RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	IGFLR1	Q9H665	355 aa		9.34	□□□□□ -0.91
PSMC6-208	ENST00000554956	WIZ	O95785	1651 aa		9.33	□□□□□ -0.92
PSMC6-208	ENST00000554956	MARS	P56192	900 aa	Known RBP	9.33	□□□□□ -0.92
PSMC6-208	ENST00000554956	SNRPN	P63162	240 aa	Known RBP	9.33	□□□□□ -0.92
PSMC6-208	ENST00000554956	BTBD6	Q96KE9	485 aa		9.33	□□□□□ -0.92
PSMC6-208	ENST00000554956	MTMR7	Q9Y216	660 aa		9.33	□□□□□ -0.92
PSMC6-208	ENST00000554956	ELOA3C	A0A087WX78	387 aa	Predicted RBP	9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	ELOA3D	A6NLF2	546 aa	Predicted RBP	9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	HOXB4	P17483	251 aa	Predicted RBP	9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	ADH7	P40394	386 aa		9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	EIF1AX	P47813	144 aa	Known RBP	9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	ELOA3B	Q3SY89	546 aa		9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	CHSY3	Q70JA7	882 aa		9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	ELOA3	Q8NG57	546 aa		9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	TNFRSF25	Q93038	417 aa		9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	UBE2O	Q9C0C9	1292 aa	Known RBP	9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	RRAGC	Q9HB90	399 aa		9.32	□□□□□ -0.92
PSMC6-208	ENST00000554956	ADARB2-AS1	A8MUL3	147 aa		9.31	□□□□□ -0.92
PSMC6-208	ENST00000554956	RARA	P10276	462 aa		9.31	□□□□□ -0.92
PSMC6-208	ENST00000554956	ARID4A	P29374	1257 aa	Predicted RBP	9.31	□□□□□ -0.92
PSMC6-208	ENST00000554956	PDE4C	Q08493	712 aa		9.31	□□□□□ -0.92
PSMC6-208	ENST00000554956	NOM1	Q5C9Z4	860 aa	Known RBP	9.31	□□□□□ -0.92
PSMC6-208	ENST00000554956	PIK3R5	Q8WYR1	880 aa		9.31	□□□□□ -0.92
PSMC6-208	ENST00000554956	KIF21A	Q7Z4S6	1674 aa		9.31	□□□□□ -0.92
PSMC6-208	ENST00000554956	RSF1	Q96T23	1441 aa	Predicted RBP	9.31	□□□□□ -0.92
PSMC6-208	ENST00000554956	CNTNAP5	Q8WYK1	1306 aa		9.31	□□□□□ -0.92
PSMC6-208	ENST00000554956	EGFR	P00533	1210 aa		9.3	□□□□□ -0.92
PSMC6-208	ENST00000554956	TXNDC2	Q86VQ3	553 aa		9.3	□□□□□ -0.92
PSMC6-208	ENST00000554956	EDEM1	Q92611	657 aa		9.3	□□□□□ -0.92
PSMC6-208	ENST00000554956	DNAJB12	Q9NXW2	375 aa	Known RBP	9.3	□□□□□ -0.92
PSMC6-208	ENST00000554956	MRC2	Q9UBG0	1479 aa		9.29	□□□□□ -0.92
PSMC6-208	ENST00000554956	UBAP1L	F5GYI3	381 aa		9.29	□□□□□ -0.92
PSMC6-208	ENST00000554956		H3BRB1	525 aa		9.29	□□□□□ -0.92
PSMC6-208	ENST00000554956	FKBP4	Q02790	459 aa	Known RBP eCLIP	9.29	□□□□□ -0.92
PSMC6-208	ENST00000554956	DNM1	Q05193	864 aa	Known RBP	9.29	□□□□□ -0.92
PSMC6-208	ENST00000554956	NUDT16	Q96DE0	195 aa	Known RBP	9.29	□□□□□ -0.92
PSMC6-208	ENST00000554956	TUT1	Q9H6E5	874 aa	Known RBP	9.29	□□□□□ -0.92
PSMC6-208	ENST00000554956	FAM13B	Q9NYF5	915 aa		9.29	□□□□□ -0.92
PSMC6-208	ENST00000554956	SLC6A14	Q9UN76	642 aa		9.29	□□□□□ -0.92
PSMC6-208	ENST00000554956	STARD13	Q9Y3M8	1113 aa		9.29	□□□□□ -0.92
PSMC6-208	ENST00000554956	NPR3	P17342	541 aa		9.28	□□□□□ -0.92
PSMC6-208	ENST00000554956	MLLT1	Q03111	559 aa	Predicted RBP	9.28	□□□□□ -0.92
PSMC6-208	ENST00000554956	SF3B2	Q13435	895 aa	Known RBP	9.28	□□□□□ -0.92
PSMC6-208	ENST00000554956	EFCC1	Q9HA90	598 aa		9.28	□□□□□ -0.92
PSMC6-208	ENST00000554956	NAGPA	Q9UK23	515 aa		9.28	□□□□□ -0.92
PSMC6-208	ENST00000554956	ICMT	O60725	284 aa		9.27	□□□□□ -0.93
PSMC6-208	ENST00000554956	MAP3K6	O95382	1288 aa		9.27	□□□□□ -0.93
PSMC6-208	ENST00000554956	PDGFA	P04085	211 aa		9.27	□□□□□ -0.93
PSMC6-208	ENST00000554956	DGKG	P49619	791 aa		9.27	□□□□□ -0.93
PSMC6-208	ENST00000554956	DHX32	Q7L7V1	743 aa	Known RBP	9.27	□□□□□ -0.93
PSMC6-208	ENST00000554956	C11orf16	Q9NQ32	467 aa		9.27	□□□□□ -0.93
PSMC6-208	ENST00000554956	EGFL7	Q9UHF1	273 aa		9.27	□□□□□ -0.93
PSMC6-208	ENST00000554956		A6NHS1	94 aa		9.26	□□□□□ -0.93
PSMC6-208	ENST00000554956	ZBTB42	B2RXF5	422 aa		9.26	□□□□□ -0.93
PSMC6-208	ENST00000554956	MMP20	O60882	483 aa		9.26	□□□□□ -0.93
PSMC6-208	ENST00000554956	FAM13A	O94988	1023 aa		9.26	□□□□□ -0.93
PSMC6-208	ENST00000554956	BRD1	O95696	1058 aa		9.26	□□□□□ -0.93
PSMC6-208	ENST00000554956	ALB	P02768	609 aa		9.26	□□□□□ -0.93
PSMC6-208	ENST00000554956	ALAS2	P22557	587 aa		9.26	□□□□□ -0.93
PSMC6-208	ENST00000554956	AAMP	Q13685	434 aa		9.26	□□□□□ -0.93
PSMC6-208	ENST00000554956	C8orf86	Q6ZUL3	223 aa		9.26	□□□□□ -0.93
PSMC6-208	ENST00000554956	WDR62	O43379	1518 aa		9.26	□□□□□ -0.93
PSMC6-208	ENST00000554956	FZD6	O60353	706 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	IRS1	P35568	1242 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	ECM1	Q16610	540 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	PODN	Q7Z5L7	613 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	NLRP13	Q86W25	1043 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	GLYCTK	Q8IVS8	523 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	SCARF2	Q96GP6	870 aa	Predicted RBP	9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	GGNBP2	Q9H3C7	697 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	CCDC87	Q9NVE4	849 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	POLI	Q9UNA4	740 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	CFTR	P13569	1480 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	FANCD2	Q9BXW9	1451 aa		9.25	□□□□□ -0.93
PSMC6-208	ENST00000554956	MZF1	P28698	734 aa	Predicted RBP	9.24	□□□□□ -0.93
PSMC6-208	ENST00000554956	GSK3A	P49840	483 aa		9.24	□□□□□ -0.93
PSMC6-208	ENST00000554956	ALKBH2	Q6NS38	261 aa		9.24	□□□□□ -0.93
PSMC6-208	ENST00000554956	LINC00114	Q6XXX2	140 aa		9.24	□□□□□ -0.93
PSMC6-208	ENST00000554956	HFE2	Q6ZVN8	426 aa		9.24	□□□□□ -0.93
PSMC6-208	ENST00000554956	TLR7	Q9NYK1	1049 aa	Known RBP	9.24	□□□□□ -0.93
PSMC6-208	ENST00000554956	CEP164	Q9UPV0	1460 aa		9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956		M0R082	166 aa		9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	CPB1	P15086	417 aa		9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	C8orf34	Q49A92	452 aa		9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	FAM35A	Q86V20	835 aa		9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	BEND7	Q8N7W2	519 aa	Predicted RBP	9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	ZNF417	Q8TAU3	575 aa		9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	CCER1	Q8TC90	406 aa	Predicted RBP	9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	NSUN5	Q96P11	429 aa	Known RBP	9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	ZNF587	Q96SQ5	575 aa	Predicted RBP	9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	TMEM63C	Q9P1W3	806 aa		9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	MKL2	Q9ULH7	1088 aa		9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	FNDC3A	Q9Y2H6	1198 aa	Known RBP	9.23	□□□□□ -0.93
PSMC6-208	ENST00000554956	GPLD1	P80108	840 aa		9.22	□□□□□ -0.93
PSMC6-208	ENST00000554956	PSAPL1	Q6NUJ1	521 aa		9.22	□□□□□ -0.93
PSMC6-208	ENST00000554956	MICALL1	Q8N3F8	863 aa		9.22	□□□□□ -0.93
PSMC6-208	ENST00000554956	TRPM4	Q8TD43	1214 aa		9.22	□□□□□ -0.93
PSMC6-208	ENST00000554956	NUDT8	Q8WV74	236 aa		9.22	□□□□□ -0.93
PSMC6-208	ENST00000554956	TRAIP	Q9BWF2	469 aa		9.22	□□□□□ -0.93
PSMC6-208	ENST00000554956	SUV39H2	Q9H5I1	410 aa		9.22	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms