RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SIL1Q9H173 461 aa10.9□□□□□ -0.67
TDP1-210ENST00000554976 FBXO3Q9UK99 471 aa10.9□□□□□ -0.67
TDP1-210ENST00000554976 LAMA4Q16363 1823 aa10.9□□□□□ -0.67
TDP1-210ENST00000554976 RTL9Q8NET4 1388 aa10.89□□□□□ -0.67
TDP1-210ENST00000554976 RC3H1Q5TC82 1133 aaKnown RBP10.89□□□□□ -0.67
TDP1-210ENST00000554976 FAM89AQ96GI7 184 aa10.89□□□□□ -0.67
TDP1-210ENST00000554976 AK7Q96M32 723 aa10.89□□□□□ -0.67
TDP1-210ENST00000554976 EYA2O00167 538 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 NTSR2O95665 410 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 LRRC24Q50LG9 513 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 TTLL11Q8NHH1 800 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 TRPC5Q9UL62 973 aaPredicted RBP10.88□□□□□ -0.67
TDP1-210ENST00000554976 NRXN2Q9P2S2 1712 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 SGSM2O43147 1006 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 ATP5JP18859 108 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 CTSWP56202 376 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 OS9Q13438 667 aaPredicted RBP10.88□□□□□ -0.67
TDP1-210ENST00000554976 VGLL2Q8N8G2 317 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 BCL2L12Q9HB09 334 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 TBC1D2BQ9UPU7 963 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 MED23Q9ULK4 1368 aa10.88□□□□□ -0.67
TDP1-210ENST00000554976 MAP4K4O95819 1239 aaPredicted RBP10.87□□□□□ -0.67
TDP1-210ENST00000554976 SUSD4Q5VX71 490 aa10.87□□□□□ -0.67
TDP1-210ENST00000554976 ZNF594Q96JF6 807 aaPredicted RBP10.87□□□□□ -0.67
TDP1-210ENST00000554976 PUS3Q9BZE2 481 aaKnown RBP10.87□□□□□ -0.67
TDP1-210ENST00000554976 CCDC8Q9H0W5 538 aaPredicted RBP10.87□□□□□ -0.67
TDP1-210ENST00000554976 IFIT2P09913 472 aaKnown RBP10.87□□□□□ -0.67
TDP1-210ENST00000554976 IL15P40933 162 aaPredicted RBP10.87□□□□□ -0.67
TDP1-210ENST00000554976 CASC1Q6TDU7 716 aa10.87□□□□□ -0.67
TDP1-210ENST00000554976 AMIGO3Q86WK7 504 aa10.87□□□□□ -0.67
TDP1-210ENST00000554976 CNTROBQ8N137 903 aa10.87□□□□□ -0.67
TDP1-210ENST00000554976 LSG1Q9H089 658 aaKnown RBP10.87□□□□□ -0.67
TDP1-210ENST00000554976 RILPL2Q969X0 211 aa10.87□□□□□ -0.67
TDP1-210ENST00000554976 ABCC12Q96J65 1359 aa10.87□□□□□ -0.67
TDP1-210ENST00000554976 REC8O95072 547 aa10.86□□□□□ -0.67
TDP1-210ENST00000554976 GPTP24298 496 aa10.86□□□□□ -0.67
TDP1-210ENST00000554976 RTL5Q5HYW3 569 aaPredicted RBP10.86□□□□□ -0.67
TDP1-210ENST00000554976 KCNB2Q92953 911 aa10.86□□□□□ -0.67
TDP1-210ENST00000554976 EVI5LQ96CN4 794 aa10.86□□□□□ -0.67
TDP1-210ENST00000554976 RIPOR2Q9Y4F9 1068 aa10.86□□□□□ -0.67
TDP1-210ENST00000554976 QSER1Q2KHR3 1735 aa10.86□□□□□ -0.67
TDP1-210ENST00000554976 TRIM6-TRIM34B2RNG4 842 aa10.86□□□□□ -0.67
TDP1-210ENST00000554976 SEPT12Q8IYM1 358 aa10.86□□□□□ -0.67
TDP1-210ENST00000554976 KIAA1551Q9HCM1 1747 aa10.86□□□□□ -0.67
TDP1-210ENST00000554976 RAD50Q92878 1312 aa10.85□□□□□ -0.67
TDP1-210ENST00000554976 PDE8AO60658 829 aa10.85□□□□□ -0.67
TDP1-210ENST00000554976 BECN1Q14457 450 aa10.85□□□□□ -0.67
TDP1-210ENST00000554976 CLEC4GQ6UXB4 293 aa10.85□□□□□ -0.67
TDP1-210ENST00000554976 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.85□□□□□ -0.67
TDP1-210ENST00000554976 DBNDD2Q9BQY9 259 aa10.85□□□□□ -0.67
TDP1-210ENST00000554976 GREM2Q9H772 168 aa10.85□□□□□ -0.67
TDP1-210ENST00000554976 ZNF330Q9Y3S2 320 aaPredicted RBP10.85□□□□□ -0.67
TDP1-210ENST00000554976 LRRC37AA6NMS7 1700 aa10.85□□□□□ -0.67
TDP1-210ENST00000554976 IRS4O14654 1257 aaPredicted RBP10.85□□□□□ -0.67
TDP1-210ENST00000554976 GPATCH3Q96I76 525 aa10.85□□□□□ -0.67
TDP1-210ENST00000554976 HAUS7Q99871 368 aa10.85□□□□□ -0.67
TDP1-210ENST00000554976 PALD1Q9ULE6 856 aa10.85□□□□□ -0.67
TDP1-210ENST00000554976 HSPA4P34932 840 aa10.84□□□□□ -0.67
TDP1-210ENST00000554976 PARP10Q53GL7 1025 aa10.84□□□□□ -0.67
TDP1-210ENST00000554976 FAM182BQ5T319 152 aa10.84□□□□□ -0.67
TDP1-210ENST00000554976 MEX3CQ5U5Q3 659 aaKnown RBP10.84□□□□□ -0.67
TDP1-210ENST00000554976 LTBP1Q14766 1721 aa10.84□□□□□ -0.67
TDP1-210ENST00000554976 RPS6KA4O75676 772 aa10.84□□□□□ -0.67
TDP1-210ENST00000554976 KCNQ4P56696 695 aa10.84□□□□□ -0.67
TDP1-210ENST00000554976 ANAPC15P60006 121 aa10.84□□□□□ -0.67
TDP1-210ENST00000554976 RABEP1Q15276 862 aa10.84□□□□□ -0.67
TDP1-210ENST00000554976 BCL11BQ9C0K0 894 aaPredicted RBP10.84□□□□□ -0.67
TDP1-210ENST00000554976 ITGA6P23229 1130 aa10.83□□□□□ -0.68
TDP1-210ENST00000554976 TICAM2Q86XR7 235 aa10.83□□□□□ -0.68
TDP1-210ENST00000554976 ANKRD31Q8N7Z5 1873 aa10.83□□□□□ -0.68
TDP1-210ENST00000554976 TRMT112Q9UI30 125 aaKnown RBP10.83□□□□□ -0.68
TDP1-210ENST00000554976 MYH13Q9UKX3 1938 aa10.83□□□□□ -0.68
TDP1-210ENST00000554976 QTRT2Q9H974 415 aaKnown RBP10.82□□□□□ -0.68
TDP1-210ENST00000554976 LRRC4BQ9NT99 713 aa10.82□□□□□ -0.68
TDP1-210ENST00000554976 SH3TC1Q8TE82 1336 aa10.82□□□□□ -0.68
TDP1-210ENST00000554976 FGFR2P21802 821 aa10.82□□□□□ -0.68
TDP1-210ENST00000554976 CCDC57Q2TAC2 916 aa10.82□□□□□ -0.68
TDP1-210ENST00000554976 UTP14AQ9BVJ6 771 aaKnown RBP10.82□□□□□ -0.68
TDP1-210ENST00000554976 BOLA2Q9H3K6 86 aa10.82□□□□□ -0.68
TDP1-210ENST00000554976 NARFQ9UHQ1 456 aa10.82□□□□□ -0.68
TDP1-210ENST00000554976 MAST2Q6P0Q8 1798 aa10.82□□□□□ -0.68
TDP1-210ENST00000554976 A0A1B0GUL7 405 aa10.82□□□□□ -0.68
TDP1-210ENST00000554976 ZNF512BQ96KM6 892 aaPredicted RBP10.82□□□□□ -0.68
TDP1-210ENST00000554976 A0A0D9SFI3 127 aa10.81□□□□□ -0.68
TDP1-210ENST00000554976 PTH1RQ03431 593 aa10.81□□□□□ -0.68
TDP1-210ENST00000554976 NMIQ13287 307 aaPredicted RBP10.81□□□□□ -0.68
TDP1-210ENST00000554976 IFIT5Q13325 482 aaKnown RBP10.81□□□□□ -0.68
TDP1-210ENST00000554976 EDC3Q96F86 508 aaKnown RBP10.81□□□□□ -0.68
TDP1-210ENST00000554976 CHMP3Q9Y3E7 222 aa10.81□□□□□ -0.68
TDP1-210ENST00000554976 EP400Q96L91 3159 aa10.81□□□□□ -0.68
TDP1-210ENST00000554976 K7ELQ4 463 aaPredicted RBP10.81□□□□□ -0.68
TDP1-210ENST00000554976 SLC10A5Q5PT55 438 aa10.81□□□□□ -0.68
TDP1-210ENST00000554976 TBC1D9BQ66K14 1250 aa10.81□□□□□ -0.68
TDP1-210ENST00000554976 SMIM5Q71RC9 77 aa10.81□□□□□ -0.68
TDP1-210ENST00000554976 FAM227BQ96M60 508 aa10.81□□□□□ -0.68
TDP1-210ENST00000554976 ADORA1P30542 326 aa10.8□□□□□ -0.68
TDP1-210ENST00000554976 TIMM10P62072 90 aa10.8□□□□□ -0.68
TDP1-210ENST00000554976 C3orf67Q6ZVT6 689 aa10.8□□□□□ -0.68
TDP1-210ENST00000554976 CCNL1Q9UK58 526 aaPredicted RBP10.8□□□□□ -0.68
TDP1-210ENST00000554976 RPAP1Q9BWH6 1393 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms