RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 WDR33Q9C0J8 1336 aaKnown RBP12.24□□□□□ -0.45
CHD8-203ENST00000553283 ADARB2Q9NS39 739 aaKnown RBP12.24□□□□□ -0.45
CHD8-203ENST00000553283 CHPF2Q9P2E5 772 aa12.24□□□□□ -0.45
CHD8-203ENST00000553283 HOXB7P09629 217 aa12.23□□□□□ -0.45
CHD8-203ENST00000553283 MAP2K1Q02750 393 aaPredicted RBP12.23□□□□□ -0.45
CHD8-203ENST00000553283 TNIP1Q15025 636 aa12.23□□□□□ -0.45
CHD8-203ENST00000553283 WDR43Q15061 677 aaKnown RBP eCLIP12.23□□□□□ -0.45
CHD8-203ENST00000553283 HDGFL1Q5TGJ6 251 aa12.23□□□□□ -0.45
CHD8-203ENST00000553283 CST9Q5W186 159 aa12.23□□□□□ -0.45
CHD8-203ENST00000553283 TMC4Q7Z404 712 aa12.23□□□□□ -0.45
CHD8-203ENST00000553283 ADAMTS8Q9UP79 889 aa12.23□□□□□ -0.45
CHD8-203ENST00000553283 TRAF5O00463 557 aa12.22□□□□□ -0.45
CHD8-203ENST00000553283 GMPSP49915 693 aaPredicted RBP12.22□□□□□ -0.45
CHD8-203ENST00000553283 LBX1P52954 281 aa12.22□□□□□ -0.45
CHD8-203ENST00000553283 CIAPIN1Q6FI81 312 aa12.22□□□□□ -0.45
CHD8-203ENST00000553283 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
CHD8-203ENST00000553283 ISCA1Q9BUE6 129 aa12.22□□□□□ -0.45
CHD8-203ENST00000553283 DBF4Q9UBU7 674 aaPredicted RBP12.22□□□□□ -0.45
CHD8-203ENST00000553283 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
CHD8-203ENST00000553283 LTBP1Q14766 1721 aa12.22□□□□□ -0.45
CHD8-203ENST00000553283 RAD17O75943 681 aa12.21□□□□□ -0.45
CHD8-203ENST00000553283 ECE1P42892 770 aa12.21□□□□□ -0.45
CHD8-203ENST00000553283 SF3B3Q15393 1217 aaKnown RBP12.21□□□□□ -0.45
CHD8-203ENST00000553283 ZNF428Q96B54 188 aa12.21□□□□□ -0.45
CHD8-203ENST00000553283 FAM89AQ96GI7 184 aa12.21□□□□□ -0.45
CHD8-203ENST00000553283 BCL2L13Q9BXK5 485 aa12.21□□□□□ -0.45
CHD8-203ENST00000553283 HYPKQ9NX55 129 aa12.21□□□□□ -0.45
CHD8-203ENST00000553283 CDHR2Q9BYE9 1310 aa12.2□□□□□ -0.46
CHD8-203ENST00000553283 ATP5J2-PTCD1G3V325 749 aa12.2□□□□□ -0.46
CHD8-203ENST00000553283 HSPA8P11142 646 aaKnown RBP12.2□□□□□ -0.46
CHD8-203ENST00000553283 TRIM28Q13263 835 aaKnown RBP12.2□□□□□ -0.46
CHD8-203ENST00000553283 DUSP27Q5VZP5 1158 aa12.2□□□□□ -0.46
CHD8-203ENST00000553283 PAXIP1Q6ZW49 1069 aaPredicted RBP12.2□□□□□ -0.46
CHD8-203ENST00000553283 ZC3H15Q8WU90 426 aaKnown RBP12.2□□□□□ -0.46
CHD8-203ENST00000553283 CAPNS2Q96L46 248 aa12.2□□□□□ -0.46
CHD8-203ENST00000553283 TLL2Q9Y6L7 1015 aa12.2□□□□□ -0.46
CHD8-203ENST00000553283 YDJCA8MPS7 323 aa12.19□□□□□ -0.46
CHD8-203ENST00000553283 ZNF853P0CG23 659 aa12.19□□□□□ -0.46
CHD8-203ENST00000553283 HIRAP54198 1017 aaPredicted RBP12.19□□□□□ -0.46
CHD8-203ENST00000553283 WASHC4Q2M389 1173 aa12.19□□□□□ -0.46
CHD8-203ENST00000553283 CYP4F22Q6NT55 531 aa12.19□□□□□ -0.46
CHD8-203ENST00000553283 CELF1Q92879 486 aaKnown RBP12.19□□□□□ -0.46
CHD8-203ENST00000553283 GPR101Q96P66 508 aaPredicted RBP12.19□□□□□ -0.46
CHD8-203ENST00000553283 MBIPQ9NS73 344 aa12.19□□□□□ -0.46
CHD8-203ENST00000553283 CNOT7Q9UIV1 285 aaKnown RBP12.19□□□□□ -0.46
CHD8-203ENST00000553283 H7C1D1 291 aa12.18□□□□□ -0.46
CHD8-203ENST00000553283 IRS4O14654 1257 aaPredicted RBP12.18□□□□□ -0.46
CHD8-203ENST00000553283 CELF2O95319 508 aaKnown RBP12.18□□□□□ -0.46
CHD8-203ENST00000553283 CDC37L1Q7L3B6 337 aa12.18□□□□□ -0.46
CHD8-203ENST00000553283 SAPCD2Q86UD0 394 aa12.18□□□□□ -0.46
CHD8-203ENST00000553283 GLIS2Q9BZE0 524 aaPredicted RBP12.18□□□□□ -0.46
CHD8-203ENST00000553283 NSFL1CQ9UNZ2 370 aaKnown RBP12.18□□□□□ -0.46
CHD8-203ENST00000553283 MAP2K2P36507 400 aa12.17□□□□□ -0.46
CHD8-203ENST00000553283 RPS8P62241 208 aaKnown RBP12.17□□□□□ -0.46
CHD8-203ENST00000553283 GRM1Q13255 1194 aa12.17□□□□□ -0.46
CHD8-203ENST00000553283 RTL5Q5HYW3 569 aaPredicted RBP12.17□□□□□ -0.46
CHD8-203ENST00000553283 TRPM4Q8TD43 1214 aa12.17□□□□□ -0.46
CHD8-203ENST00000553283 DPF2Q92785 391 aa12.17□□□□□ -0.46
CHD8-203ENST00000553283 BEGAINQ9BUH8 593 aa12.17□□□□□ -0.46
CHD8-203ENST00000553283 POLLQ9UGP5 575 aa12.17□□□□□ -0.46
CHD8-203ENST00000553283 ANKRD36CQ5JPF3 1778 aa12.17□□□□□ -0.46
CHD8-203ENST00000553283 SHTN1A0MZ66 631 aa12.16□□□□□ -0.46
CHD8-203ENST00000553283 C6orf229H3BNL8 230 aa12.16□□□□□ -0.46
CHD8-203ENST00000553283 GPSM2P81274 684 aa12.16□□□□□ -0.46
CHD8-203ENST00000553283 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
CHD8-203ENST00000553283 RIC3Q7Z5B4 369 aa12.16□□□□□ -0.46
CHD8-203ENST00000553283 MICALL2Q8IY33 904 aa12.16□□□□□ -0.46
CHD8-203ENST00000553283 ZBTB38Q8NAP3 1195 aaPredicted RBP12.16□□□□□ -0.46
CHD8-203ENST00000553283 HHIPL1Q96JK4 782 aa12.16□□□□□ -0.46
CHD8-203ENST00000553283 PRKRIP1Q9H875 184 aaPredicted RBP12.16□□□□□ -0.46
CHD8-203ENST00000553283 DBNDD1Q9H9R9 158 aa12.16□□□□□ -0.46
CHD8-203ENST00000553283 IFT57Q9NWB7 429 aa12.16□□□□□ -0.46
CHD8-203ENST00000553283 ZBTB12Q9Y330 459 aaPredicted RBP12.16□□□□□ -0.46
CHD8-203ENST00000553283 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
CHD8-203ENST00000553283 PSMD14O00487 310 aa12.15□□□□□ -0.46
CHD8-203ENST00000553283 APAF1O14727 1248 aa12.15□□□□□ -0.46
CHD8-203ENST00000553283 RIMBP2O15034 1052 aa12.15□□□□□ -0.46
CHD8-203ENST00000553283 AOC2O75106 756 aa12.15□□□□□ -0.46
CHD8-203ENST00000553283 HSP90B1P14625 803 aaKnown RBP12.15□□□□□ -0.46
CHD8-203ENST00000553283 GNAI1P63096 354 aa12.15□□□□□ -0.46
CHD8-203ENST00000553283 CALD1Q05682 793 aaKnown RBP12.15□□□□□ -0.46
CHD8-203ENST00000553283 TBC1D16Q8TBP0 767 aa12.15□□□□□ -0.46
CHD8-203ENST00000553283 EYA3Q99504 573 aa12.15□□□□□ -0.46
CHD8-203ENST00000553283 PHAXQ9H814 394 aaKnown RBP12.15□□□□□ -0.46
CHD8-203ENST00000553283 LAMB2P55268 1798 aa12.15□□□□□ -0.46
CHD8-203ENST00000553283 DUOX1Q9NRD9 1551 aa12.14□□□□□ -0.47
CHD8-203ENST00000553283 RPS12P25398 132 aaKnown RBP12.14□□□□□ -0.47
CHD8-203ENST00000553283 DOK7Q18PE1 504 aa12.14□□□□□ -0.47
CHD8-203ENST00000553283 SAMD7Q7Z3H4 446 aa12.14□□□□□ -0.47
CHD8-203ENST00000553283 USP48Q86UV5 1035 aa12.14□□□□□ -0.47
CHD8-203ENST00000553283 CCDC191Q8NCU4 936 aa12.14□□□□□ -0.47
CHD8-203ENST00000553283 ZNF408Q9H9D4 720 aa12.14□□□□□ -0.47
CHD8-203ENST00000553283 KCNQ5Q9NR82 932 aa12.14□□□□□ -0.47
CHD8-203ENST00000553283 PODXL2Q9NZ53 605 aa12.14□□□□□ -0.47
CHD8-203ENST00000553283 ECE2O60344 883 aa12.13□□□□□ -0.47
CHD8-203ENST00000553283 TBC1D10BQ4KMP7 808 aaPredicted RBP12.13□□□□□ -0.47
CHD8-203ENST00000553283 C8orf58Q8NAV2 365 aa12.13□□□□□ -0.47
CHD8-203ENST00000553283 ABHD8Q96I13 439 aa12.13□□□□□ -0.47
CHD8-203ENST00000553283 MYD88Q99836 296 aa12.13□□□□□ -0.47
CHD8-203ENST00000553283 CHMP4AQ9BY43 222 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms