RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 C11orf91Q3C1V1 193 aa8.11□□□□□ -1.11
SCFD1-209ENST00000553280 FAM26DQ5JW98 314 aa8.11□□□□□ -1.11
SCFD1-209ENST00000553280 SAMD5Q5TGI4 173 aa8.11□□□□□ -1.11
SCFD1-209ENST00000553280 SLCO4C1Q6ZQN7 724 aa8.11□□□□□ -1.11
SCFD1-209ENST00000553280 C7orf43Q8WVR3 580 aa8.11□□□□□ -1.11
SCFD1-209ENST00000553280 HSH2DQ96JZ2 352 aa8.11□□□□□ -1.11
SCFD1-209ENST00000553280 MARK1Q9P0L2 795 aa8.11□□□□□ -1.11
SCFD1-209ENST00000553280 PRR12Q9ULL5 1215 aa8.11□□□□□ -1.11
SCFD1-209ENST00000553280 ARAFP10398 606 aa8.1□□□□□ -1.11
SCFD1-209ENST00000553280 PCBP4P57723 403 aaKnown RBP8.1□□□□□ -1.11
SCFD1-209ENST00000553280 EHHADHQ08426 723 aa8.1□□□□□ -1.11
SCFD1-209ENST00000553280 GRIN2CQ14957 1233 aa8.1□□□□□ -1.11
SCFD1-209ENST00000553280 NGLY1Q96IV0 654 aa8.1□□□□□ -1.11
SCFD1-209ENST00000553280 LOC105371045A0A1W2PR82 267 aa8.09□□□□□ -1.11
SCFD1-209ENST00000553280 EFSO43281 561 aa8.09□□□□□ -1.11
SCFD1-209ENST00000553280 RECKO95980 971 aa8.09□□□□□ -1.11
SCFD1-209ENST00000553280 FAM182BQ5T319 152 aa8.09□□□□□ -1.11
SCFD1-209ENST00000553280 C1orf53Q5VUE5 145 aa8.09□□□□□ -1.11
SCFD1-209ENST00000553280 ETFBKMTQ8IXQ9 262 aa8.09□□□□□ -1.11
SCFD1-209ENST00000553280 ALKBH8Q96BT7 664 aaKnown RBP8.09□□□□□ -1.11
SCFD1-209ENST00000553280 KLF15Q9UIH9 416 aa8.09□□□□□ -1.11
SCFD1-209ENST00000553280 LDHBP07195 334 aaKnown RBP8.08□□□□□ -1.12
SCFD1-209ENST00000553280 EPXP11678 715 aa8.08□□□□□ -1.12
SCFD1-209ENST00000553280 ADH6P28332 368 aa8.08□□□□□ -1.12
SCFD1-209ENST00000553280 MZF1P28698 734 aaPredicted RBP8.08□□□□□ -1.12
SCFD1-209ENST00000553280 USP5P45974 858 aa8.08□□□□□ -1.12
SCFD1-209ENST00000553280 SFSWAPQ12872 951 aaKnown RBP8.08□□□□□ -1.12
SCFD1-209ENST00000553280 DGKZQ13574 1117 aa8.08□□□□□ -1.12
SCFD1-209ENST00000553280 MRPL58Q14197 206 aaKnown RBP8.08□□□□□ -1.12
SCFD1-209ENST00000553280 ATCAYQ86WG3 371 aa8.08□□□□□ -1.12
SCFD1-209ENST00000553280 ZNF280CQ8ND82 737 aa8.08□□□□□ -1.12
SCFD1-209ENST00000553280 IFT43Q96FT9 208 aa8.08□□□□□ -1.12
SCFD1-209ENST00000553280 GPR182O15218 404 aa8.07□□□□□ -1.12
SCFD1-209ENST00000553280 PRPF40AO75400 957 aaKnown RBP8.07□□□□□ -1.12
SCFD1-209ENST00000553280 GPAT2Q6NUI2 795 aa8.07□□□□□ -1.12
SCFD1-209ENST00000553280 FCHSD1Q86WN1 690 aa8.07□□□□□ -1.12
SCFD1-209ENST00000553280 GJD3Q8N144 294 aa8.07□□□□□ -1.12
SCFD1-209ENST00000553280 BTBD6Q96KE9 485 aa8.07□□□□□ -1.12
SCFD1-209ENST00000553280 CEP63Q96MT8 703 aa8.07□□□□□ -1.12
SCFD1-209ENST00000553280 BACH2Q9BYV9 841 aa8.07□□□□□ -1.12
SCFD1-209ENST00000553280 POLIQ9UNA4 740 aa8.07□□□□□ -1.12
SCFD1-209ENST00000553280 GPC6Q9Y625 555 aaPredicted RBP8.07□□□□□ -1.12
SCFD1-209ENST00000553280 MAPK8P45983 427 aa8.06□□□□□ -1.12
SCFD1-209ENST00000553280 LAMC2Q13753 1193 aa8.06□□□□□ -1.12
SCFD1-209ENST00000553280 TSNAXIP1Q2TAA8 658 aa8.06□□□□□ -1.12
SCFD1-209ENST00000553280 ZNF468Q5VIY5 522 aaPredicted RBP8.06□□□□□ -1.12
SCFD1-209ENST00000553280 DCAF5Q96JK2 942 aa8.06□□□□□ -1.12
SCFD1-209ENST00000553280 SUSD3Q96L08 255 aa8.06□□□□□ -1.12
SCFD1-209ENST00000553280 KLK14Q9P0G3 267 aa8.06□□□□□ -1.12
SCFD1-209ENST00000553280 MKL2Q9ULH7 1088 aa8.06□□□□□ -1.12
SCFD1-209ENST00000553280 ZAP70P43403 619 aa8.05□□□□□ -1.12
SCFD1-209ENST00000553280 XPCQ01831 940 aaPredicted RBP8.05□□□□□ -1.12
SCFD1-209ENST00000553280 DNM1Q05193 864 aaKnown RBP8.05□□□□□ -1.12
SCFD1-209ENST00000553280 RAB44Q7Z6P3 723 aaPredicted RBP8.05□□□□□ -1.12
SCFD1-209ENST00000553280 SYT9Q86SS6 491 aa8.05□□□□□ -1.12
SCFD1-209ENST00000553280 SLC30A3Q99726 388 aa8.05□□□□□ -1.12
SCFD1-209ENST00000553280 NIF3L1Q9GZT8 377 aa8.05□□□□□ -1.12
SCFD1-209ENST00000553280 BRD7Q9NPI1 651 aa8.05□□□□□ -1.12
SCFD1-209ENST00000553280 USP35Q9P2H5 1018 aa8.05□□□□□ -1.12
SCFD1-209ENST00000553280 PARP2Q9UGN5 583 aa8.05□□□□□ -1.12
SCFD1-209ENST00000553280 SHROOM4Q9ULL8 1493 aa8.05□□□□□ -1.12
SCFD1-209ENST00000553280 PDGFAP04085 211 aa8.04□□□□□ -1.12
SCFD1-209ENST00000553280 HOXB4P17483 251 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-209ENST00000553280 ITGAEP38570 1179 aa8.04□□□□□ -1.12
SCFD1-209ENST00000553280 LDLRAD1Q5T700 205 aa8.04□□□□□ -1.12
SCFD1-209ENST00000553280 CHSY3Q70JA7 882 aa8.04□□□□□ -1.12
SCFD1-209ENST00000553280 EDEM1Q92611 657 aa8.04□□□□□ -1.12
SCFD1-209ENST00000553280 C8orf37Q96NL8 207 aa8.04□□□□□ -1.12
SCFD1-209ENST00000553280 DUSP9Q99956 384 aaKnown RBP8.04□□□□□ -1.12
SCFD1-209ENST00000553280 AVENQ9NQS1 362 aaPredicted RBP8.04□□□□□ -1.12
SCFD1-209ENST00000553280 ANKIB1Q9P2G1 1089 aa8.04□□□□□ -1.12
SCFD1-209ENST00000553280 SCAMP3O14828 347 aaKnown RBP8.03□□□□□ -1.12
SCFD1-209ENST00000553280 ATP2B2Q01814 1243 aa8.03□□□□□ -1.12
SCFD1-209ENST00000553280 TYRO3Q06418 890 aa8.03□□□□□ -1.12
SCFD1-209ENST00000553280 ENOX2Q16206 610 aaKnown RBP8.03□□□□□ -1.12
SCFD1-209ENST00000553280 TMC4Q7Z404 712 aa8.03□□□□□ -1.12
SCFD1-209ENST00000553280 TREML1Q86YW5 311 aa8.03□□□□□ -1.12
SCFD1-209ENST00000553280 SUV39H2Q9H5I1 410 aa8.03□□□□□ -1.12
SCFD1-209ENST00000553280 WWC3Q9ULE0 1092 aa8.03□□□□□ -1.12
SCFD1-209ENST00000553280 LOC100996750A0A140TA64 210 aa8.02□□□□□ -1.13
SCFD1-209ENST00000553280 PCSK2P16519 638 aa8.02□□□□□ -1.13
SCFD1-209ENST00000553280 DAB2P98082 770 aa8.02□□□□□ -1.13
SCFD1-209ENST00000553280 SPEM2Q0P670 501 aa8.02□□□□□ -1.13
SCFD1-209ENST00000553280 ALG1LQ6GMV1 187 aa8.02□□□□□ -1.13
SCFD1-209ENST00000553280 LINC00114Q6XXX2 140 aa8.02□□□□□ -1.13
SCFD1-209ENST00000553280 KRTAP4-6Q9BYQ5 205 aa8.02□□□□□ -1.13
SCFD1-209ENST00000553280 RPLP1P05386 114 aaKnown RBP8.01□□□□□ -1.13
SCFD1-209ENST00000553280 COL8A1P27658 744 aa8.01□□□□□ -1.13
SCFD1-209ENST00000553280 DGKGP49619 791 aa8.01□□□□□ -1.13
SCFD1-209ENST00000553280 HIF1AQ16665 826 aa8.01□□□□□ -1.13
SCFD1-209ENST00000553280 PLA2G4EQ3MJ16 856 aa8.01□□□□□ -1.13
SCFD1-209ENST00000553280 FAM13BQ9NYF5 915 aa8.01□□□□□ -1.13
SCFD1-209ENST00000553280 KCNH4Q9UQ05 1017 aa8.01□□□□□ -1.13
SCFD1-209ENST00000553280 BCS1LQ9Y276 419 aa8.01□□□□□ -1.13
SCFD1-209ENST00000553280 SORBS3O60504 671 aa8□□□□□ -1.13
SCFD1-209ENST00000553280 MICAL2O94851 1124 aa8□□□□□ -1.13
SCFD1-209ENST00000553280 ZC3H6P61129 1189 aaKnown RBP8□□□□□ -1.13
SCFD1-209ENST00000553280 BTLAQ7Z6A9 289 aa8□□□□□ -1.13
SCFD1-209ENST00000553280 GPR152Q8TDT2 470 aa8□□□□□ -1.13
SCFD1-209ENST00000553280 FAM161BQ96MY7 647 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms