RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 TNIP1Q15025 636 aa12.87□□□□□ -0.35
ACTN1-210ENST00000553779 PDIA6Q15084 440 aa12.87□□□□□ -0.35
ACTN1-210ENST00000553779 CIAPIN1Q6FI81 312 aa12.87□□□□□ -0.35
ACTN1-210ENST00000553779 SLC51AQ86UW1 340 aa12.87□□□□□ -0.35
ACTN1-210ENST00000553779 GRAPLQ8TC17 118 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-210ENST00000553779 VPS33BQ9H267 617 aa12.87□□□□□ -0.35
ACTN1-210ENST00000553779 ADARB2Q9NS39 739 aaKnown RBP12.87□□□□□ -0.35
ACTN1-210ENST00000553779 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
ACTN1-210ENST00000553779 RASSF10A6NK89 507 aa12.86□□□□□ -0.35
ACTN1-210ENST00000553779 GMPSP49915 693 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-210ENST00000553779 KRT24Q2M2I5 525 aa12.86□□□□□ -0.35
ACTN1-210ENST00000553779 SLC10A5Q5PT55 438 aa12.86□□□□□ -0.35
ACTN1-210ENST00000553779 TMC4Q7Z404 712 aa12.86□□□□□ -0.35
ACTN1-210ENST00000553779 SP8Q8IXZ3 490 aa12.86□□□□□ -0.35
ACTN1-210ENST00000553779 ZNF408Q9H9D4 720 aa12.86□□□□□ -0.35
ACTN1-210ENST00000553779 GPRC5DQ9NZD1 345 aa12.86□□□□□ -0.35
ACTN1-210ENST00000553779 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-210ENST00000553779 CASP8AP2Q9UKL3 1982 aa12.86□□□□□ -0.35
ACTN1-210ENST00000553779 AKAP11Q9UKA4 1901 aa12.86□□□□□ -0.35
ACTN1-210ENST00000553779 THSD7BQ9C0I4 1608 aa12.85□□□□□ -0.35
ACTN1-210ENST00000553779 RAD17O75943 681 aa12.85□□□□□ -0.35
ACTN1-210ENST00000553779 LBX1P52954 281 aa12.85□□□□□ -0.35
ACTN1-210ENST00000553779 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
ACTN1-210ENST00000553779 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
ACTN1-210ENST00000553779 PRDM10Q9NQV6 1147 aa12.85□□□□□ -0.35
ACTN1-210ENST00000553779 G3V3G9 751 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 TRAF5O00463 557 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 HOXB7P09629 217 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 CXCL9Q07325 125 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 KIAA2012Q0VF49 1180 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 RTL5Q5HYW3 569 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-210ENST00000553779 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 PLBD2Q8NHP8 589 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
ACTN1-210ENST00000553779 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
ACTN1-210ENST00000553779 H7C1D1 291 aa12.83□□□□□ -0.36
ACTN1-210ENST00000553779 CHL1O00533 1208 aa12.83□□□□□ -0.36
ACTN1-210ENST00000553779 CELF2O95319 508 aaKnown RBP12.83□□□□□ -0.36
ACTN1-210ENST00000553779 HSP90B1P14625 803 aaKnown RBP12.83□□□□□ -0.36
ACTN1-210ENST00000553779 CALD1Q05682 793 aaKnown RBP12.83□□□□□ -0.36
ACTN1-210ENST00000553779 CYP4F22Q6NT55 531 aa12.83□□□□□ -0.36
ACTN1-210ENST00000553779 RIC3Q7Z5B4 369 aa12.83□□□□□ -0.36
ACTN1-210ENST00000553779 FAM89AQ96GI7 184 aa12.83□□□□□ -0.36
ACTN1-210ENST00000553779 RTFDC1Q9BY42 306 aaPredicted RBP12.83□□□□□ -0.36
ACTN1-210ENST00000553779 WBP1LQ9NX94 342 aa12.83□□□□□ -0.36
ACTN1-210ENST00000553779 NSFL1CQ9UNZ2 370 aaKnown RBP12.83□□□□□ -0.36
ACTN1-210ENST00000553779 DUOX1Q9NRD9 1551 aa12.82□□□□□ -0.36
ACTN1-210ENST00000553779 CACNA1FO60840 1977 aa12.82□□□□□ -0.36
ACTN1-210ENST00000553779 RIMBP2O15034 1052 aa12.82□□□□□ -0.36
ACTN1-210ENST00000553779 FMR1Q06787 632 aaKnown RBP eCLIP12.82□□□□□ -0.36
ACTN1-210ENST00000553779 WASHC4Q2M389 1173 aa12.82□□□□□ -0.36
ACTN1-210ENST00000553779 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
ACTN1-210ENST00000553779 EYA3Q99504 573 aa12.82□□□□□ -0.36
ACTN1-210ENST00000553779 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
ACTN1-210ENST00000553779 PSME4Q14997 1843 aa12.82□□□□□ -0.36
ACTN1-210ENST00000553779 SCN9AQ15858 1988 aa12.81□□□□□ -0.36
ACTN1-210ENST00000553779 IRS4O14654 1257 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-210ENST00000553779 CFAP44Q96MT7 982 aa12.81□□□□□ -0.36
ACTN1-210ENST00000553779 GPR101Q96P66 508 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-210ENST00000553779 GLIS2Q9BZE0 524 aaPredicted RBP12.81□□□□□ -0.36
ACTN1-210ENST00000553779 DBNDD1Q9H9R9 158 aa12.81□□□□□ -0.36
ACTN1-210ENST00000553779 ADAMTS8Q9UP79 889 aa12.81□□□□□ -0.36
ACTN1-210ENST00000553779 HSPA8P11142 646 aaKnown RBP12.8□□□□□ -0.36
ACTN1-210ENST00000553779 GNAI1P63096 354 aa12.8□□□□□ -0.36
ACTN1-210ENST00000553779 MICALL2Q8IY33 904 aa12.8□□□□□ -0.36
ACTN1-210ENST00000553779 MBIPQ9NS73 344 aa12.8□□□□□ -0.36
ACTN1-210ENST00000553779 ANKIB1Q9P2G1 1089 aa12.8□□□□□ -0.36
ACTN1-210ENST00000553779 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
ACTN1-210ENST00000553779 TLL2Q9Y6L7 1015 aa12.8□□□□□ -0.36
ACTN1-210ENST00000553779 ELL2O00472 640 aaPredicted RBP12.79□□□□□ -0.36
ACTN1-210ENST00000553779 DDX58O95786 925 aaKnown RBP12.79□□□□□ -0.36
ACTN1-210ENST00000553779 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
ACTN1-210ENST00000553779 TRPM4Q8TD43 1214 aa12.79□□□□□ -0.36
ACTN1-210ENST00000553779 CELF1Q92879 486 aaKnown RBP12.79□□□□□ -0.36
ACTN1-210ENST00000553779 MYD88Q99836 296 aa12.79□□□□□ -0.36
ACTN1-210ENST00000553779 CHMP4AQ9BY43 222 aa12.79□□□□□ -0.36
ACTN1-210ENST00000553779 PSMD14O00487 310 aa12.78□□□□□ -0.36
ACTN1-210ENST00000553779 ECE2O60344 883 aa12.78□□□□□ -0.36
ACTN1-210ENST00000553779 AOC2O75106 756 aa12.78□□□□□ -0.36
ACTN1-210ENST00000553779 UFL1O94874 794 aa12.78□□□□□ -0.36
ACTN1-210ENST00000553779 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
ACTN1-210ENST00000553779 RBM26Q5T8P6 1007 aaKnown RBP12.78□□□□□ -0.36
ACTN1-210ENST00000553779 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
ACTN1-210ENST00000553779 ISCA1Q9BUE6 129 aa12.78□□□□□ -0.36
ACTN1-210ENST00000553779 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
ACTN1-210ENST00000553779 YDJCA8MPS7 323 aa12.77□□□□□ -0.37
ACTN1-210ENST00000553779 APAF1O14727 1248 aa12.77□□□□□ -0.37
ACTN1-210ENST00000553779 GPSM2P81274 684 aa12.77□□□□□ -0.37
ACTN1-210ENST00000553779 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
ACTN1-210ENST00000553779 CCDC152Q4G0S7 254 aa12.77□□□□□ -0.37
ACTN1-210ENST00000553779 TBC1D10BQ4KMP7 808 aaPredicted RBP12.77□□□□□ -0.37
ACTN1-210ENST00000553779 CST9Q5W186 159 aa12.77□□□□□ -0.37
ACTN1-210ENST00000553779 DCPSQ96C86 337 aaKnown RBP12.77□□□□□ -0.37
ACTN1-210ENST00000553779 ZC3H12CQ9C0D7 883 aaKnown RBP12.77□□□□□ -0.37
ACTN1-210ENST00000553779 TSKSQ9UJT2 592 aa12.77□□□□□ -0.37
ACTN1-210ENST00000553779 ZBTB12Q9Y330 459 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms