RNA–Protein interactions for RNA: ENST00000555082.5

PRKCH-211, Transcript of protein kinase C eta, humanhuman

TSL 1 (best) BASIC

Gene PRKCH, Length 2,932 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-211ENST00000555082 GPT2Q8TD30 523 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 CHMP3Q9Y3E7 222 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12□□□□□ -0.49
PRKCH-211ENST00000555082 SYCE3A1L190 88 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 RXRBP28702 533 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 ZNF445P59923 1031 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 PLEKHM2Q8IWE5 1019 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 ISCA1Q9BUE6 129 aa12□□□□□ -0.49
PRKCH-211ENST00000555082 RABEP1Q15276 862 aa11.99□□□□□ -0.49
PRKCH-211ENST00000555082 FAM196AQ6ZSG2 479 aa11.99□□□□□ -0.49
PRKCH-211ENST00000555082 BCL11BQ9C0K0 894 aaPredicted RBP11.99□□□□□ -0.49
PRKCH-211ENST00000555082 MYH14Q7Z406 1995 aaKnown RBP11.99□□□□□ -0.49
PRKCH-211ENST00000555082 UBN2Q6ZU65 1347 aa11.99□□□□□ -0.49
PRKCH-211ENST00000555082 H7C1W4 665 aa11.99□□□□□ -0.49
PRKCH-211ENST00000555082 GNPATO15228 680 aa11.99□□□□□ -0.49
PRKCH-211ENST00000555082 PHF14O94880 888 aa11.99□□□□□ -0.49
PRKCH-211ENST00000555082 LMBR1LQ6UX01 489 aa11.99□□□□□ -0.49
PRKCH-211ENST00000555082 NOL8Q76FK4 1167 aaKnown RBP11.99□□□□□ -0.49
PRKCH-211ENST00000555082 SRP68Q9UHB9 627 aaKnown RBP11.99□□□□□ -0.49
PRKCH-211ENST00000555082 ARFGEF2Q9Y6D5 1785 aa11.99□□□□□ -0.49
PRKCH-211ENST00000555082 NUCB2P80303 420 aa11.98□□□□□ -0.49
PRKCH-211ENST00000555082 CCDC191Q8NCU4 936 aa11.98□□□□□ -0.49
PRKCH-211ENST00000555082 CAMTA2O94983 1202 aa11.98□□□□□ -0.49
PRKCH-211ENST00000555082 OS9Q13438 667 aaPredicted RBP11.98□□□□□ -0.49
PRKCH-211ENST00000555082 BICDL1Q6ZP65 573 aa11.98□□□□□ -0.49
PRKCH-211ENST00000555082 NLRP10Q86W26 655 aa11.98□□□□□ -0.49
PRKCH-211ENST00000555082 USP26Q9BXU7 913 aa11.98□□□□□ -0.49
PRKCH-211ENST00000555082 PRDM10Q9NQV6 1147 aa11.98□□□□□ -0.49
PRKCH-211ENST00000555082 TMEM63CQ9P1W3 806 aa11.98□□□□□ -0.49
PRKCH-211ENST00000555082 NOL7Q9UMY1 257 aaKnown RBP11.98□□□□□ -0.49
PRKCH-211ENST00000555082 ZDHHC9Q9Y397 364 aa11.98□□□□□ -0.49
PRKCH-211ENST00000555082 CLEC17AQ6ZS10 378 aa11.97□□□□□ -0.49
PRKCH-211ENST00000555082 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
PRKCH-211ENST00000555082 IBTKQ9P2D0 1353 aaPredicted RBP11.97□□□□□ -0.49
PRKCH-211ENST00000555082 BTAF1O14981 1849 aa11.97□□□□□ -0.49
PRKCH-211ENST00000555082 FOXO4P98177 505 aa11.97□□□□□ -0.49
PRKCH-211ENST00000555082 LRRCC1Q9C099 1032 aa11.97□□□□□ -0.49
PRKCH-211ENST00000555082 COL15A1P39059 1388 aa11.97□□□□□ -0.49
PRKCH-211ENST00000555082 MTX1Q13505 466 aa11.97□□□□□ -0.49
PRKCH-211ENST00000555082 ZNF594Q96JF6 807 aaPredicted RBP11.97□□□□□ -0.49
PRKCH-211ENST00000555082 BRWD3Q6RI45 1802 aa11.97□□□□□ -0.49
PRKCH-211ENST00000555082 CYP2E1P05181 493 aaPredicted RBP11.96□□□□□ -0.49
PRKCH-211ENST00000555082 TTC22Q5TAA0 569 aa11.96□□□□□ -0.49
PRKCH-211ENST00000555082 RHPN1Q8TCX5 695 aa11.96□□□□□ -0.49
PRKCH-211ENST00000555082 TRMT112Q9UI30 125 aaKnown RBP11.96□□□□□ -0.49
PRKCH-211ENST00000555082 N4BP2Q86UW6 1770 aaPredicted RBP11.96□□□□□ -0.49
PRKCH-211ENST00000555082 PTMAP06454 111 aaKnown RBP11.96□□□□□ -0.5
PRKCH-211ENST00000555082 SUSD4Q5VX71 490 aa11.96□□□□□ -0.5
PRKCH-211ENST00000555082 PROM2Q8N271 834 aa11.96□□□□□ -0.5
PRKCH-211ENST00000555082 TSC1Q92574 1164 aa11.96□□□□□ -0.5
PRKCH-211ENST00000555082 CCDC24Q8N4L8 307 aa11.95□□□□□ -0.5
PRKCH-211ENST00000555082 NIP7Q9Y221 180 aaKnown RBP eCLIP11.95□□□□□ -0.5
PRKCH-211ENST00000555082 ZKSCAN5Q9Y2L8 839 aa11.95□□□□□ -0.5
PRKCH-211ENST00000555082 HCLS1P14317 486 aaPredicted RBP11.95□□□□□ -0.5
PRKCH-211ENST00000555082 SDSP20132 328 aa11.95□□□□□ -0.5
PRKCH-211ENST00000555082 RFX5P48382 616 aaPredicted RBP11.95□□□□□ -0.5
PRKCH-211ENST00000555082 USPL1Q5W0Q7 1092 aa11.95□□□□□ -0.5
PRKCH-211ENST00000555082 PDLIM2Q96JY6 352 aa11.95□□□□□ -0.5
PRKCH-211ENST00000555082 NUP188Q5SRE5 1749 aa11.95□□□□□ -0.5
PRKCH-211ENST00000555082 NHSQ6T4R5 1651 aa11.94□□□□□ -0.5
PRKCH-211ENST00000555082 ERVV-1B6SEH8 477 aa11.94□□□□□ -0.5
PRKCH-211ENST00000555082 ZNF34Q8IZ26 560 aa11.94□□□□□ -0.5
PRKCH-211ENST00000555082 ZNF500O60304 480 aaPredicted RBP11.94□□□□□ -0.5
PRKCH-211ENST00000555082 SASH1O94885 1247 aa11.94□□□□□ -0.5
PRKCH-211ENST00000555082 PTPN12Q05209 780 aaKnown RBP11.94□□□□□ -0.5
PRKCH-211ENST00000555082 TRIM28Q13263 835 aaKnown RBP11.94□□□□□ -0.5
PRKCH-211ENST00000555082 RABL6Q3YEC7 729 aaPredicted RBP11.94□□□□□ -0.5
PRKCH-211ENST00000555082 BCL2L12Q9HB09 334 aa11.94□□□□□ -0.5
PRKCH-211ENST00000555082 CNTNAP4Q9C0A0 1308 aa11.94□□□□□ -0.5
PRKCH-211ENST00000555082 RPS6KA4O75676 772 aa11.93□□□□□ -0.5
PRKCH-211ENST00000555082 APBA3O96018 575 aa11.93□□□□□ -0.5
PRKCH-211ENST00000555082 ZBTB38Q8NAP3 1195 aaPredicted RBP11.93□□□□□ -0.5
PRKCH-211ENST00000555082 ARHGEF1Q92888 912 aaKnown RBP11.93□□□□□ -0.5
PRKCH-211ENST00000555082 ZNF830Q96NB3 372 aaPredicted RBP11.93□□□□□ -0.5
PRKCH-211ENST00000555082 AFDNP55196 1824 aaKnown RBP11.93□□□□□ -0.5
PRKCH-211ENST00000555082 ST18O60284 1047 aa11.93□□□□□ -0.5
PRKCH-211ENST00000555082 PCCAP05165 728 aaPredicted RBP11.93□□□□□ -0.5
PRKCH-211ENST00000555082 LRSAM1Q6UWE0 723 aa11.93□□□□□ -0.5
PRKCH-211ENST00000555082 GDPD2Q9HCC8 539 aa11.93□□□□□ -0.5
PRKCH-211ENST00000555082 RTCBQ9Y3I0 505 aaKnown RBP11.93□□□□□ -0.5
PRKCH-211ENST00000555082 IRS4O14654 1257 aaPredicted RBP11.93□□□□□ -0.5
PRKCH-211ENST00000555082 PDE1AP54750 535 aa11.93□□□□□ -0.5
PRKCH-211ENST00000555082 G3BP1Q13283 466 aaKnown RBP eCLIP11.93□□□□□ -0.5
PRKCH-211ENST00000555082 TXNRD1Q16881 649 aa11.93□□□□□ -0.5
PRKCH-211ENST00000555082 HSP90AB3PQ58FF7 597 aa11.93□□□□□ -0.5
PRKCH-211ENST00000555082 TBC1D9BQ66K14 1250 aa11.93□□□□□ -0.5
PRKCH-211ENST00000555082 AK7Q96M32 723 aa11.93□□□□□ -0.5
PRKCH-211ENST00000555082 PUS3Q9BZE2 481 aaKnown RBP11.93□□□□□ -0.5
PRKCH-211ENST00000555082 SBF2Q86WG5 1849 aa11.92□□□□□ -0.5
PRKCH-211ENST00000555082 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
PRKCH-211ENST00000555082 LRRC24Q50LG9 513 aa11.92□□□□□ -0.5
PRKCH-211ENST00000555082 DNTTIP2Q5QJE6 756 aaKnown RBP11.92□□□□□ -0.5
PRKCH-211ENST00000555082 KIF1BPQ96EK5 621 aa11.92□□□□□ -0.5
PRKCH-211ENST00000555082 PRDM4Q9UKN5 801 aa11.92□□□□□ -0.5
PRKCH-211ENST00000555082 HDAC5Q9UQL6 1122 aa11.92□□□□□ -0.5
PRKCH-211ENST00000555082 CCDC8Q9H0W5 538 aaPredicted RBP11.92□□□□□ -0.5
PRKCH-211ENST00000555082 TLR7Q9NYK1 1049 aaKnown RBP11.92□□□□□ -0.5
PRKCH-211ENST00000555082 NEK4P51957 841 aa11.91□□□□□ -0.5
PRKCH-211ENST00000555082 HS1BP3Q53T59 392 aa11.91□□□□□ -0.5
PRKCH-211ENST00000555082 C17orf53Q8N3J3 647 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms