RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 SFSWAPQ12872 951 aaKnown RBP7.31□□□□□ -1.24
ATXN3-220ENST00000553491 OCLNQ16625 522 aa7.31□□□□□ -1.24
ATXN3-220ENST00000553491 SLCO4C1Q6ZQN7 724 aa7.31□□□□□ -1.24
ATXN3-220ENST00000553491 GOLGA6L1Q8N7Z2 621 aa7.31□□□□□ -1.24
ATXN3-220ENST00000553491 GALNT6Q8NCL4 622 aa7.31□□□□□ -1.24
ATXN3-220ENST00000553491 MDFIQ99750 246 aa7.31□□□□□ -1.24
ATXN3-220ENST00000553491 ENAMQ9NRM1 1142 aa7.31□□□□□ -1.24
ATXN3-220ENST00000553491 DMGDHQ9UI17 866 aaKnown RBP7.31□□□□□ -1.24
ATXN3-220ENST00000553491 CFAP43Q8NDM7 1665 aa7.31□□□□□ -1.24
ATXN3-220ENST00000553491 CDK13Q14004 1512 aaKnown RBP7.31□□□□□ -1.24
ATXN3-220ENST00000553491 HECW1Q76N89 1606 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 WDR7Q9Y4E6 1490 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 TYRO3Q06418 890 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 RTN1Q16799 776 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 SWI5Q1ZZU3 235 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 TMEM164Q5U3C3 297 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 AEBP1Q8IUX7 1158 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 KCTD17Q8N5Z5 321 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 EDARADDQ8WWZ3 215 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 NGLY1Q96IV0 654 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 QTRT2Q9H974 415 aaKnown RBP7.3□□□□□ -1.24
ATXN3-220ENST00000553491 AVENQ9NQS1 362 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-220ENST00000553491 SLAIN2Q9P270 581 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 ANKIB1Q9P2G1 1089 aa7.3□□□□□ -1.24
ATXN3-220ENST00000553491 EPRSP07814 1512 aaKnown RBP7.3□□□□□ -1.24
ATXN3-220ENST00000553491 NUP153P49790 1475 aaKnown RBP7.3□□□□□ -1.24
ATXN3-220ENST00000553491 CEP162Q5TB80 1403 aa7.29□□□□□ -1.24
ATXN3-220ENST00000553491 CD109Q6YHK3 1445 aa7.29□□□□□ -1.24
ATXN3-220ENST00000553491 EPXP11678 715 aa7.29□□□□□ -1.24
ATXN3-220ENST00000553491 FKBP5Q13451 457 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-220ENST00000553491 ZNF468Q5VIY5 522 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-220ENST00000553491 FCHSD1Q86WN1 690 aa7.29□□□□□ -1.24
ATXN3-220ENST00000553491 SLC30A3Q99726 388 aa7.29□□□□□ -1.24
ATXN3-220ENST00000553491 NEUROD4Q9HD90 331 aa7.29□□□□□ -1.24
ATXN3-220ENST00000553491 DNMT3AQ9Y6K1 912 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-220ENST00000553491 KDM6BO15054 1643 aa7.29□□□□□ -1.24
ATXN3-220ENST00000553491 MAP3K4Q9Y6R4 1608 aa7.29□□□□□ -1.24
ATXN3-220ENST00000553491 PPRC1Q5VV67 1664 aaKnown RBP7.28□□□□□ -1.24
ATXN3-220ENST00000553491 CNTNAP5Q8WYK1 1306 aa7.28□□□□□ -1.24
ATXN3-220ENST00000553491 ZBTB7CA1YPR0 619 aa7.28□□□□□ -1.24
ATXN3-220ENST00000553491 NEURL1BA8MQ27 555 aa7.28□□□□□ -1.24
ATXN3-220ENST00000553491 IER5Q5VY09 327 aa7.28□□□□□ -1.24
ATXN3-220ENST00000553491 BTLAQ7Z6A9 289 aa7.28□□□□□ -1.24
ATXN3-220ENST00000553491 PRIMPOLQ96LW4 560 aa7.28□□□□□ -1.24
ATXN3-220ENST00000553491 BRD7Q9NPI1 651 aa7.28□□□□□ -1.24
ATXN3-220ENST00000553491 PODXL2Q9NZ53 605 aa7.28□□□□□ -1.24
ATXN3-220ENST00000553491 PCF11O94913 1555 aaKnown RBP7.28□□□□□ -1.24
ATXN3-220ENST00000553491 GLI2P10070 1586 aa7.28□□□□□ -1.24
ATXN3-220ENST00000553491 MYO5CQ9NQX4 1742 aa7.27□□□□□ -1.25
ATXN3-220ENST00000553491 GRNP28799 593 aaKnown RBP7.27□□□□□ -1.25
ATXN3-220ENST00000553491 MARSP56192 900 aaKnown RBP7.27□□□□□ -1.25
ATXN3-220ENST00000553491 SNRPNP63162 240 aaKnown RBP7.27□□□□□ -1.25
ATXN3-220ENST00000553491 RASSF7Q02833 373 aa7.27□□□□□ -1.25
ATXN3-220ENST00000553491 NEDD1Q8NHV4 660 aa7.27□□□□□ -1.25
ATXN3-220ENST00000553491 SCARF2Q96GP6 870 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-220ENST00000553491 MYO19Q96H55 970 aa7.27□□□□□ -1.25
ATXN3-220ENST00000553491 BTBD6Q96KE9 485 aa7.27□□□□□ -1.25
ATXN3-220ENST00000553491 LRFN2Q9ULH4 789 aa7.27□□□□□ -1.25
ATXN3-220ENST00000553491 BRD1O95696 1058 aa7.26□□□□□ -1.25
ATXN3-220ENST00000553491 ADH6P28332 368 aa7.26□□□□□ -1.25
ATXN3-220ENST00000553491 PCBP4P57723 403 aaKnown RBP7.26□□□□□ -1.25
ATXN3-220ENST00000553491 CEP63Q96MT8 703 aa7.26□□□□□ -1.25
ATXN3-220ENST00000553491 KLK14Q9P0G3 267 aa7.26□□□□□ -1.25
ATXN3-220ENST00000553491 TEX14Q8IWB6 1497 aa7.25□□□□□ -1.25
ATXN3-220ENST00000553491 TGFBR3LH3BV60 316 aa7.25□□□□□ -1.25
ATXN3-220ENST00000553491 RNF225M0QZC1 329 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-220ENST00000553491 PRMT3O60678 531 aa7.25□□□□□ -1.25
ATXN3-220ENST00000553491 IRS1P35568 1242 aa7.25□□□□□ -1.25
ATXN3-220ENST00000553491 HIF1AQ16665 826 aa7.25□□□□□ -1.25
ATXN3-220ENST00000553491 LINC00114Q6XXX2 140 aa7.25□□□□□ -1.25
ATXN3-220ENST00000553491 SYT9Q86SS6 491 aa7.25□□□□□ -1.25
ATXN3-220ENST00000553491 CLP1Q92989 425 aaKnown RBP7.25□□□□□ -1.25
ATXN3-220ENST00000553491 KCNH4Q9UQ05 1017 aa7.25□□□□□ -1.25
ATXN3-220ENST00000553491 CASKIN1Q8WXD9 1431 aa7.25□□□□□ -1.25
ATXN3-220ENST00000553491 ABCA9Q8IUA7 1624 aa7.24□□□□□ -1.25
ATXN3-220ENST00000553491 SPEM2Q0P670 501 aa7.24□□□□□ -1.25
ATXN3-220ENST00000553491 DGKZQ13574 1117 aa7.24□□□□□ -1.25
ATXN3-220ENST00000553491 CAPN12Q6ZSI9 719 aa7.24□□□□□ -1.25
ATXN3-220ENST00000553491 CXXC1Q9P0U4 656 aaPredicted RBP7.24□□□□□ -1.25
ATXN3-220ENST00000553491 PRR12Q9ULL5 1215 aa7.24□□□□□ -1.25
ATXN3-220ENST00000553491 KIF14Q15058 1648 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 SIN3BO75182 1162 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 GDF11O95390 407 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 INPP5BP32019 993 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 C11orf91Q3C1V1 193 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 COX20Q5RI15 118 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 KANK3Q6NY19 840 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 BEND7Q8N7W2 519 aaPredicted RBP7.23□□□□□ -1.25
ATXN3-220ENST00000553491 TNFRSF25Q93038 417 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 COL26A1Q96A83 441 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 CDC42BPBQ9Y5S2 1711 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 CCDC18Q5T9S5 1454 aa7.23□□□□□ -1.25
ATXN3-220ENST00000553491 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.22□□□□□ -1.25
ATXN3-220ENST00000553491 MTUS2Q5JR59 1369 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 CDC42BPAQ5VT25 1732 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 TTC37Q6PGP7 1564 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 ELOA3CA0A087WX78 387 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-220ENST00000553491 ELOA3DA6NLF2 546 aaPredicted RBP7.22□□□□□ -1.25
ATXN3-220ENST00000553491 ADARB2-AS1A8MUL3 147 aa7.22□□□□□ -1.25
ATXN3-220ENST00000553491 RAPGEF3O95398 923 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms