RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 MPNDQ8N594 471 aa20.45■□□□□ 0.86
CDK4-215ENST00000553237 ZBTB38Q8NAP3 1195 aaPredicted RBP20.45■□□□□ 0.86
CDK4-215ENST00000553237 METTL22Q9BUU2 404 aaPredicted RBP20.45■□□□□ 0.86
CDK4-215ENST00000553237 STK31Q9BXU1 1019 aa20.45■□□□□ 0.86
CDK4-215ENST00000553237 EAPPQ56P03 285 aaPredicted RBP20.44■□□□□ 0.86
CDK4-215ENST00000553237 CHADLQ6NUI6 762 aa20.44■□□□□ 0.86
CDK4-215ENST00000553237 NIM1KQ8IY84 436 aa20.44■□□□□ 0.86
CDK4-215ENST00000553237 GPC2Q8N158 579 aa20.44■□□□□ 0.86
CDK4-215ENST00000553237 CELF1Q92879 486 aaKnown RBP20.44■□□□□ 0.86
CDK4-215ENST00000553237 HACL1Q9UJ83 578 aa20.44■□□□□ 0.86
CDK4-215ENST00000553237 MAP3K2Q9Y2U5 619 aa20.44■□□□□ 0.86
CDK4-215ENST00000553237 G2E3Q7L622 706 aa20.43■□□□□ 0.86
CDK4-215ENST00000553237 WDR63Q8IWG1 891 aa20.43■□□□□ 0.86
CDK4-215ENST00000553237 CCDC191Q8NCU4 936 aa20.43■□□□□ 0.86
CDK4-215ENST00000553237 CWC25Q9NXE8 425 aaPredicted RBP20.43■□□□□ 0.86
CDK4-215ENST00000553237 FANCIQ9NVI1 1328 aa20.43■□□□□ 0.86
CDK4-215ENST00000553237 TAF1P21675 1872 aa20.42■□□□□ 0.86
CDK4-215ENST00000553237 PI4KAP2A4QPH2 592 aa20.42■□□□□ 0.86
CDK4-215ENST00000553237 SLC4A2P04920 1241 aa20.42■□□□□ 0.86
CDK4-215ENST00000553237 EPHX2P34913 555 aa20.42■□□□□ 0.86
CDK4-215ENST00000553237 KSR2Q6VAB6 950 aa20.42■□□□□ 0.86
CDK4-215ENST00000553237 PI4KAP1Q8N8J0 262 aa20.42■□□□□ 0.86
CDK4-215ENST00000553237 SUPT20HQ8NEM7 779 aa20.42■□□□□ 0.86
CDK4-215ENST00000553237 RTFDC1Q9BY42 306 aaPredicted RBP20.42■□□□□ 0.86
CDK4-215ENST00000553237 DDX60Q8IY21 1712 aaKnown RBP20.41■□□□□ 0.86
CDK4-215ENST00000553237 CLEC11AQ9Y240 323 aa20.41■□□□□ 0.86
CDK4-215ENST00000553237 PCCAP05165 728 aaPredicted RBP20.4■□□□□ 0.86
CDK4-215ENST00000553237 TMC4Q7Z404 712 aa20.4■□□□□ 0.86
CDK4-215ENST00000553237 LDHDQ86WU2 507 aa20.4■□□□□ 0.86
CDK4-215ENST00000553237 KLRG1Q96E93 195 aa20.4■□□□□ 0.86
CDK4-215ENST00000553237 VPS33BQ9H267 617 aa20.4■□□□□ 0.86
CDK4-215ENST00000553237 SPINK5Q9NQ38 1064 aaPredicted RBP20.4■□□□□ 0.86
CDK4-215ENST00000553237 IGKV5-2P06315 115 aa20.39■□□□□ 0.85
CDK4-215ENST00000553237 EXOSC9Q06265 439 aaKnown RBP20.39■□□□□ 0.85
CDK4-215ENST00000553237 CCDC85AQ96PX6 553 aaPredicted RBP20.39■□□□□ 0.85
CDK4-215ENST00000553237 SEC31BQ9NQW1 1179 aa20.39■□□□□ 0.85
CDK4-215ENST00000553237 NSFL1CQ9UNZ2 370 aaKnown RBP20.39■□□□□ 0.85
CDK4-215ENST00000553237 VAMP4O75379 141 aa20.38■□□□□ 0.85
CDK4-215ENST00000553237 HSP90B1P14625 803 aaKnown RBP20.38■□□□□ 0.85
CDK4-215ENST00000553237 RPS8P62241 208 aaKnown RBP20.38■□□□□ 0.85
CDK4-215ENST00000553237 ZNRF3Q9ULT6 936 aa20.38■□□□□ 0.85
CDK4-215ENST00000553237 SCN4AP35499 1836 aa20.38■□□□□ 0.85
CDK4-215ENST00000553237 PDE8AO60658 829 aa20.37■□□□□ 0.85
CDK4-215ENST00000553237 LMOD1P29536 600 aaPredicted RBP20.37■□□□□ 0.85
CDK4-215ENST00000553237 CXCL9Q07325 125 aa20.37■□□□□ 0.85
CDK4-215ENST00000553237 KIAA2012Q0VF49 1180 aa20.37■□□□□ 0.85
CDK4-215ENST00000553237 NEXNQ0ZGT2 675 aa20.37■□□□□ 0.85
CDK4-215ENST00000553237 CWF19L2Q2TBE0 894 aaKnown RBP20.37■□□□□ 0.85
CDK4-215ENST00000553237 COL4A1P02462 1669 aa20.36■□□□□ 0.85
CDK4-215ENST00000553237 EPS15P42566 896 aa20.36■□□□□ 0.85
CDK4-215ENST00000553237 SCNN1DP51172 638 aa20.36■□□□□ 0.85
CDK4-215ENST00000553237 GPSM2P81274 684 aa20.36■□□□□ 0.85
CDK4-215ENST00000553237 FLIIQ13045 1269 aa20.36■□□□□ 0.85
CDK4-215ENST00000553237 CCDC152Q4G0S7 254 aa20.36■□□□□ 0.85
CDK4-215ENST00000553237 PNMA8AQ86V59 439 aaPredicted RBP20.36■□□□□ 0.85
CDK4-215ENST00000553237 C6orf229H3BNL8 230 aa20.35■□□□□ 0.85
CDK4-215ENST00000553237 RAD17O75943 681 aa20.35■□□□□ 0.85
CDK4-215ENST00000553237 NEURL1BA8MQ27 555 aa20.34■□□□□ 0.85
CDK4-215ENST00000553237 RIMBP2O15034 1052 aa20.34■□□□□ 0.85
CDK4-215ENST00000553237 FKBP5Q13451 457 aaPredicted RBP20.34■□□□□ 0.85
CDK4-215ENST00000553237 WASHC4Q2M389 1173 aa20.34■□□□□ 0.85
CDK4-215ENST00000553237 MAP1SQ66K74 1059 aaPredicted RBP20.34■□□□□ 0.85
CDK4-215ENST00000553237 POLLQ9UGP5 575 aa20.34■□□□□ 0.85
CDK4-215ENST00000553237 ITGBL1O95965 494 aaPredicted RBP20.33■□□□□ 0.85
CDK4-215ENST00000553237 CIAPIN1Q6FI81 312 aa20.33■□□□□ 0.85
CDK4-215ENST00000553237 GPR101Q96P66 508 aaPredicted RBP20.33■□□□□ 0.85
CDK4-215ENST00000553237 MYH16Q9H6N6 1097 aa20.33■□□□□ 0.85
CDK4-215ENST00000553237 CDHR2Q9BYE9 1310 aa20.32■□□□□ 0.84
CDK4-215ENST00000553237 YDJCA8MPS7 323 aa20.32■□□□□ 0.84
CDK4-215ENST00000553237 CNTROBQ8N137 903 aa20.32■□□□□ 0.84
CDK4-215ENST00000553237 DUOX1Q9NRD9 1551 aa20.32■□□□□ 0.84
CDK4-215ENST00000553237 PASKQ96RG2 1323 aa20.31■□□□□ 0.84
CDK4-215ENST00000553237 LTBP1Q14766 1721 aa20.31■□□□□ 0.84
CDK4-215ENST00000553237 GMPSP49915 693 aaPredicted RBP20.31■□□□□ 0.84
CDK4-215ENST00000553237 CTSWP56202 376 aa20.31■□□□□ 0.84
CDK4-215ENST00000553237 UBE3BQ7Z3V4 1068 aa20.31■□□□□ 0.84
CDK4-215ENST00000553237 JMYQ8N9B5 988 aa20.31■□□□□ 0.84
CDK4-215ENST00000553237 TBC1D16Q8TBP0 767 aa20.31■□□□□ 0.84
CDK4-215ENST00000553237 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
CDK4-215ENST00000553237 DBNDD1Q9H9R9 158 aa20.31■□□□□ 0.84
CDK4-215ENST00000553237 CREBZFQ9NS37 354 aa20.31■□□□□ 0.84
CDK4-215ENST00000553237 GPRC5DQ9NZD1 345 aa20.31■□□□□ 0.84
CDK4-215ENST00000553237 H7C1W4 665 aa20.3■□□□□ 0.84
CDK4-215ENST00000553237 TNIP1Q15025 636 aa20.3■□□□□ 0.84
CDK4-215ENST00000553237 DOK7Q18PE1 504 aa20.3■□□□□ 0.84
CDK4-215ENST00000553237 ANKRD18AQ8IVF6 992 aa20.3■□□□□ 0.84
CDK4-215ENST00000553237 TTLL11Q8NHH1 800 aa20.3■□□□□ 0.84
CDK4-215ENST00000553237 EYA3Q99504 573 aa20.3■□□□□ 0.84
CDK4-215ENST00000553237 BCL2L13Q9BXK5 485 aa20.3■□□□□ 0.84
CDK4-215ENST00000553237 ANKIB1Q9P2G1 1089 aa20.3■□□□□ 0.84
CDK4-215ENST00000553237 LRRC37AA6NMS7 1700 aa20.3■□□□□ 0.84
CDK4-215ENST00000553237 GCKRQ14397 625 aa20.29■□□□□ 0.84
CDK4-215ENST00000553237 USP50Q70EL3 339 aaPredicted RBP20.29■□□□□ 0.84
CDK4-215ENST00000553237 MKRN1Q9UHC7 482 aaKnown RBP20.29■□□□□ 0.84
CDK4-215ENST00000553237 F6X3S4 739 aa20.28■□□□□ 0.84
CDK4-215ENST00000553237 UFL1O94874 794 aa20.28■□□□□ 0.84
CDK4-215ENST00000553237 ZC3H12CQ9C0D7 883 aaKnown RBP20.28■□□□□ 0.84
CDK4-215ENST00000553237 GREM2Q9H772 168 aa20.28■□□□□ 0.84
CDK4-215ENST00000553237 ADARB2Q9NS39 739 aaKnown RBP20.28■□□□□ 0.84
CDK4-215ENST00000553237 ADAMTSL1Q8N6G6 1762 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms