RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 PI4KAP2A4QPH2 592 aa11.19□□□□□ -0.62
ACTN1-213ENST00000554508 IQCA1LA6NCM1 817 aa11.19□□□□□ -0.62
ACTN1-213ENST00000554508 SLC4A2P04920 1241 aa11.19□□□□□ -0.62
ACTN1-213ENST00000554508 PCCAP05165 728 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-213ENST00000554508 EIF6P56537 245 aaKnown RBP11.19□□□□□ -0.62
ACTN1-213ENST00000554508 NEXNQ0ZGT2 675 aa11.19□□□□□ -0.62
ACTN1-213ENST00000554508 RTL5Q5HYW3 569 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-213ENST00000554508 LARGE2Q8N3Y3 721 aa11.19□□□□□ -0.62
ACTN1-213ENST00000554508 MPNDQ8N594 471 aa11.19□□□□□ -0.62
ACTN1-213ENST00000554508 PI4KAP1Q8N8J0 262 aa11.19□□□□□ -0.62
ACTN1-213ENST00000554508 RTFDC1Q9BY42 306 aaPredicted RBP11.19□□□□□ -0.62
ACTN1-213ENST00000554508 MYH16Q9H6N6 1097 aa11.19□□□□□ -0.62
ACTN1-213ENST00000554508 VAMP4O75379 141 aa11.18□□□□□ -0.62
ACTN1-213ENST00000554508 EXOSC9Q06265 439 aaKnown RBP11.18□□□□□ -0.62
ACTN1-213ENST00000554508 DPP8Q6V1X1 898 aaPredicted RBP11.18□□□□□ -0.62
ACTN1-213ENST00000554508 GPC2Q8N158 579 aa11.18□□□□□ -0.62
ACTN1-213ENST00000554508 ZNF428Q96B54 188 aa11.18□□□□□ -0.62
ACTN1-213ENST00000554508 ZNF541Q9H0D2 1346 aa11.17□□□□□ -0.62
ACTN1-213ENST00000554508 PPIP5K2O43314 1243 aa11.17□□□□□ -0.62
ACTN1-213ENST00000554508 PDE8AO60658 829 aa11.17□□□□□ -0.62
ACTN1-213ENST00000554508 G2E3Q7L622 706 aa11.17□□□□□ -0.62
ACTN1-213ENST00000554508 HACL1Q9UJ83 578 aa11.17□□□□□ -0.62
ACTN1-213ENST00000554508 LRRC37AA6NMS7 1700 aa11.17□□□□□ -0.62
ACTN1-213ENST00000554508 CDHR2Q9BYE9 1310 aa11.16□□□□□ -0.62
ACTN1-213ENST00000554508 RPS8P62241 208 aaKnown RBP11.16□□□□□ -0.62
ACTN1-213ENST00000554508 FLIIQ13045 1269 aa11.16□□□□□ -0.62
ACTN1-213ENST00000554508 CCDC152Q4G0S7 254 aa11.16□□□□□ -0.62
ACTN1-213ENST00000554508 NIM1KQ8IY84 436 aa11.16□□□□□ -0.62
ACTN1-213ENST00000554508 CELF1Q92879 486 aaKnown RBP11.16□□□□□ -0.62
ACTN1-213ENST00000554508 TAF1DQ9H5J8 278 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-213ENST00000554508 CEP350Q5VT06 3117 aa11.15□□□□□ -0.62
ACTN1-213ENST00000554508 COL4A5P29400 1685 aa11.15□□□□□ -0.62
ACTN1-213ENST00000554508 IGKV5-2P06315 115 aa11.15□□□□□ -0.62
ACTN1-213ENST00000554508 KIAA2012Q0VF49 1180 aa11.15□□□□□ -0.62
ACTN1-213ENST00000554508 FKBP5Q13451 457 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-213ENST00000554508 AOC3Q16853 763 aa11.15□□□□□ -0.62
ACTN1-213ENST00000554508 CHADLQ6NUI6 762 aa11.15□□□□□ -0.62
ACTN1-213ENST00000554508 PNMA8AQ86V59 439 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-213ENST00000554508 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-213ENST00000554508 ZNRF3Q9ULT6 936 aa11.15□□□□□ -0.62
ACTN1-213ENST00000554508 ZNF521Q96K83 1311 aa11.14□□□□□ -0.63
ACTN1-213ENST00000554508 NEURL1BA8MQ27 555 aa11.14□□□□□ -0.63
ACTN1-213ENST00000554508 CCER2I3L3R5 266 aa11.14□□□□□ -0.63
ACTN1-213ENST00000554508 EPHX2P34913 555 aa11.14□□□□□ -0.63
ACTN1-213ENST00000554508 SLC51AQ86UW1 340 aa11.14□□□□□ -0.63
ACTN1-213ENST00000554508 LDHDQ86WU2 507 aa11.14□□□□□ -0.63
ACTN1-213ENST00000554508 MIER1Q8N108 512 aa11.14□□□□□ -0.63
ACTN1-213ENST00000554508 DNAJC5GQ8N7S2 189 aa11.14□□□□□ -0.63
ACTN1-213ENST00000554508 DNAAF4Q8WXU2 420 aa11.14□□□□□ -0.63
ACTN1-213ENST00000554508 NSFL1CQ9UNZ2 370 aaKnown RBP11.14□□□□□ -0.63
ACTN1-213ENST00000554508 GJA3Q9Y6H8 435 aa11.14□□□□□ -0.63
ACTN1-213ENST00000554508 H7C1W4 665 aa11.13□□□□□ -0.63
ACTN1-213ENST00000554508 LMOD1P29536 600 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-213ENST00000554508 WASHC4Q2M389 1173 aa11.13□□□□□ -0.63
ACTN1-213ENST00000554508 CWF19L2Q2TBE0 894 aaKnown RBP11.13□□□□□ -0.63
ACTN1-213ENST00000554508 LINS1Q8NG48 757 aa11.13□□□□□ -0.63
ACTN1-213ENST00000554508 JARID2Q92833 1246 aaPredicted RBP11.13□□□□□ -0.63
ACTN1-213ENST00000554508 SEC31BQ9NQW1 1179 aa11.13□□□□□ -0.63
ACTN1-213ENST00000554508 PODXL2Q9NZ53 605 aa11.13□□□□□ -0.63
ACTN1-213ENST00000554508 DUOX1Q9NRD9 1551 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 E9PSI1 815 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 POTEIP0CG38 1075 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 POTEJP0CG39 1038 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 GCKRQ14397 625 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 TNIP1Q15025 636 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 EAPPQ56P03 285 aaPredicted RBP11.12□□□□□ -0.63
ACTN1-213ENST00000554508 ANKRD18AQ8IVF6 992 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 TTLL11Q8NHH1 800 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 EYA3Q99504 573 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 PLA2G12BQ9BX93 195 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 CLEC11AQ9Y240 323 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 LTBP1Q14766 1721 aa11.12□□□□□ -0.63
ACTN1-213ENST00000554508 ADAMTSL1Q8N6G6 1762 aa11.11□□□□□ -0.63
ACTN1-213ENST00000554508 SCNN1DP51172 638 aa11.11□□□□□ -0.63
ACTN1-213ENST00000554508 CTSWP56202 376 aa11.11□□□□□ -0.63
ACTN1-213ENST00000554508 GPSM2P81274 684 aa11.11□□□□□ -0.63
ACTN1-213ENST00000554508 CXCL9Q07325 125 aa11.11□□□□□ -0.63
ACTN1-213ENST00000554508 CIAPIN1Q6FI81 312 aa11.11□□□□□ -0.63
ACTN1-213ENST00000554508 USP50Q70EL3 339 aaPredicted RBP11.11□□□□□ -0.63
ACTN1-213ENST00000554508 UBE3BQ7Z3V4 1068 aa11.11□□□□□ -0.63
ACTN1-213ENST00000554508 KLRG1Q96E93 195 aa11.11□□□□□ -0.63
ACTN1-213ENST00000554508 CDC5LQ99459 802 aaKnown RBP11.11□□□□□ -0.63
ACTN1-213ENST00000554508 RTL9Q8NET4 1388 aa11.11□□□□□ -0.63
ACTN1-213ENST00000554508 COL4A1P02462 1669 aa11.11□□□□□ -0.63
ACTN1-213ENST00000554508 SPEF2Q9C093 1822 aa11.1□□□□□ -0.63
ACTN1-213ENST00000554508 TBC1D16Q8TBP0 767 aa11.1□□□□□ -0.63
ACTN1-213ENST00000554508 CCDC85AQ96PX6 553 aaPredicted RBP11.1□□□□□ -0.63
ACTN1-213ENST00000554508 ZC3H12CQ9C0D7 883 aaKnown RBP11.1□□□□□ -0.63
ACTN1-213ENST00000554508 ANKIB1Q9P2G1 1089 aa11.1□□□□□ -0.63
ACTN1-213ENST00000554508 POLLQ9UGP5 575 aa11.1□□□□□ -0.63
ACTN1-213ENST00000554508 XDHP47989 1333 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 RIMBP2O15034 1052 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 ITGBL1O95965 494 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-213ENST00000554508 CSF1RP07333 972 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 EPS15P42566 896 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 CASP7P55210 303 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 HTRA3P83110 453 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 SLFN5Q08AF3 891 aa11.09□□□□□ -0.63
ACTN1-213ENST00000554508 BEND3Q5T5X7 828 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms