RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 CRBNQ96SW2 442 aa12.24□□□□□ -0.45
TMEM260-204ENST00000553335 UTP14AQ9BVJ6 771 aaKnown RBP12.24□□□□□ -0.45
TMEM260-204ENST00000553335 TRMT112Q9UI30 125 aaKnown RBP12.24□□□□□ -0.45
TMEM260-204ENST00000553335 PARP3Q9Y6F1 533 aa12.24□□□□□ -0.45
TMEM260-204ENST00000553335 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
TMEM260-204ENST00000553335 LRP5O75197 1615 aa12.23□□□□□ -0.45
TMEM260-204ENST00000553335 FAM177BA6PVY3 158 aa12.23□□□□□ -0.45
TMEM260-204ENST00000553335 GRM8O00222 908 aa12.23□□□□□ -0.45
TMEM260-204ENST00000553335 PCCAP05165 728 aaPredicted RBP12.23□□□□□ -0.45
TMEM260-204ENST00000553335 HSP90B1P14625 803 aaKnown RBP12.23□□□□□ -0.45
TMEM260-204ENST00000553335 GTF2E1P29083 439 aaPredicted RBP12.23□□□□□ -0.45
TMEM260-204ENST00000553335 IRX6P78412 446 aaPredicted RBP12.23□□□□□ -0.45
TMEM260-204ENST00000553335 SUSD4Q5VX71 490 aa12.23□□□□□ -0.45
TMEM260-204ENST00000553335 CHRDL2Q6WN34 429 aa12.23□□□□□ -0.45
TMEM260-204ENST00000553335 TPTE2Q6XPS3 522 aa12.23□□□□□ -0.45
TMEM260-204ENST00000553335 NBPF5PQ86XG9 351 aaPredicted RBP12.23□□□□□ -0.45
TMEM260-204ENST00000553335 MTFR1LQ9H019 292 aa12.23□□□□□ -0.45
TMEM260-204ENST00000553335 DDX60Q8IY21 1712 aaKnown RBP12.23□□□□□ -0.45
TMEM260-204ENST00000553335 UTYO14607 1347 aa12.22□□□□□ -0.45
TMEM260-204ENST00000553335 H7C1W4 665 aa12.22□□□□□ -0.45
TMEM260-204ENST00000553335 ZBTB7BO15156 539 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-204ENST00000553335 SERPINB2P05120 415 aa12.22□□□□□ -0.45
TMEM260-204ENST00000553335 UBTFL1P0CB47 393 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-204ENST00000553335 PSEN1P49768 467 aa12.22□□□□□ -0.45
TMEM260-204ENST00000553335 AAMPQ13685 434 aa12.22□□□□□ -0.45
TMEM260-204ENST00000553335 MSL1Q68DK7 614 aa12.22□□□□□ -0.45
TMEM260-204ENST00000553335 ZBTB38Q8NAP3 1195 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-204ENST00000553335 PDGFDQ9GZP0 370 aaPredicted RBP12.22□□□□□ -0.45
TMEM260-204ENST00000553335 USP44Q9H0E7 712 aa12.22□□□□□ -0.45
TMEM260-204ENST00000553335 SH3TC1Q8TE82 1336 aa12.21□□□□□ -0.45
TMEM260-204ENST00000553335 CDHR2Q9BYE9 1310 aa12.21□□□□□ -0.45
TMEM260-204ENST00000553335 POLRMTO00411 1230 aaKnown RBP12.21□□□□□ -0.45
TMEM260-204ENST00000553335 NTSR2O95665 410 aa12.21□□□□□ -0.45
TMEM260-204ENST00000553335 MMP10P09238 476 aa12.21□□□□□ -0.45
TMEM260-204ENST00000553335 POLD1P28340 1107 aa12.21□□□□□ -0.45
TMEM260-204ENST00000553335 ST5P78524 1137 aa12.21□□□□□ -0.45
TMEM260-204ENST00000553335 UBE3BQ7Z3V4 1068 aa12.21□□□□□ -0.45
TMEM260-204ENST00000553335 MEIS3Q99687 375 aa12.21□□□□□ -0.45
TMEM260-204ENST00000553335 PPP1R1BQ9UD71 204 aaPredicted RBP12.21□□□□□ -0.45
TMEM260-204ENST00000553335 ZBTB7AO95365 584 aa12.2□□□□□ -0.46
TMEM260-204ENST00000553335 GNAI2P04899 355 aa12.2□□□□□ -0.46
TMEM260-204ENST00000553335 NBPF7P0C2Y1 421 aaPredicted RBP12.2□□□□□ -0.46
TMEM260-204ENST00000553335 RTL5Q5HYW3 569 aaPredicted RBP12.2□□□□□ -0.46
TMEM260-204ENST00000553335 PIP4P2Q8N4L2 257 aa12.2□□□□□ -0.46
TMEM260-204ENST00000553335 CNBD1Q8NA66 436 aa12.2□□□□□ -0.46
TMEM260-204ENST00000553335 EXOC6Q8TAG9 804 aa12.2□□□□□ -0.46
TMEM260-204ENST00000553335 FAM89AQ96GI7 184 aa12.2□□□□□ -0.46
TMEM260-204ENST00000553335 SPON1Q9HCB6 807 aa12.2□□□□□ -0.46
TMEM260-204ENST00000553335 IRS4O14654 1257 aaPredicted RBP12.19□□□□□ -0.46
TMEM260-204ENST00000553335 DDR1Q08345 913 aa12.19□□□□□ -0.46
TMEM260-204ENST00000553335 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
TMEM260-204ENST00000553335 NUTM1Q86Y26 1132 aa12.19□□□□□ -0.46
TMEM260-204ENST00000553335 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
TMEM260-204ENST00000553335 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
TMEM260-204ENST00000553335 PDE8AO60658 829 aa12.18□□□□□ -0.46
TMEM260-204ENST00000553335 CASP7P55210 303 aa12.18□□□□□ -0.46
TMEM260-204ENST00000553335 ERFEQ4G0M1 354 aa12.18□□□□□ -0.46
TMEM260-204ENST00000553335 SLC10A5Q5PT55 438 aa12.18□□□□□ -0.46
TMEM260-204ENST00000553335 ERICH6BQ5W0A0 696 aa12.18□□□□□ -0.46
TMEM260-204ENST00000553335 SUCLG2Q96I99 432 aa12.18□□□□□ -0.46
TMEM260-204ENST00000553335 PLA2G12BQ9BX93 195 aa12.18□□□□□ -0.46
TMEM260-204ENST00000553335 RIC1Q4ADV7 1423 aa12.18□□□□□ -0.46
TMEM260-204ENST00000553335 ANKRD31Q8N7Z5 1873 aa12.17□□□□□ -0.46
TMEM260-204ENST00000553335 NLRP3Q96P20 1036 aa12.17□□□□□ -0.46
TMEM260-204ENST00000553335 LRRFIP2Q9Y608 721 aaKnown RBP12.17□□□□□ -0.46
TMEM260-204ENST00000553335 KIF13BQ9NQT8 1826 aa12.16□□□□□ -0.46
TMEM260-204ENST00000553335 IFNL1Q8IU54 200 aa12.16□□□□□ -0.46
TMEM260-204ENST00000553335 RPAP2Q8IXW5 612 aaPredicted RBP12.16□□□□□ -0.46
TMEM260-204ENST00000553335 SYNE4Q8N205 404 aa12.16□□□□□ -0.46
TMEM260-204ENST00000553335 BICC1Q9H694 974 aaKnown RBP12.16□□□□□ -0.46
TMEM260-204ENST00000553335 C1orf115Q9H7X2 142 aa12.16□□□□□ -0.46
TMEM260-204ENST00000553335 TNRC6CQ9HCJ0 1690 aaKnown RBP12.16□□□□□ -0.46
TMEM260-204ENST00000553335 MAP3K13O43283 966 aa12.15□□□□□ -0.46
TMEM260-204ENST00000553335 HCLS1P14317 486 aaPredicted RBP12.15□□□□□ -0.46
TMEM260-204ENST00000553335 PDE6BP35913 854 aa12.15□□□□□ -0.46
TMEM260-204ENST00000553335 CCDC24Q8N4L8 307 aa12.15□□□□□ -0.46
TMEM260-204ENST00000553335 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
TMEM260-204ENST00000553335 ABCC12Q96J65 1359 aa12.15□□□□□ -0.46
TMEM260-204ENST00000553335 CTSWP56202 376 aa12.14□□□□□ -0.47
TMEM260-204ENST00000553335 FOXO4P98177 505 aa12.14□□□□□ -0.47
TMEM260-204ENST00000553335 RABL6Q3YEC7 729 aaPredicted RBP12.14□□□□□ -0.47
TMEM260-204ENST00000553335 CCDC152Q4G0S7 254 aa12.14□□□□□ -0.47
TMEM260-204ENST00000553335 LMBR1LQ6UX01 489 aa12.14□□□□□ -0.47
TMEM260-204ENST00000553335 KAZALD1Q96I82 304 aa12.14□□□□□ -0.47
TMEM260-204ENST00000553335 BRIP1Q9BX63 1249 aa12.14□□□□□ -0.47
TMEM260-204ENST00000553335 PDZRN3Q9UPQ7 1066 aa12.14□□□□□ -0.47
TMEM260-204ENST00000553335 CHMP3Q9Y3E7 222 aa12.14□□□□□ -0.47
TMEM260-204ENST00000553335 SPEF2Q9C093 1822 aa12.14□□□□□ -0.47
TMEM260-204ENST00000553335 CACNA1SQ13698 1873 aa12.13□□□□□ -0.47
TMEM260-204ENST00000553335 HMMRO75330 724 aa12.13□□□□□ -0.47
TMEM260-204ENST00000553335 CSF1RP07333 972 aa12.13□□□□□ -0.47
TMEM260-204ENST00000553335 ATP8B2P98198 1209 aa12.13□□□□□ -0.47
TMEM260-204ENST00000553335 MTX1Q13505 466 aa12.13□□□□□ -0.47
TMEM260-204ENST00000553335 SF3B3Q15393 1217 aaKnown RBP12.13□□□□□ -0.47
TMEM260-204ENST00000553335 EPHA10Q5JZY3 1008 aa12.13□□□□□ -0.47
TMEM260-204ENST00000553335 CEP85Q6P2H3 762 aa12.13□□□□□ -0.47
TMEM260-204ENST00000553335 ANKRD44Q8N8A2 993 aa12.13□□□□□ -0.47
TMEM260-204ENST00000553335 TTLL11Q8NHH1 800 aa12.13□□□□□ -0.47
TMEM260-204ENST00000553335 MFRPQ9BY79 579 aa12.13□□□□□ -0.47
TMEM260-204ENST00000553335 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms