RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 NEURL1BA8MQ27 555 aa9.12□□□□□ -0.95
SCFD1-211ENST00000554437 RARAP10276 462 aa9.12□□□□□ -0.95
SCFD1-211ENST00000554437 ADH6P28332 368 aa9.12□□□□□ -0.95
SCFD1-211ENST00000554437 TMEM151AQ8N4L1 468 aa9.12□□□□□ -0.95
SCFD1-211ENST00000554437 GOLGA6L1Q8N7Z2 621 aa9.12□□□□□ -0.95
SCFD1-211ENST00000554437 ACDQ96AP0 544 aa9.12□□□□□ -0.95
SCFD1-211ENST00000554437 GGA1Q9UJY5 639 aa9.12□□□□□ -0.95
SCFD1-211ENST00000554437 GDF2Q9UK05 429 aaPredicted RBP9.12□□□□□ -0.95
SCFD1-211ENST00000554437 A6NHS1 94 aa9.11□□□□□ -0.95
SCFD1-211ENST00000554437 SIN3BO75182 1162 aa9.11□□□□□ -0.95
SCFD1-211ENST00000554437 ZNF438Q7Z4V0 828 aa9.11□□□□□ -0.95
SCFD1-211ENST00000554437 NLRP13Q86W25 1043 aa9.11□□□□□ -0.95
SCFD1-211ENST00000554437 TMC1Q8TDI8 760 aa9.11□□□□□ -0.95
SCFD1-211ENST00000554437 IGFLR1Q9H665 355 aa9.11□□□□□ -0.95
SCFD1-211ENST00000554437 ZFATQ9P243 1243 aa9.11□□□□□ -0.95
SCFD1-211ENST00000554437 KLF15Q9UIH9 416 aa9.11□□□□□ -0.95
SCFD1-211ENST00000554437 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
SCFD1-211ENST00000554437 MAPK1P28482 360 aa9.1□□□□□ -0.95
SCFD1-211ENST00000554437 EHHADHQ08426 723 aa9.1□□□□□ -0.95
SCFD1-211ENST00000554437 TBC1D8BQ0IIM8 1120 aa9.1□□□□□ -0.95
SCFD1-211ENST00000554437 TRIM26Q12899 539 aaPredicted RBP9.1□□□□□ -0.95
SCFD1-211ENST00000554437 GDF11O95390 407 aa9.09□□□□□ -0.95
SCFD1-211ENST00000554437 PDE12Q6L8Q7 609 aaKnown RBP9.09□□□□□ -0.95
SCFD1-211ENST00000554437 LYPD4Q6UWN0 246 aa9.09□□□□□ -0.95
SCFD1-211ENST00000554437 SLCO4C1Q6ZQN7 724 aa9.09□□□□□ -0.95
SCFD1-211ENST00000554437 GJD3Q8N144 294 aa9.09□□□□□ -0.95
SCFD1-211ENST00000554437 WHAMMQ8TF30 809 aa9.09□□□□□ -0.95
SCFD1-211ENST00000554437 CITED4Q96RK1 184 aa9.09□□□□□ -0.95
SCFD1-211ENST00000554437 UBE2OQ9C0C9 1292 aaKnown RBP9.09□□□□□ -0.95
SCFD1-211ENST00000554437 ELP3Q9H9T3 547 aa9.09□□□□□ -0.95
SCFD1-211ENST00000554437 MAP3K6O95382 1288 aa9.08□□□□□ -0.96
SCFD1-211ENST00000554437 CELA2BP08218 269 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-211ENST00000554437 BCRP11274 1271 aa9.08□□□□□ -0.96
SCFD1-211ENST00000554437 MARSP56192 900 aaKnown RBP9.08□□□□□ -0.96
SCFD1-211ENST00000554437 RASSF7Q02833 373 aa9.08□□□□□ -0.96
SCFD1-211ENST00000554437 PDE3BQ13370 1112 aa9.08□□□□□ -0.96
SCFD1-211ENST00000554437 TTC39BQ5VTQ0 682 aaPredicted RBP9.08□□□□□ -0.96
SCFD1-211ENST00000554437 FCHSD1Q86WN1 690 aa9.08□□□□□ -0.96
SCFD1-211ENST00000554437 MMP20O60882 483 aa9.07□□□□□ -0.96
SCFD1-211ENST00000554437 XKR5Q6UX68 686 aa9.07□□□□□ -0.96
SCFD1-211ENST00000554437 DHX32Q7L7V1 743 aaKnown RBP9.07□□□□□ -0.96
SCFD1-211ENST00000554437 SVOPQ8N4V2 548 aa9.07□□□□□ -0.96
SCFD1-211ENST00000554437 GALNT6Q8NCL4 622 aa9.07□□□□□ -0.96
SCFD1-211ENST00000554437 EDARADDQ8WWZ3 215 aa9.07□□□□□ -0.96
SCFD1-211ENST00000554437 RBCK1Q9BYM8 510 aa9.07□□□□□ -0.96
SCFD1-211ENST00000554437 ABI2Q9NYB9 513 aaPredicted RBP9.07□□□□□ -0.96
SCFD1-211ENST00000554437 TMEM63CQ9P1W3 806 aa9.07□□□□□ -0.96
SCFD1-211ENST00000554437 OIP5O43482 229 aa9.06□□□□□ -0.96
SCFD1-211ENST00000554437 PSAPP07602 524 aa9.06□□□□□ -0.96
SCFD1-211ENST00000554437 MAP3K10Q02779 954 aa9.06□□□□□ -0.96
SCFD1-211ENST00000554437 ZNF385CQ66K41 422 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-211ENST00000554437 C1orf229Q6ZS94 237 aaPredicted RBP9.06□□□□□ -0.96
SCFD1-211ENST00000554437 TNFRSF25Q93038 417 aa9.06□□□□□ -0.96
SCFD1-211ENST00000554437 DNAJB12Q9NXW2 375 aaKnown RBP9.06□□□□□ -0.96
SCFD1-211ENST00000554437 TLR7Q9NYK1 1049 aaKnown RBP9.06□□□□□ -0.96
SCFD1-211ENST00000554437 ELOA3CA0A087WX78 387 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-211ENST00000554437 ELOA3DA6NLF2 546 aaPredicted RBP9.05□□□□□ -0.96
SCFD1-211ENST00000554437 EPXP11678 715 aa9.05□□□□□ -0.96
SCFD1-211ENST00000554437 ALAS2P22557 587 aa9.05□□□□□ -0.96
SCFD1-211ENST00000554437 ELOA3BQ3SY89 546 aa9.05□□□□□ -0.96
SCFD1-211ENST00000554437 ELOA3Q8NG57 546 aa9.05□□□□□ -0.96
SCFD1-211ENST00000554437 FAM129BQ96TA1 746 aa9.05□□□□□ -0.96
SCFD1-211ENST00000554437 ADARB2-AS1A8MUL3 147 aa9.04□□□□□ -0.96
SCFD1-211ENST00000554437 ADH7P40394 386 aa9.04□□□□□ -0.96
SCFD1-211ENST00000554437 PLAURQ03405 335 aa9.04□□□□□ -0.96
SCFD1-211ENST00000554437 TMC7Q7Z402 723 aa9.04□□□□□ -0.96
SCFD1-211ENST00000554437 ZSCAN29Q8IWY8 852 aaPredicted RBP9.04□□□□□ -0.96
SCFD1-211ENST00000554437 TNFRSF21O75509 655 aa9.03□□□□□ -0.96
SCFD1-211ENST00000554437 MLLT1Q03111 559 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-211ENST00000554437 PCSK7Q16549 785 aa9.03□□□□□ -0.96
SCFD1-211ENST00000554437 CCDC27Q2M243 656 aa9.03□□□□□ -0.96
SCFD1-211ENST00000554437 XP32Q5T750 250 aa9.03□□□□□ -0.96
SCFD1-211ENST00000554437 OR13H1Q8NG92 308 aa9.03□□□□□ -0.96
SCFD1-211ENST00000554437 DMRTB1Q96MA1 342 aa9.03□□□□□ -0.96
SCFD1-211ENST00000554437 ENAMQ9NRM1 1142 aa9.03□□□□□ -0.96
SCFD1-211ENST00000554437 LRRC4BQ9NT99 713 aa9.03□□□□□ -0.96
SCFD1-211ENST00000554437 CNTN3Q9P232 1028 aa9.03□□□□□ -0.96
SCFD1-211ENST00000554437 FOXD3Q9UJU5 478 aaPredicted RBP9.03□□□□□ -0.96
SCFD1-211ENST00000554437 PHF20L1A8MW92 1017 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 SHISA8B8ZZ34 492 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 GPR182O15218 404 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 PHACTR2O75167 634 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 AMPD1P23109 780 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 SOX18P35713 384 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 NRLP54845 237 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 TMCO4Q5TGY1 634 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 C1orf127Q8N9H9 656 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 TRPM4Q8TD43 1214 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 SNX29Q8TEQ0 813 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 NSUN5Q96P11 429 aaKnown RBP9.02□□□□□ -0.97
SCFD1-211ENST00000554437 NIF3L1Q9GZT8 377 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 SLC6A14Q9UN76 642 aa9.02□□□□□ -0.97
SCFD1-211ENST00000554437 ZBTB42B2RXF5 422 aa9.01□□□□□ -0.97
SCFD1-211ENST00000554437 CYP2E1P05181 493 aaPredicted RBP9.01□□□□□ -0.97
SCFD1-211ENST00000554437 NEFLP07196 543 aa9.01□□□□□ -0.97
SCFD1-211ENST00000554437 CES1P23141 567 aa9.01□□□□□ -0.97
SCFD1-211ENST00000554437 GPLD1P80108 840 aa9.01□□□□□ -0.97
SCFD1-211ENST00000554437 HFE2Q6ZVN8 426 aa9.01□□□□□ -0.97
SCFD1-211ENST00000554437 NEDD1Q8NHV4 660 aa9.01□□□□□ -0.97
SCFD1-211ENST00000554437 BTBD6Q96KE9 485 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms