RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 GPLD1P80108 840 aa5.83□□□□□ -1.48
SRP54-204ENST00000553923 RASA1P20936 1047 aa5.82□□□□□ -1.48
SRP54-204ENST00000553923 MCTP1Q6DN14 999 aa5.82□□□□□ -1.48
SRP54-204ENST00000553923 WFDC8Q8IUA0 241 aa5.82□□□□□ -1.48
SRP54-204ENST00000553923 KLK14Q9P0G3 267 aa5.82□□□□□ -1.48
SRP54-204ENST00000553923 KRTAP4-8A0A0G2JLE6 195 aa5.81□□□□□ -1.48
SRP54-204ENST00000553923 OPLAHO14841 1288 aa5.81□□□□□ -1.48
SRP54-204ENST00000553923 RAD21O60216 631 aa5.81□□□□□ -1.48
SRP54-204ENST00000553923 EPB42P16452 691 aa5.81□□□□□ -1.48
SRP54-204ENST00000553923 MLLT1Q03111 559 aaPredicted RBP5.81□□□□□ -1.48
SRP54-204ENST00000553923 PTK7Q13308 1070 aa5.81□□□□□ -1.48
SRP54-204ENST00000553923 CRTC2Q53ET0 693 aaPredicted RBP5.81□□□□□ -1.48
SRP54-204ENST00000553923 ELMSAN1Q6PJG2 1045 aa5.81□□□□□ -1.48
SRP54-204ENST00000553923 KRT25Q7Z3Z0 450 aa5.81□□□□□ -1.48
SRP54-204ENST00000553923 SLC51AQ86UW1 340 aa5.81□□□□□ -1.48
SRP54-204ENST00000553923 TMEM130Q8N3G9 435 aa5.81□□□□□ -1.48
SRP54-204ENST00000553923 QTRT2Q9H974 415 aaKnown RBP5.81□□□□□ -1.48
SRP54-204ENST00000553923 TFIP11Q9UBB9 837 aaKnown RBP5.81□□□□□ -1.48
SRP54-204ENST00000553923 MAFBQ9Y5Q3 323 aaPredicted RBP5.81□□□□□ -1.48
SRP54-204ENST00000553923 COL17A1Q9UMD9 1497 aaPredicted RBP5.81□□□□□ -1.48
SRP54-204ENST00000553923 LGR5O75473 907 aa5.8□□□□□ -1.48
SRP54-204ENST00000553923 SASH3O75995 380 aa5.8□□□□□ -1.48
SRP54-204ENST00000553923 EGFRP00533 1210 aa5.8□□□□□ -1.48
SRP54-204ENST00000553923 NRLP54845 237 aa5.8□□□□□ -1.48
SRP54-204ENST00000553923 KANK4Q5T7N3 995 aaPredicted RBP5.8□□□□□ -1.48
SRP54-204ENST00000553923 SMG9Q9H0W8 520 aaKnown RBP5.8□□□□□ -1.48
SRP54-204ENST00000553923 RBM19Q9Y4C8 960 aaKnown RBP5.8□□□□□ -1.48
SRP54-204ENST00000553923 BTBD11A6QL63 1104 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 F8W735 103 aaPredicted RBP5.79□□□□□ -1.48
SRP54-204ENST00000553923 MICAL2O94851 1124 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 ALX3O95076 343 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 FSTP19883 344 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 CD97P48960 835 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 ARSDP51689 593 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 Q6ZS46 218 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 HFE2Q6ZVN8 426 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 FNBP4Q8N3X1 1017 aaPredicted RBP5.79□□□□□ -1.48
SRP54-204ENST00000553923 MYO19Q96H55 970 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 HINFPQ9BQA5 517 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 AKTIPQ9H8T0 292 aa5.79□□□□□ -1.48
SRP54-204ENST00000553923 TLR7Q9NYK1 1049 aaKnown RBP5.79□□□□□ -1.48
SRP54-204ENST00000553923 RARAP10276 462 aa5.78□□□□□ -1.48
SRP54-204ENST00000553923 UBTFP17480 764 aaKnown RBP5.78□□□□□ -1.48
SRP54-204ENST00000553923 WEE1P30291 646 aa5.78□□□□□ -1.48
SRP54-204ENST00000553923 DPYDQ12882 1025 aa5.78□□□□□ -1.48
SRP54-204ENST00000553923 DGKZQ13574 1117 aa5.78□□□□□ -1.48
SRP54-204ENST00000553923 ARXQ96QS3 562 aa5.78□□□□□ -1.48
SRP54-204ENST00000553923 MED26O95402 600 aa5.77□□□□□ -1.49
SRP54-204ENST00000553923 HOXD8P13378 290 aaPredicted RBP5.77□□□□□ -1.49
SRP54-204ENST00000553923 FLIIQ13045 1269 aa5.77□□□□□ -1.49
SRP54-204ENST00000553923 C11orf91Q3C1V1 193 aa5.77□□□□□ -1.49
SRP54-204ENST00000553923 MRPL18Q9H0U6 180 aaKnown RBP5.77□□□□□ -1.49
SRP54-204ENST00000553923 LRFN2Q9ULH4 789 aa5.77□□□□□ -1.49
SRP54-204ENST00000553923 LOC102724428A0A0B4J2F2 783 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 J3QW42 95 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 SIK1P57059 783 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 SETDB1Q15047 1291 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 LARP1Q6PKG0 1096 aaKnown RBP5.76□□□□□ -1.49
SRP54-204ENST00000553923 ANKMY2Q8IV38 441 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 GLMNQ92990 594 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 PLD4Q96BZ4 506 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 FMNL2Q96PY5 1086 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 PCMTD2Q9NV79 361 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 USP20Q9Y2K6 914 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 RTCBQ9Y3I0 505 aaKnown RBP5.76□□□□□ -1.49
SRP54-204ENST00000553923 KCNMB2Q9Y691 235 aa5.76□□□□□ -1.49
SRP54-204ENST00000553923 FAM196BA6NMK8 535 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L15C9J2P7 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L10C9JJH3 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L13C9JLJ4 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L12C9JPN9 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L11C9JVI0 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L21D6R901 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L18D6R9N7 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L22D6RA61 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L17D6RBQ6 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L19D6RCP7 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L20D6RJB6 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 TM4SF5O14894 197 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 FOXO3O43524 673 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 SSTR4P31391 388 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 USP17L24Q0WX57 530 aa5.75□□□□□ -1.49
SRP54-204ENST00000553923 KIAA1324LA8MWY0 1029 aaPredicted RBP5.74□□□□□ -1.49
SRP54-204ENST00000553923 MMP20O60882 483 aa5.74□□□□□ -1.49
SRP54-204ENST00000553923 EIF2AK2P19525 551 aaKnown RBP5.74□□□□□ -1.49
SRP54-204ENST00000553923 SOX18P35713 384 aa5.74□□□□□ -1.49
SRP54-204ENST00000553923 IL22RA1Q8N6P7 574 aa5.74□□□□□ -1.49
SRP54-204ENST00000553923 UBL7Q96S82 380 aaPredicted RBP5.74□□□□□ -1.49
SRP54-204ENST00000553923 PPP1R12CQ9BZL4 782 aa5.74□□□□□ -1.49
SRP54-204ENST00000553923 SRA1Q9HD15 236 aaKnown RBP5.74□□□□□ -1.49
SRP54-204ENST00000553923 XYLBO75191 536 aa5.73□□□□□ -1.49
SRP54-204ENST00000553923 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.73□□□□□ -1.49
SRP54-204ENST00000553923 AGGF1Q8N302 714 aaeCLIP5.73□□□□□ -1.49
SRP54-204ENST00000553923 RAXQ9Y2V3 346 aa5.73□□□□□ -1.49
SRP54-204ENST00000553923 ADAMTS4O75173 837 aa5.72□□□□□ -1.49
SRP54-204ENST00000553923 IGLV1-40P01703 118 aa5.72□□□□□ -1.49
SRP54-204ENST00000553923 ARID4AP29374 1257 aaPredicted RBP5.72□□□□□ -1.49
SRP54-204ENST00000553923 GDF6Q6KF10 455 aaPredicted RBP5.72□□□□□ -1.49
SRP54-204ENST00000553923 TREML1Q86YW5 311 aa5.72□□□□□ -1.49
SRP54-204ENST00000553923 MAP4K3Q8IVH8 894 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms