RNA–Protein interactions for RNA: ENST00000554947.5

SDR39U1-209, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,203 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-209ENST00000554947 BCAR3O75815 825 aa30.65■■■□□ 2.5
SDR39U1-209ENST00000554947 GRAPQ13588 217 aa30.65■■■□□ 2.5
SDR39U1-209ENST00000554947 GRIPAP1Q4V328 841 aa30.65■■■□□ 2.5
SDR39U1-209ENST00000554947 GRAPLQ8TC17 118 aaPredicted RBP30.65■■■□□ 2.5
SDR39U1-209ENST00000554947 CCDC88AQ3V6T2 1871 aa30.64■■■□□ 2.5
SDR39U1-209ENST00000554947 CTSWP56202 376 aa30.64■■■□□ 2.5
SDR39U1-209ENST00000554947 CCDC93Q567U6 631 aa30.64■■■□□ 2.5
SDR39U1-209ENST00000554947 TMC4Q7Z404 712 aa30.64■■■□□ 2.5
SDR39U1-209ENST00000554947 C9orf78Q9NZ63 289 aaPredicted RBP30.64■■■□□ 2.5
SDR39U1-209ENST00000554947 LTBP3Q9NS15 1303 aa30.64■■■□□ 2.5
SDR39U1-209ENST00000554947 PPEF1O14829 653 aaPredicted RBP30.63■■■□□ 2.49
SDR39U1-209ENST00000554947 CCT4P50991 539 aaKnown RBP30.63■■■□□ 2.49
SDR39U1-209ENST00000554947 UTYO14607 1347 aa30.63■■■□□ 2.49
SDR39U1-209ENST00000554947 RTKN2Q8IZC4 609 aa30.62■■■□□ 2.49
SDR39U1-209ENST00000554947 ZNF219Q9P2Y4 722 aaPredicted RBP30.62■■■□□ 2.49
SDR39U1-209ENST00000554947 RTL9Q8NET4 1388 aa30.62■■■□□ 2.49
SDR39U1-209ENST00000554947 TTLL11Q8NHH1 800 aa30.61■■■□□ 2.49
SDR39U1-209ENST00000554947 DICER1Q9UPY3 1922 aaKnown RBP30.61■■■□□ 2.49
SDR39U1-209ENST00000554947 ATF7IPQ6VMQ6 1270 aa30.6■■■□□ 2.49
SDR39U1-209ENST00000554947 ATP6V0A2Q9Y487 856 aa30.6■■■□□ 2.49
SDR39U1-209ENST00000554947 SNED1Q8TER0 1413 aa30.59■■■□□ 2.49
SDR39U1-209ENST00000554947 NFKBIEO00221 500 aa30.59■■■□□ 2.49
SDR39U1-209ENST00000554947 TMX4Q9H1E5 349 aaPredicted RBP30.59■■■□□ 2.49
SDR39U1-209ENST00000554947 LRRC37AA6NMS7 1700 aa30.59■■■□□ 2.49
SDR39U1-209ENST00000554947 CSF1RP07333 972 aa30.58■■■□□ 2.49
SDR39U1-209ENST00000554947 YY1P25490 414 aa30.58■■■□□ 2.49
SDR39U1-209ENST00000554947 SP8Q8IXZ3 490 aa30.58■■■□□ 2.49
SDR39U1-209ENST00000554947 TRIM27P14373 513 aa30.57■■■□□ 2.48
SDR39U1-209ENST00000554947 ZKSCAN2Q63HK3 967 aa30.57■■■□□ 2.48
SDR39U1-209ENST00000554947 TAOK3Q9H2K8 898 aa30.57■■■□□ 2.48
SDR39U1-209ENST00000554947 LMNB1P20700 586 aa30.56■■■□□ 2.48
SDR39U1-209ENST00000554947 RPS8P62241 208 aaKnown RBP30.56■■■□□ 2.48
SDR39U1-209ENST00000554947 FRAT1Q92837 279 aaPredicted RBP30.56■■■□□ 2.48
SDR39U1-209ENST00000554947 CELF1Q92879 486 aaKnown RBP30.56■■■□□ 2.48
SDR39U1-209ENST00000554947 FKBP4Q02790 459 aaKnown RBP eCLIP30.55■■■□□ 2.48
SDR39U1-209ENST00000554947 RASSF7Q02833 373 aa30.55■■■□□ 2.48
SDR39U1-209ENST00000554947 INTS3Q68E01 1043 aaKnown RBP30.55■■■□□ 2.48
SDR39U1-209ENST00000554947 PSMD1Q99460 953 aa30.55■■■□□ 2.48
SDR39U1-209ENST00000554947 USP44Q9H0E7 712 aa30.55■■■□□ 2.48
SDR39U1-209ENST00000554947 FOXO4P98177 505 aa30.54■■■□□ 2.48
SDR39U1-209ENST00000554947 CDC5LQ99459 802 aaKnown RBP30.54■■■□□ 2.48
SDR39U1-209ENST00000554947 SEC31BQ9NQW1 1179 aa30.54■■■□□ 2.48
SDR39U1-209ENST00000554947 NBPF7P0C2Y1 421 aaPredicted RBP30.53■■■□□ 2.48
SDR39U1-209ENST00000554947 OLFM4Q6UX06 510 aa30.53■■■□□ 2.48
SDR39U1-209ENST00000554947 GREM2Q9H772 168 aa30.53■■■□□ 2.48
SDR39U1-209ENST00000554947 C9orf131Q5VYM1 1079 aa30.52■■■□□ 2.48
SDR39U1-209ENST00000554947 YTHDC1Q96MU7 727 aaKnown RBP30.52■■■□□ 2.48
SDR39U1-209ENST00000554947 COL4A1P02462 1669 aa30.52■■■□□ 2.48
SDR39U1-209ENST00000554947 ZC3H4Q9UPT8 1303 aaKnown RBP30.51■■■□□ 2.48
SDR39U1-209ENST00000554947 ANKRD18AQ8IVF6 992 aa30.51■■■□□ 2.47
SDR39U1-209ENST00000554947 CCDC85AQ96PX6 553 aaPredicted RBP30.51■■■□□ 2.47
SDR39U1-209ENST00000554947 RCAN3Q9UKA8 241 aa30.51■■■□□ 2.47
SDR39U1-209ENST00000554947 RNF181Q9P0P0 153 aa30.5■■■□□ 2.47
SDR39U1-209ENST00000554947 PRELPP51888 382 aa30.49■■■□□ 2.47
SDR39U1-209ENST00000554947 SUCLG2Q96I99 432 aa30.49■■■□□ 2.47
SDR39U1-209ENST00000554947 HDAC5Q9UQL6 1122 aa30.49■■■□□ 2.47
SDR39U1-209ENST00000554947 SPEF2Q9C093 1822 aa30.49■■■□□ 2.47
SDR39U1-209ENST00000554947 ITGA6P23229 1130 aa30.48■■■□□ 2.47
SDR39U1-209ENST00000554947 FAM161AQ3B820 660 aa30.48■■■□□ 2.47
SDR39U1-209ENST00000554947 EPHA10Q5JZY3 1008 aa30.48■■■□□ 2.47
SDR39U1-209ENST00000554947 KAZALD1Q96I82 304 aa30.48■■■□□ 2.47
SDR39U1-209ENST00000554947 RTFDC1Q9BY42 306 aaPredicted RBP30.48■■■□□ 2.47
SDR39U1-209ENST00000554947 LMBR1LQ6UX01 489 aa30.47■■■□□ 2.47
SDR39U1-209ENST00000554947 MPNDQ8N594 471 aa30.47■■■□□ 2.47
SDR39U1-209ENST00000554947 VPS33BQ9H267 617 aa30.47■■■□□ 2.47
SDR39U1-209ENST00000554947 TIAM2Q8IVF5 1701 aa30.47■■■□□ 2.47
SDR39U1-209ENST00000554947 RABL6Q3YEC7 729 aaPredicted RBP30.46■■■□□ 2.47
SDR39U1-209ENST00000554947 SUPT20HQ8NEM7 779 aa30.46■■■□□ 2.47
SDR39U1-209ENST00000554947 BSDC1Q9NW68 430 aaPredicted RBP30.46■■■□□ 2.47
SDR39U1-209ENST00000554947 LTBP1Q14766 1721 aa30.46■■■□□ 2.47
SDR39U1-209ENST00000554947 ANKRD18BA2A2Z9 1011 aa30.45■■■□□ 2.47
SDR39U1-209ENST00000554947 IFIT5Q13325 482 aaKnown RBP30.45■■■□□ 2.47
SDR39U1-209ENST00000554947 DPP8Q6V1X1 898 aaPredicted RBP30.45■■■□□ 2.47
SDR39U1-209ENST00000554947 DZIP1LQ8IYY4 767 aaKnown RBP30.45■■■□□ 2.47
SDR39U1-209ENST00000554947 UBTFL1P0CB47 393 aaPredicted RBP30.44■■■□□ 2.46
SDR39U1-209ENST00000554947 MS4A1P11836 297 aa30.44■■■□□ 2.46
SDR39U1-209ENST00000554947 IGHMBP2P38935 993 aaKnown RBP30.44■■■□□ 2.46
SDR39U1-209ENST00000554947 CLUAP1Q96AJ1 413 aa30.44■■■□□ 2.46
SDR39U1-209ENST00000554947 TNNQ9UQP3 1299 aa30.44■■■□□ 2.46
SDR39U1-209ENST00000554947 GNAI3P08754 354 aa30.43■■■□□ 2.46
SDR39U1-209ENST00000554947 SLC51AQ86UW1 340 aa30.43■■■□□ 2.46
SDR39U1-209ENST00000554947 FTSJ3Q8IY81 847 aaKnown RBP30.43■■■□□ 2.46
SDR39U1-209ENST00000554947 BICC1Q9H694 974 aaKnown RBP30.43■■■□□ 2.46
SDR39U1-209ENST00000554947 ZNF277Q9NRM2 450 aaPredicted RBP30.43■■■□□ 2.46
SDR39U1-209ENST00000554947 PODXL2Q9NZ53 605 aa30.43■■■□□ 2.46
SDR39U1-209ENST00000554947 IARSP41252 1262 aaKnown RBP30.42■■■□□ 2.46
SDR39U1-209ENST00000554947 CCDC57Q2TAC2 916 aa30.42■■■□□ 2.46
SDR39U1-209ENST00000554947 CHMP3Q9Y3E7 222 aa30.42■■■□□ 2.46
SDR39U1-209ENST00000554947 TMEM57Q8N5G2 664 aa30.41■■■□□ 2.46
SDR39U1-209ENST00000554947 ANKRD44Q8N8A2 993 aa30.41■■■□□ 2.46
SDR39U1-209ENST00000554947 DUOX1Q9NRD9 1551 aa30.41■■■□□ 2.46
SDR39U1-209ENST00000554947 MPHOSPH8Q99549 860 aa30.4■■■□□ 2.46
SDR39U1-209ENST00000554947 GPSM2P81274 684 aa30.39■■■□□ 2.46
SDR39U1-209ENST00000554947 MEIS3Q99687 375 aa30.39■■■□□ 2.46
SDR39U1-209ENST00000554947 NSFL1CQ9UNZ2 370 aaKnown RBP30.39■■■□□ 2.46
SDR39U1-209ENST00000554947 ZNF784Q8NCA9 323 aaPredicted RBP30.38■■■□□ 2.45
SDR39U1-209ENST00000554947 MINPP1Q9UNW1 487 aa30.38■■■□□ 2.45
SDR39U1-209ENST00000554947 XDHP47989 1333 aa30.37■■■□□ 2.45
SDR39U1-209ENST00000554947 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.36■■■□□ 2.45
SDR39U1-209ENST00000554947 ANKIB1Q9P2G1 1089 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms