RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 C9orf78Q9NZ63 289 aaPredicted RBP17.44■□□□□ 0.38
NUMB-209ENST00000554315 ABCC4O15439 1325 aa17.44■□□□□ 0.38
NUMB-209ENST00000554315 IPO8O15397 1037 aaKnown RBP17.44■□□□□ 0.38
NUMB-209ENST00000554315 FKBP4Q02790 459 aaKnown RBP eCLIP17.44■□□□□ 0.38
NUMB-209ENST00000554315 ZNF784Q8NCA9 323 aaPredicted RBP17.44■□□□□ 0.38
NUMB-209ENST00000554315 RPS8P62241 208 aaKnown RBP17.43■□□□□ 0.38
NUMB-209ENST00000554315 PSMD1Q99460 953 aa17.43■□□□□ 0.38
NUMB-209ENST00000554315 PLA2G12BQ9BX93 195 aa17.43■□□□□ 0.38
NUMB-209ENST00000554315 API5Q9BZZ5 524 aaKnown RBP17.43■□□□□ 0.38
NUMB-209ENST00000554315 ZC3H4Q9UPT8 1303 aaKnown RBP17.43■□□□□ 0.38
NUMB-209ENST00000554315 RASSF7Q02833 373 aa17.42■□□□□ 0.38
NUMB-209ENST00000554315 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
NUMB-209ENST00000554315 NOB1Q9ULX3 412 aaKnown RBP17.42■□□□□ 0.38
NUMB-209ENST00000554315 SLX4Q8IY92 1834 aa17.42■□□□□ 0.38
NUMB-209ENST00000554315 GRM8O00222 908 aa17.41■□□□□ 0.38
NUMB-209ENST00000554315 CTSWP56202 376 aa17.41■□□□□ 0.38
NUMB-209ENST00000554315 SUPT20HQ8NEM7 779 aa17.41■□□□□ 0.38
NUMB-209ENST00000554315 VPS33BQ9H267 617 aa17.41■□□□□ 0.38
NUMB-209ENST00000554315 KIF16BQ96L93 1317 aa17.41■□□□□ 0.38
NUMB-209ENST00000554315 DPY19L2Q6NUT2 758 aa17.41■□□□□ 0.38
NUMB-209ENST00000554315 TTLL11Q8NHH1 800 aa17.41■□□□□ 0.38
NUMB-209ENST00000554315 CDC5LQ99459 802 aaKnown RBP17.41■□□□□ 0.38
NUMB-209ENST00000554315 COL11A2P13942 1736 aaPredicted RBP17.41■□□□□ 0.38
NUMB-209ENST00000554315 CCT4P50991 539 aaKnown RBP17.4■□□□□ 0.38
NUMB-209ENST00000554315 MPNDQ8N594 471 aa17.4■□□□□ 0.38
NUMB-209ENST00000554315 CASP7P55210 303 aa17.39■□□□□ 0.37
NUMB-209ENST00000554315 OLFM4Q6UX06 510 aa17.39■□□□□ 0.37
NUMB-209ENST00000554315 DPP8Q6V1X1 898 aaPredicted RBP17.39■□□□□ 0.37
NUMB-209ENST00000554315 ANKRD18AQ8IVF6 992 aa17.39■□□□□ 0.37
NUMB-209ENST00000554315 GPBP1L1Q9HC44 474 aaPredicted RBP17.39■□□□□ 0.37
NUMB-209ENST00000554315 TNRC6CQ9HCJ0 1690 aaKnown RBP17.39■□□□□ 0.37
NUMB-209ENST00000554315 CSF1RP07333 972 aa17.38■□□□□ 0.37
NUMB-209ENST00000554315 CELF1Q92879 486 aaKnown RBP17.38■□□□□ 0.37
NUMB-209ENST00000554315 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
NUMB-209ENST00000554315 KDM2BQ8NHM5 1336 aa17.38■□□□□ 0.37
NUMB-209ENST00000554315 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
NUMB-209ENST00000554315 SEC31BQ9NQW1 1179 aa17.38■□□□□ 0.37
NUMB-209ENST00000554315 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
NUMB-209ENST00000554315 CCDC85AQ96PX6 553 aaPredicted RBP17.37■□□□□ 0.37
NUMB-209ENST00000554315 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
NUMB-209ENST00000554315 PRELPP51888 382 aa17.36■□□□□ 0.37
NUMB-209ENST00000554315 RTFDC1Q9BY42 306 aaPredicted RBP17.36■□□□□ 0.37
NUMB-209ENST00000554315 NSFL1CQ9UNZ2 370 aaKnown RBP17.36■□□□□ 0.37
NUMB-209ENST00000554315 RTL9Q8NET4 1388 aa17.36■□□□□ 0.37
NUMB-209ENST00000554315 IGHMBP2P38935 993 aaKnown RBP17.35■□□□□ 0.37
NUMB-209ENST00000554315 GREM2Q9H772 168 aa17.35■□□□□ 0.37
NUMB-209ENST00000554315 UTYO14607 1347 aa17.35■□□□□ 0.37
NUMB-209ENST00000554315 ANKRD18BA2A2Z9 1011 aa17.35■□□□□ 0.37
NUMB-209ENST00000554315 GLTPD2A6NH11 291 aa17.35■□□□□ 0.37
NUMB-209ENST00000554315 BCAR3O75815 825 aa17.35■□□□□ 0.37
NUMB-209ENST00000554315 IFIT5Q13325 482 aaKnown RBP17.35■□□□□ 0.37
NUMB-209ENST00000554315 ZNF526Q8TF50 670 aaPredicted RBP17.35■□□□□ 0.37
NUMB-209ENST00000554315 FRAT1Q92837 279 aaPredicted RBP17.35■□□□□ 0.37
NUMB-209ENST00000554315 BSDC1Q9NW68 430 aaPredicted RBP17.35■□□□□ 0.37
NUMB-209ENST00000554315 ITGA6P23229 1130 aa17.34■□□□□ 0.37
NUMB-209ENST00000554315 FOXO4P98177 505 aa17.34■□□□□ 0.37
NUMB-209ENST00000554315 CCDC57Q2TAC2 916 aa17.34■□□□□ 0.37
NUMB-209ENST00000554315 LARGE2Q8N3Y3 721 aa17.34■□□□□ 0.37
NUMB-209ENST00000554315 MPHOSPH8Q99549 860 aa17.34■□□□□ 0.37
NUMB-209ENST00000554315 ANKIB1Q9P2G1 1089 aa17.34■□□□□ 0.37
NUMB-209ENST00000554315 ZKSCAN2Q63HK3 967 aa17.33■□□□□ 0.37
NUMB-209ENST00000554315 LMBR1LQ6UX01 489 aa17.33■□□□□ 0.37
NUMB-209ENST00000554315 ATF7IPQ6VMQ6 1270 aa17.33■□□□□ 0.37
NUMB-209ENST00000554315 EYA3Q99504 573 aa17.33■□□□□ 0.37
NUMB-209ENST00000554315 USP44Q9H0E7 712 aa17.33■□□□□ 0.37
NUMB-209ENST00000554315 CHMP3Q9Y3E7 222 aa17.33■□□□□ 0.37
NUMB-209ENST00000554315 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.36
NUMB-209ENST00000554315 NBPF7P0C2Y1 421 aaPredicted RBP17.33■□□□□ 0.36
NUMB-209ENST00000554315 PODXL2Q9NZ53 605 aa17.33■□□□□ 0.36
NUMB-209ENST00000554315 FER1L6Q2WGJ9 1857 aa17.32■□□□□ 0.36
NUMB-209ENST00000554315 C6orf229H3BNL8 230 aa17.32■□□□□ 0.36
NUMB-209ENST00000554315 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
NUMB-209ENST00000554315 INTS3Q68E01 1043 aaKnown RBP17.32■□□□□ 0.36
NUMB-209ENST00000554315 EIF6P56537 245 aaKnown RBP17.31■□□□□ 0.36
NUMB-209ENST00000554315 WASHC4Q2M389 1173 aa17.31■□□□□ 0.36
NUMB-209ENST00000554315 TAF7LQ5H9L4 462 aa17.31■□□□□ 0.36
NUMB-209ENST00000554315 NIM1KQ8IY84 436 aa17.31■□□□□ 0.36
NUMB-209ENST00000554315 SBF1O95248 1867 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 CACNA1SQ13698 1873 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 FZD9O00144 591 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 GPSM2P81274 684 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 FAM161AQ3B820 660 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 ZC3H12CQ9C0D7 883 aaKnown RBP17.3■□□□□ 0.36
NUMB-209ENST00000554315 ANKRD2Q9GZV1 360 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 GGA1Q9UJY5 639 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 SNED1Q8TER0 1413 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 LAMB2P55268 1798 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 UBTFL1P0CB47 393 aaPredicted RBP17.3■□□□□ 0.36
NUMB-209ENST00000554315 MS4A1P11836 297 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 ATP2B4P23634 1241 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 KIAA2012Q0VF49 1180 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 SUCLG2Q96I99 432 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 MINPP1Q9UNW1 487 aa17.3■□□□□ 0.36
NUMB-209ENST00000554315 XDHP47989 1333 aa17.29■□□□□ 0.36
NUMB-209ENST00000554315 GNAI3P08754 354 aa17.29■□□□□ 0.36
NUMB-209ENST00000554315 TRIM27P14373 513 aa17.29■□□□□ 0.36
NUMB-209ENST00000554315 VEGFAP15692 232 aaPredicted RBP17.29■□□□□ 0.36
NUMB-209ENST00000554315 AOC3Q16853 763 aa17.29■□□□□ 0.36
NUMB-209ENST00000554315 EPHA10Q5JZY3 1008 aa17.29■□□□□ 0.36
NUMB-209ENST00000554315 TBC1D16Q8TBP0 767 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms