST00000555235 KCNH5Q8NCM2 988 aa18.82■□□□□ 0.6
MARK3-209ENST00000555235 LINS1Q8NG48 757 aa18.82■□□□□ 0.6
MARK3-209ENST00000555235 KIF2AO00139 706 aaPredicted RBP18.81■□□□□ 0.6
MARK3-209ENST00000555235 GRM8O00222 908 aa18.81■□□□□ 0.6
MARK3-209ENST00000555235 COL9A3Q14050 684 aaPredicted RBP18.81■□□□□ 0.6
MARK3-209ENST00000555235 LARP1Q6PKG0 1096 aaKnown RBP18.81■□□□□ 0.6
MARK3-209ENST00000555235 CREBRFQ8IUR6 639 aa18.81■□□□□ 0.6
MARK3-209ENST00000555235 PXDNQ92626 1479 aa18.81■□□□□ 0.6
MARK3-209ENST00000555235 CTAGE5O15320 804 aa18.81■□□□□ 0.6
MARK3-209ENST00000555235 G3BP1Q13283 466 aaKnown RBP eCLIP18.81■□□□□ 0.6
MARK3-209ENST00000555235 KMT5BQ4FZB7 885 aa18.81■□□□□ 0.6
MARK3-209ENST00000555235 ZNF215Q9UL58 517 aaPredicted RBP18.81■□□□□ 0.6
MARK3-209ENST00000555235 NPHP4O75161 1426 aaPredicted RBP18.8■□□□□ 0.6
MARK3-209ENST00000555235 PRAMEF22A3QJZ6 481 aa18.8■□□□□ 0.6
MARK3-209ENST00000555235 IQCB1Q15051 598 aa18.8■□□□□ 0.6
MARK3-209ENST00000555235 PGBD1Q96JS3 809 aa18.8■□□□□ 0.6
MARK3-209ENST00000555235 CCDC8Q9H0W5 538 aaPredicted RBP18.8■□□□□ 0.6
MARK3-209ENST00000555235 BICC1Q9H694 974 aaKnown RBP18.8■□□□□ 0.6
MARK3-209ENST00000555235 KCND1Q9NSA2 647 aa18.8■□□□□ 0.6
MARK3-209ENST00000555235 FAM53CQ9NYF3 392 aa18.8■□□□□ 0.6
MARK3-209ENST00000555235 SKILP12757 684 aa18.8■□□□□ 0.6
MARK3-209ENST00000555235 RPS6KB1P23443 525 aa18.8■□□□□ 0.6
MARK3-209ENST00000555235 C1orf141Q5JVX7 400 aa18.8■□□□□ 0.6
MARK3-209ENST00000555235 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
MARK3-209ENST00000555235 CFAP45Q9UL16 551 aa18.8■□□□□ 0.6
MARK3-209ENST00000555235 MED23Q9ULK4 1368 aa18.79■□□□□ 0.6
MARK3-209ENST00000555235 A0A0D9SFI3 127 aa18.79■□□□□ 0.6
MARK3-209ENST00000555235 FGD1P98174 961 aa18.79■□□□□ 0.6
MARK3-209ENST00000555235 STX1AQ16623 288 aa18.79■□□□□ 0.6
MARK3-209ENST00000555235 TLR7Q9NYK1 1049 aaKnown RBP18.79■□□□□ 0.6
MARK3-209ENST00000555235 ZSCAN16Q9H4T2 348 aaPredicted RBP18.79■□□□□ 0.6
MARK3-209ENST00000555235 HMG20BQ9P0W2 317 aa18.79■□□□□ 0.6
MARK3-209ENST00000555235 JCADQ9P266 1359 aa18.78■□□□□ 0.6
MARK3-209ENST00000555235 ANKLE2Q86XL3 938 aa18.78■□□□□ 0.6
MARK3-209ENST00000555235 SLU7O95391 586 aaKnown RBP18.77■□□□□ 0.6
MARK3-209ENST00000555235 TOB2Q14106 344 aaPredicted RBP18.77■□□□□ 0.6
MARK3-209ENST00000555235 BOLA2Q9H3K6 86 aa18.77■□□□□ 0.6
MARK3-209ENST00000555235 USP27XA6NNY8 438 aa18.77■□□□□ 0.6
MARK3-209ENST00000555235 DDX58O95786 925 aaKnown RBP18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms