RNA–Protein interactions for RNA: ENST00000554627.5

MARK3-208, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-208	ENST00000554627	ERFE	Q4G0M1	354 aa		12	□□□□□ -0.49
MARK3-208	ENST00000554627	CCDC152	Q4G0S7	254 aa		12	□□□□□ -0.49
MARK3-208	ENST00000554627	PRR5L	Q6MZQ0	368 aa		12	□□□□□ -0.49
MARK3-208	ENST00000554627	JARID2	Q92833	1246 aa	Predicted RBP	12	□□□□□ -0.49
MARK3-208	ENST00000554627	KAZALD1	Q96I82	304 aa		12	□□□□□ -0.49
MARK3-208	ENST00000554627	CHMP3	Q9Y3E7	222 aa		12	□□□□□ -0.49
MARK3-208	ENST00000554627	RTL9	Q8NET4	1388 aa		12	□□□□□ -0.49
MARK3-208	ENST00000554627	POLD1	P28340	1107 aa		11.99	□□□□□ -0.49
MARK3-208	ENST00000554627	LMBR1L	Q6UX01	489 aa		11.99	□□□□□ -0.49
MARK3-208	ENST00000554627	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.99	□□□□□ -0.49
MARK3-208	ENST00000554627	SSH3	Q8TE77	659 aa		11.99	□□□□□ -0.49
MARK3-208	ENST00000554627	NLRP3	Q96P20	1036 aa		11.99	□□□□□ -0.49
MARK3-208	ENST00000554627	BRCA1	P38398	1863 aa	Known RBP	11.98	□□□□□ -0.49
MARK3-208	ENST00000554627	CSF1R	P07333	972 aa		11.98	□□□□□ -0.49
MARK3-208	ENST00000554627	HCLS1	P14317	486 aa	Predicted RBP	11.98	□□□□□ -0.49
MARK3-208	ENST00000554627	POLA2	Q14181	598 aa		11.98	□□□□□ -0.49
MARK3-208	ENST00000554627	CCDC57	Q2TAC2	916 aa		11.98	□□□□□ -0.49
MARK3-208	ENST00000554627	HSP90AB4P	Q58FF6	505 aa		11.98	□□□□□ -0.49
MARK3-208	ENST00000554627	EPHA10	Q5JZY3	1008 aa		11.98	□□□□□ -0.49
MARK3-208	ENST00000554627	GCC1	Q96CN9	775 aa		11.98	□□□□□ -0.49
MARK3-208	ENST00000554627	PNMA6E	A0A0J9YXQ4	647 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	LRRC37A	A6NMS7	1700 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	IFIT5	Q13325	482 aa	Known RBP	11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	B4GALNT3	Q6L9W6	998 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	SYNE4	Q8N205	404 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	TTLL11	Q8NHH1	800 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	CNKSR2	Q8WXI2	1034 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	PDZRN3	Q9UPQ7	1066 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	AK9	Q5TCS8	1911 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	MYH13	Q9UKX3	1938 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	ARAP2	Q8WZ64	1704 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	C10orf71	Q711Q0	1435 aa		11.97	□□□□□ -0.49
MARK3-208	ENST00000554627	ANKRD18B	A2A2Z9	1011 aa		11.96	□□□□□ -0.49
MARK3-208	ENST00000554627	PDE6B	P35913	854 aa		11.96	□□□□□ -0.49
MARK3-208	ENST00000554627	SF3B3	Q15393	1217 aa	Known RBP	11.96	□□□□□ -0.49
MARK3-208	ENST00000554627	TAF7L	Q5H9L4	462 aa		11.96	□□□□□ -0.49
MARK3-208	ENST00000554627	SIRT2	Q8IXJ6	389 aa		11.96	□□□□□ -0.49
MARK3-208	ENST00000554627	BRIP1	Q9BX63	1249 aa		11.96	□□□□□ -0.49
MARK3-208	ENST00000554627	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.96	□□□□□ -0.49
MARK3-208	ENST00000554627	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.96	□□□□□ -0.49
MARK3-208	ENST00000554627	KIAA1551	Q9HCM1	1747 aa		11.96	□□□□□ -0.49
MARK3-208	ENST00000554627	KDM2B	Q8NHM5	1336 aa		11.96	□□□□□ -0.5
MARK3-208	ENST00000554627	PSD	A5PKW4	1024 aa	Predicted RBP	11.96	□□□□□ -0.5
MARK3-208	ENST00000554627	FAM161A	Q3B820	660 aa		11.96	□□□□□ -0.5
MARK3-208	ENST00000554627	ERC1	Q8IUD2	1116 aa		11.96	□□□□□ -0.5
MARK3-208	ENST00000554627	CDC5L	Q99459	802 aa	Known RBP	11.96	□□□□□ -0.5
MARK3-208	ENST00000554627	DCTPP1	Q9H773	170 aa		11.96	□□□□□ -0.5
MARK3-208	ENST00000554627	COPRS	Q9NQ92	184 aa		11.96	□□□□□ -0.5
MARK3-208	ENST00000554627	FBXO3	Q9UK99	471 aa		11.96	□□□□□ -0.5
MARK3-208	ENST00000554627	ZBTB7A	O95365	584 aa		11.95	□□□□□ -0.5
MARK3-208	ENST00000554627	ITGA6	P23229	1130 aa		11.95	□□□□□ -0.5
MARK3-208	ENST00000554627	OS9	Q13438	667 aa	Predicted RBP	11.95	□□□□□ -0.5
MARK3-208	ENST00000554627	RPGR	Q92834	1020 aa	Known RBP	11.95	□□□□□ -0.5
MARK3-208	ENST00000554627	GREM2	Q9H772	168 aa		11.95	□□□□□ -0.5
MARK3-208	ENST00000554627	SOCS7	O14512	581 aa		11.94	□□□□□ -0.5
MARK3-208	ENST00000554627	RAB11FIP3	O75154	756 aa		11.94	□□□□□ -0.5
MARK3-208	ENST00000554627	SURF6	O75683	361 aa	Known RBP	11.94	□□□□□ -0.5
MARK3-208	ENST00000554627	IGHD	P01880	384 aa		11.94	□□□□□ -0.5
MARK3-208	ENST00000554627	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
MARK3-208	ENST00000554627	CRY2	Q49AN0	593 aa		11.94	□□□□□ -0.5
MARK3-208	ENST00000554627	DDX46	Q7L014	1031 aa	Known RBP	11.94	□□□□□ -0.5
MARK3-208	ENST00000554627	SMC5	Q8IY18	1101 aa		11.94	□□□□□ -0.5
MARK3-208	ENST00000554627	NOP58	Q9Y2X3	529 aa	Known RBP	11.94	□□□□□ -0.5
MARK3-208	ENST00000554627	KLRG2	A4D1S0	409 aa	Predicted RBP	11.93	□□□□□ -0.5
MARK3-208	ENST00000554627	CIAO1	O76071	339 aa		11.93	□□□□□ -0.5
MARK3-208	ENST00000554627	IGHMBP2	P38935	993 aa	Known RBP	11.93	□□□□□ -0.5
MARK3-208	ENST00000554627	RFX5	P48382	616 aa	Predicted RBP	11.93	□□□□□ -0.5
MARK3-208	ENST00000554627	PTPN12	Q05209	780 aa	Known RBP	11.93	□□□□□ -0.5
MARK3-208	ENST00000554627	RBM17	Q96I25	401 aa	Known RBP	11.93	□□□□□ -0.5
MARK3-208	ENST00000554627	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.93	□□□□□ -0.5
MARK3-208	ENST00000554627	RNF216	Q9NWF9	866 aa	Predicted RBP	11.93	□□□□□ -0.5
MARK3-208	ENST00000554627	ARFGEF1	Q9Y6D6	1849 aa		11.93	□□□□□ -0.5
MARK3-208	ENST00000554627	ANKRD18A	Q8IVF6	992 aa		11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	CCDC24	Q8N4L8	307 aa		11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	MPHOSPH8	Q99549	860 aa		11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	SPON1	Q9HCB6	807 aa		11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	ATF5	Q9Y2D1	282 aa	Predicted RBP	11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	EXOC6B	Q9Y2D4	811 aa		11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	SLX4	Q8IY92	1834 aa		11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	IL15	P40933	162 aa	Predicted RBP	11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	TMC4	Q7Z404	712 aa		11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	KIF1BP	Q96EK5	621 aa		11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	LRRCC1	Q9C099	1032 aa		11.92	□□□□□ -0.5
MARK3-208	ENST00000554627	CNNM1	Q9NRU3	951 aa		11.92	□□□□□ -0.5
MARK3-208	ENST00000554627		H0YIN7	160 aa		11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	EYA2	O00167	538 aa		11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	NPR1	P16066	1061 aa		11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	ALDH1B1	P30837	517 aa		11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	HOXA10	P31260	410 aa	Predicted RBP	11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	LDHAL6A	Q6ZMR3	332 aa		11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	C3orf67	Q6ZVT6	689 aa		11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	MASTL	Q96GX5	879 aa		11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	CRAMP1	Q96RY5	1269 aa		11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	SIL1	Q9H173	461 aa		11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	PA2G4	Q9UQ80	394 aa	Known RBP	11.91	□□□□□ -0.5
MARK3-208	ENST00000554627	MROH5	Q6ZUA9	1318 aa		11.9	□□□□□ -0.5
MARK3-208	ENST00000554627	GRAP	Q13588	217 aa		11.9	□□□□□ -0.5
MARK3-208	ENST00000554627	KLHDC4	Q8TBB5	520 aa		11.9	□□□□□ -0.5
MARK3-208	ENST00000554627	GRAPL	Q8TC17	118 aa	Predicted RBP	11.9	□□□□□ -0.5
MARK3-208	ENST00000554627	SEC31B	Q9NQW1	1179 aa		11.9	□□□□□ -0.5

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