RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 GRAPQ13588 217 aa18.27■□□□□ 0.52
XRCC3-207ENST00000554774 GRAPLQ8TC17 118 aaPredicted RBP18.27■□□□□ 0.52
XRCC3-207ENST00000554774 WDR33Q9C0J8 1336 aaKnown RBP18.26■□□□□ 0.51
XRCC3-207ENST00000554774 PRDM10Q9NQV6 1147 aa18.26■□□□□ 0.51
XRCC3-207ENST00000554774 ADARB2Q9NS39 739 aaKnown RBP18.26■□□□□ 0.51
XRCC3-207ENST00000554774 WBP1LQ9NX94 342 aa18.26■□□□□ 0.51
XRCC3-207ENST00000554774 GPRC5DQ9NZD1 345 aa18.26■□□□□ 0.51
XRCC3-207ENST00000554774 ADAMTS8Q9UP79 889 aa18.26■□□□□ 0.51
XRCC3-207ENST00000554774 TRPM7Q96QT4 1865 aa18.25■□□□□ 0.51
XRCC3-207ENST00000554774 GMPSP49915 693 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-207ENST00000554774 CIAPIN1Q6FI81 312 aa18.25■□□□□ 0.51
XRCC3-207ENST00000554774 ANKRD13DQ6ZTN6 518 aa18.25■□□□□ 0.51
XRCC3-207ENST00000554774 PAXIP1Q6ZW49 1069 aaPredicted RBP18.25■□□□□ 0.51
XRCC3-207ENST00000554774 PLBD2Q8NHP8 589 aa18.25■□□□□ 0.51
XRCC3-207ENST00000554774 TRAF5O00463 557 aa18.24■□□□□ 0.51
XRCC3-207ENST00000554774 RAD17O75943 681 aa18.24■□□□□ 0.51
XRCC3-207ENST00000554774 HOXB7P09629 217 aa18.24■□□□□ 0.51
XRCC3-207ENST00000554774 KIAA2012Q0VF49 1180 aa18.24■□□□□ 0.51
XRCC3-207ENST00000554774 BCL2L13Q9BXK5 485 aa18.24■□□□□ 0.51
XRCC3-207ENST00000554774 DBF4Q9UBU7 674 aaPredicted RBP18.24■□□□□ 0.51
XRCC3-207ENST00000554774 DDX60Q8IY21 1712 aaKnown RBP18.23■□□□□ 0.51
XRCC3-207ENST00000554774 ATP5J2-PTCD1G3V325 749 aa18.23■□□□□ 0.51
XRCC3-207ENST00000554774 TMC4Q7Z404 712 aa18.23■□□□□ 0.51
XRCC3-207ENST00000554774 FAM89AQ96GI7 184 aa18.23■□□□□ 0.51
XRCC3-207ENST00000554774 ISCA1Q9BUE6 129 aa18.23■□□□□ 0.51
XRCC3-207ENST00000554774 LBX1P52954 281 aa18.22■□□□□ 0.51
XRCC3-207ENST00000554774 MAP2K1Q02750 393 aaPredicted RBP18.22■□□□□ 0.51
XRCC3-207ENST00000554774 GRM1Q13255 1194 aa18.22■□□□□ 0.51
XRCC3-207ENST00000554774 TNIP1Q15025 636 aa18.22■□□□□ 0.51
XRCC3-207ENST00000554774 DUSP27Q5VZP5 1158 aa18.22■□□□□ 0.51
XRCC3-207ENST00000554774 CFAP44Q96MT7 982 aa18.22■□□□□ 0.51
XRCC3-207ENST00000554774 HYPKQ9NX55 129 aa18.22■□□□□ 0.51
XRCC3-207ENST00000554774 RTL5Q5HYW3 569 aaPredicted RBP18.21■□□□□ 0.51
XRCC3-207ENST00000554774 CST9Q5W186 159 aa18.21■□□□□ 0.51
XRCC3-207ENST00000554774 CAPNS2Q96L46 248 aa18.21■□□□□ 0.51
XRCC3-207ENST00000554774 ECE1P42892 770 aa18.2■□□□□ 0.5
XRCC3-207ENST00000554774 CYP4F22Q6NT55 531 aa18.2■□□□□ 0.5
XRCC3-207ENST00000554774 CELF1Q92879 486 aaKnown RBP18.2■□□□□ 0.5
XRCC3-207ENST00000554774 MBIPQ9NS73 344 aa18.2■□□□□ 0.5
XRCC3-207ENST00000554774 LRRC37AA6NMS7 1700 aa18.2■□□□□ 0.5
XRCC3-207ENST00000554774 CDHR2Q9BYE9 1310 aa18.2■□□□□ 0.5
XRCC3-207ENST00000554774 YDJCA8MPS7 323 aa18.19■□□□□ 0.5
XRCC3-207ENST00000554774 HSPA8P11142 646 aaKnown RBP18.19■□□□□ 0.5
XRCC3-207ENST00000554774 SF3B3Q15393 1217 aaKnown RBP18.19■□□□□ 0.5
XRCC3-207ENST00000554774 DUOX1Q9NRD9 1551 aa18.19■□□□□ 0.5
XRCC3-207ENST00000554774 NSFL1CQ9UNZ2 370 aaKnown RBP18.19■□□□□ 0.5
XRCC3-207ENST00000554774 TLL2Q9Y6L7 1015 aa18.19■□□□□ 0.5
XRCC3-207ENST00000554774 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
XRCC3-207ENST00000554774 CELF2O95319 508 aaKnown RBP18.18■□□□□ 0.5
XRCC3-207ENST00000554774 WASHC4Q2M389 1173 aa18.18■□□□□ 0.5
XRCC3-207ENST00000554774 RIC3Q7Z5B4 369 aa18.18■□□□□ 0.5
XRCC3-207ENST00000554774 GPR101Q96P66 508 aaPredicted RBP18.18■□□□□ 0.5
XRCC3-207ENST00000554774 GLIS2Q9BZE0 524 aaPredicted RBP18.18■□□□□ 0.5
XRCC3-207ENST00000554774 CNOT7Q9UIV1 285 aaKnown RBP18.18■□□□□ 0.5
XRCC3-207ENST00000554774 C6orf229H3BNL8 230 aa18.17■□□□□ 0.5
XRCC3-207ENST00000554774 H7C1D1 291 aa18.17■□□□□ 0.5
XRCC3-207ENST00000554774 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
XRCC3-207ENST00000554774 HIRAP54198 1017 aaPredicted RBP18.17■□□□□ 0.5
XRCC3-207ENST00000554774 TRPM4Q8TD43 1214 aa18.17■□□□□ 0.5
XRCC3-207ENST00000554774 BEGAINQ9BUH8 593 aa18.17■□□□□ 0.5
XRCC3-207ENST00000554774 PRKRIP1Q9H875 184 aaPredicted RBP18.17■□□□□ 0.5
XRCC3-207ENST00000554774 DBNDD1Q9H9R9 158 aa18.17■□□□□ 0.5
XRCC3-207ENST00000554774 PGAP2Q9UHJ9 254 aa18.17■□□□□ 0.5
XRCC3-207ENST00000554774 THSD7BQ9C0I4 1608 aa18.16■□□□□ 0.5
XRCC3-207ENST00000554774 SHTN1A0MZ66 631 aa18.16■□□□□ 0.5
XRCC3-207ENST00000554774 ELL2O00472 640 aaPredicted RBP18.16■□□□□ 0.5
XRCC3-207ENST00000554774 APAF1O14727 1248 aa18.16■□□□□ 0.5
XRCC3-207ENST00000554774 ZNF853P0CG23 659 aa18.16■□□□□ 0.5
XRCC3-207ENST00000554774 GOLGA2Q08379 1002 aa18.16■□□□□ 0.5
XRCC3-207ENST00000554774 TRIM28Q13263 835 aaKnown RBP18.16■□□□□ 0.5
XRCC3-207ENST00000554774 ZC3H15Q8WU90 426 aaKnown RBP18.16■□□□□ 0.5
XRCC3-207ENST00000554774 ZNF408Q9H9D4 720 aa18.16■□□□□ 0.5
XRCC3-207ENST00000554774 ZBTB12Q9Y330 459 aaPredicted RBP18.16■□□□□ 0.5
XRCC3-207ENST00000554774 COL4A1P02462 1669 aa18.15■□□□□ 0.5
XRCC3-207ENST00000554774 PSMD14O00487 310 aa18.15■□□□□ 0.5
XRCC3-207ENST00000554774 AOC2O75106 756 aa18.15■□□□□ 0.5
XRCC3-207ENST00000554774 GNAI1P63096 354 aa18.15■□□□□ 0.5
XRCC3-207ENST00000554774 GPSM2P81274 684 aa18.15■□□□□ 0.5
XRCC3-207ENST00000554774 MICALL2Q8IY33 904 aa18.15■□□□□ 0.5
XRCC3-207ENST00000554774 PHAXQ9H814 394 aaKnown RBP18.15■□□□□ 0.5
XRCC3-207ENST00000554774 IFT57Q9NWB7 429 aa18.15■□□□□ 0.5
XRCC3-207ENST00000554774 POLLQ9UGP5 575 aa18.15■□□□□ 0.5
XRCC3-207ENST00000554774 RPS8P62241 208 aaKnown RBP18.14■□□□□ 0.49
XRCC3-207ENST00000554774 CALD1Q05682 793 aaKnown RBP18.14■□□□□ 0.49
XRCC3-207ENST00000554774 CDC37L1Q7L3B6 337 aa18.14■□□□□ 0.49
XRCC3-207ENST00000554774 SAPCD2Q86UD0 394 aa18.14■□□□□ 0.49
XRCC3-207ENST00000554774 EYA3Q99504 573 aa18.14■□□□□ 0.49
XRCC3-207ENST00000554774 MYD88Q99836 296 aa18.14■□□□□ 0.49
XRCC3-207ENST00000554774 DOK7Q18PE1 504 aa18.13■□□□□ 0.49
XRCC3-207ENST00000554774 ZBTB38Q8NAP3 1195 aaPredicted RBP18.13■□□□□ 0.49
XRCC3-207ENST00000554774 DPF2Q92785 391 aa18.13■□□□□ 0.49
XRCC3-207ENST00000554774 ECE2O60344 883 aa18.12■□□□□ 0.49
XRCC3-207ENST00000554774 MAP2K2P36507 400 aa18.12■□□□□ 0.49
XRCC3-207ENST00000554774 SAMD7Q7Z3H4 446 aa18.12■□□□□ 0.49
XRCC3-207ENST00000554774 USP48Q86UV5 1035 aa18.12■□□□□ 0.49
XRCC3-207ENST00000554774 TBC1D16Q8TBP0 767 aa18.12■□□□□ 0.49
XRCC3-207ENST00000554774 SEC31BQ9NQW1 1179 aa18.12■□□□□ 0.49
XRCC3-207ENST00000554774 HSP90B1P14625 803 aaKnown RBP18.11■□□□□ 0.49
XRCC3-207ENST00000554774 TBC1D10BQ4KMP7 808 aaPredicted RBP18.11■□□□□ 0.49
XRCC3-207ENST00000554774 C8orf58Q8NAV2 365 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms